How Chemoproteomics Can Enable Drug Discovery and Development

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How Chemoproteomics Can Enable Drug Discovery and Development Raymond E. Moellering, Benjamin F. Cravatt  Chemistry & Biology  Volume 19, Issue 1, Pages 11-22 (January 2012) DOI: 10.1016/j.chembiol.2012.01.001 Copyright © 2012 Elsevier Ltd Terms and Conditions

Figure 1 The Metabolic Serine Hydrolases as a Case Study for the Druggable, but Not Yet-Drugged Proteome (A) Tree diagram showing the ∼115 human metabolic serine hydrolases. Enzymes possessing proof-of-relevance chemical probes developed prior to the application of ABPP to serine hydrolases are marked with red arrows. Enzymes with proof-of-relevance probes discovered with ABPP platforms are marked with blue arrows. (B) Chart displaying metabolic serine hydrolases as a function of number of scientific publications, where enzymes possessing proof-of-relevance chemical probes developed prior to or with the use of ABPP are marked in red and blue, respectively. Blue arrows are used to mark poorly characterized enzymes with low publication number for which ABPP has generated proof-of-relevance probes. Chemistry & Biology 2012 19, 11-22DOI: (10.1016/j.chembiol.2012.01.001) Copyright © 2012 Elsevier Ltd Terms and Conditions

Figure 2 Representative Chemoproteomic Platforms for Drug Discovery and Development (A) Competitive ABPP for high-throughput screening of small-molecule libraries using fluorescence polarization (fluopol) for hit discovery and gel-based selectivity profiling in proteomes for hit prioritization. (B) SILAC-ABPP for quantitative assessment of inhibitor selectivity in proteomes. (C) Affinity enrichment combined with SILAC to quantify small-molecule-interacting proteins from native proteomes. Chemistry & Biology 2012 19, 11-22DOI: (10.1016/j.chembiol.2012.01.001) Copyright © 2012 Elsevier Ltd Terms and Conditions

Figure 3 How Chemoproteomics Can Enable Drug Discovery and Development from the Earliest Stages of Target and Lead Compound Discovery through Lead Optimization and Biomarker Assays in Preclinical and Clinical Development Shown are ways that chemoproteomics can assist the drug discovery and development process from early stage target and lead compound discovery through lead optimization and biomarker analysis in preclinical and clinical development. Chemistry & Biology 2012 19, 11-22DOI: (10.1016/j.chembiol.2012.01.001) Copyright © 2012 Elsevier Ltd Terms and Conditions