Biology/Chemistry of Protein Structure

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Presentation transcript:

Biology/Chemistry of Protein Structure Primary Secondary Tertiary Quaternary Assembly Folding Packing Interaction S T R U C T U R E P R O C E S S

Protein Assembly occurs at the ribosome involves dehydration synthesis and polymerization of amino acids attached to tRNA: NH - {A + B  A-B + H O} -COO thermodynamically unfavorable, with E = +10kJ/mol, thus coupled to reactions that act as sources of free energy yields primary structure 2 n 3 + -

Protein Folding - Secondary occurs in the cytosol involves localized spatial interaction among primary structure elements, i.e. the amino acids may or may not involve chaperone proteins formed and stabilized by hydrogen bonding, electrostatic and van der Waals interactions

Tertiary Structure non-linear 3 dimensional formed and stabilized by hydrogen bonding, covalent (e.g. disulfide) bonding, hydrophobic packing toward core and hydrophilic exposure to solvent A globular amino acid polymer folded and compacted is somewhat functional (catalytic) and energetically favorable  interaction!

Quaternary Structure non-linear, 3 dimensional Occurs in cytosol formed by hydrogen bonding, covalent bonding, hydrophobic packing and hydrophilic exposure involves interaction among tertiary structure elements of separate polymer chains