Detection of Mycobacterium chelonae, Mycobacterium abscessus Group, and Mycobacterium fortuitum Complex by a Multiplex Real-Time PCR Directly from Clinical.

Slides:



Advertisements
Similar presentations
Measurement of Relative Copy Number of CDKN2A/ARF and CDKN2B in Bladder Cancer by Real-Time Quantitative PCR and Multiplex Ligation-Dependent Probe Amplification.
Advertisements

Nine Novel Germline Gene Variants in the RET Proto-Oncogene Identified in Twelve Unrelated Cases Syed A. Ahmed, Karen Snow-Bailey, W. Edward Highsmith,
Development of a Novel One-Tube Isothermal Reverse Transcription Thermophilic Helicase-Dependent Amplification Platform for Rapid RNA Detection James Goldmeyer,
Telomerase Activity and Expression of Telomerase RNA Component and Telomerase Catalytic Subunit Gene in Cervical Cancer Kenji Nakano, Elizabeth Watney,
CyclinD1/CyclinD3 Ratio by Real-Time PCR Improves Specificity for the Diagnosis of Mantle Cell Lymphoma Carol D. Jones, Katherine H. Darnell, Roger A.
Quantification of Parvovirus B19 DNA Using COBAS AmpliPrep Automated Sample Preparation and LightCycler Real-Time PCR Stefan Schorling, Gunnar Schalasta,
Design and Multiseries Validation of a Web-Based Gene Expression Assay for Predicting Breast Cancer Recurrence and Patient Survival Ryan K. Van Laar The.
1Department of Esoteric Testing/R&D, Tampa General Hospital, Tampa, FL
The Application of Molecular Diagnostics to Stained Cytology Smears
In Silico Proficiency Testing for Clinical Next-Generation Sequencing
Multiplex Detection of Ehrlichia and Anaplasma Species Pathogens in Peripheral Blood by Real-Time Reverse Transcriptase-Polymerase Chain Reaction  Kamesh.
Real-Time Polymerase Chain Reaction for Detecting Bacterial DNA Directly from Blood of Neonates Being Evaluated for Sepsis  Jeanne A. Jordan, Mary Beth.
Laboratory Guidelines for Detection, Interpretation, and Reporting of Maternal Cell Contamination in Prenatal Analyses  Narasimhan Nagan, Nicole E. Faulkner,
Establishment and Study of Different Real-Time Polymerase Chain Reaction Assays for the Quantification of Cells with Deletions of Chromosome 7  Elia Mattarucchi,
A DNA Real-Time Quantitative PCR Method Suitable for Routine Monitoring of Low Levels of Minimal Residual Disease in Chronic Myeloid Leukemia  Paul A.
Detection of Cytomegalovirus in Whole Blood Using Three Different Real-Time PCR Chemistries  Erica Vincent, Zhengming Gu, Markus Morgenstern, Candace.
Development and Evaluation of a Multiplex Real-Time Polymerase Chain Reaction Procedure to Clinically Type Prevalent Salmonella enterica Serovars  Nélida.
Joanna Wang, Chetan Bettegowda  The Journal of Molecular Diagnostics 
Multi-Probe Real-Time PCR Identification of Common Mycobacterium Species in Blood Culture Broth  Suporn Foongladda, Suporn Pholwat, Boonchuay Eampokalap,
Maxim B. Freidin, Neesa Bhudia, Eric Lim, Andrew G
The Effect of Primer-Template Mismatches on the Detection and Quantification of Nucleic Acids Using the 5′ Nuclease Assay  Ralph Stadhouders, Suzan D.
Development and Evaluation of a Pan-Sarcoma Fusion Gene Detection Assay Using the NanoString nCounter Platform  Kenneth T.E. Chang, Angela Goytain, Tracy.
Quantitative mRNA Expression Analysis from Formalin-Fixed, Paraffin-Embedded Tissues Using 5′ Nuclease Quantitative Reverse Transcription-Polymerase Chain.
Characterization of the Different BCR-ABL Transcripts with a Single Multiplex RT-PCR  Jacques Chasseriau, Jérôme Rivet, Frédéric Bilan, Jean-Claude Chomel,
Jeung-Yeal Ahn, Katie Seo, Olga Weinberg, Scott D. Boyd, Daniel A
Ken B. Waites, Li Xiao, Vanya Paralanov, Rose M. Viscardi, John I
Single-Run, Parallel Detection of DNA from Three Pneumonia-Producing Bacteria by Real-Time Polymerase Chain Reaction  Reinhard B. Raggam, Eva Leitner,
A Lean Laboratory The Journal of Molecular Diagnostics
Linda Chui, Marc R. Couturier, Theodore Chiu, Gehua Wang, Adam B
Getting Things Backwards to Prevent Primer Dimers
Patrick R. Murray  The Journal of Molecular Diagnostics 
William L. Gerald, M.D., Ph.D, 1954–2008
Christine L. Baker, Cecily P. Vaughn, Wade S. Samowitz 
Detection and Typing of Viruses Using Broadly Sensitive Cocktail-PCR and Mass Spectrometric Cataloging  Charul Gijavanekar, Rafal Drabek, Mithil Soni,
Real-Time Polymerase Chain Reaction for Detecting Bacterial DNA Directly from Blood of Neonates Being Evaluated for Sepsis  Jeanne A. Jordan, Mary Beth.
A Novel and Reliable Method to Detect Microsatellite Instability in Colorectal Cancer by Next-Generation Sequencing  Lizhen Zhu, Yanqin Huang, Xuefeng.
Improved Real-Time Multiplex Polymerase Chain Reaction Detection of Methylenetetrahydrofolate Reductase (MTHFR) 677C>T and 1298A>C Polymorphisms Using.
Development and Clinical Implementation of a Combination Deletion PCR and Multiplex Ligation-Dependent Probe Amplification Assay for Detecting Deletions.
Benjamin P. Song, Surbhi Jain, Selena Y. Lin, Quan Chen, Timothy M
Olivier Gruselle, Thierry Coche, Jamila Louahed 
BRAF Mutation Testing in Solid Tumors
Development of a Quantitative Real-Time Polymerase Chain Reaction Assay for the Detection of the JAK2 V617F Mutation  Elizabeth C. Wolstencroft, Katy.
Multiplex Bead Suspension Array for Screening Neisseria gonorrhoeae Antibiotic Resistance Genetic Determinants in Noncultured Clinical Samples  Sergey.
The Molecular Pathology of Primary Immunodeficiencies
Modified Real-Time PCR for Detecting, Differentiating, and Quantifying Ureaplasma urealyticum and Ureaplasma parvum  Ellen Vancutsem, Oriane Soetens,
Report of New Haplotype for ABCC2 Gene
Development and Laboratory Evaluation of a Real-Time PCR Assay for Detecting Viruses and Bacteria of Relevance for Community-Acquired Pneumonia  Alicia.
Diagnosis of Trypanosomatid Infections
An Allele-Specific PCR System for Rapid Detection and Discrimination of the CYP2C19∗4A, ∗4B, and ∗17 Alleles  Stuart A. Scott, Qian Tan, Usman Baber,
Evaluating the Effect of Unclassified Variants Identified in MMR Genes Using Phenotypic Features, Bioinformatics Prediction, and RNA Assays  Lucia Pérez-Cabornero,
Jianbo Song, Danielle Mercer, Xiaofeng Hu, Henry Liu, Marilyn M. Li 
Analytical Validation of a Personalized Medicine APOL1 Genotyping Assay for Nondiabetic Chronic Kidney Disease Risk Assessment  Jinglan Zhang, Anastasia.
Rapid and Sensitive Real-Time Polymerase Chain Reaction Method for Detection and Quantification of 3243A>G Mitochondrial Point Mutation  Rinki Singh,
Processed Pseudogene Confounding Deletion/Duplication Assays for SMAD4
Multiplex PCR Detection of GSTM1, GSTT1, and GSTP1 Gene Variants
Inherited Cardiomyopathies
Danielle C. Smith, Alina Esterhuizen, Jacquie Greenberg 
Cecily P. Vaughn, Elaine Lyon, Wade S. Samowitz 
Rapid Polymerase Chain Reaction-Based Detection of Epidermal Growth Factor Receptor Gene Mutations in Lung Adenocarcinomas  Qiulu Pan, William Pao, Marc.
Detection and Quantification of BCR-ABL1 Fusion Transcripts by Droplet Digital PCR  Lawrence J. Jennings, David George, Juliann Czech, Min Yu, Loren Joseph 
Optimized Allele-Specific Real-Time PCR Assays for the Detection of Common Mutations in KRAS and BRAF  Alois H. Lang, Heinz Drexel, Simone Geller-Rhomberg,
Karen Snow-Bailey, Ph.D., 1961–2006
Custom Design of a GeXP Multiplexed Assay Used to Assess Expression Profiles of Inflammatory Gene Targets in Normal Colon, Polyp, and Tumor Tissue  Janice.
Establishment of a Molecular Diagnostic System for Spinal Muscular Atrophy  Jian Zeng, Yanhong Lin, Aizhen Yan, Longfeng Ke, Zhongyong Zhu, Fenghua Lan 
Clinical Experience with the Cervista HPV HR Assay
Angiotensin I-Converting Enzyme
Monique A. Johnson, Marvin J. Yoshitomi, C. Sue Richards 
J. Esteban, A. Molleja, F. Cabria, M. Soledad Jimenez 
Optimized Allele-Specific Real-Time PCR Assays for the Detection of Common Mutations in KRAS and BRAF  Alois H. Lang, Heinz Drexel, Simone Geller-Rhomberg,
The History and Impact of Molecular Coding Changes on Coverage and Reimbursement of Molecular Diagnostic Tests  Susan J. Hsiao, Mahesh M. Mansukhani,
Presentation transcript:

Detection of Mycobacterium chelonae, Mycobacterium abscessus Group, and Mycobacterium fortuitum Complex by a Multiplex Real-Time PCR Directly from Clinical Samples Using the BD MAX System  Talita T. Rocchetti, Suzane Silbert, Alicia Gostnell, Carly Kubasek, Antonio C. Campos Pignatari, Raymond Widen  The Journal of Molecular Diagnostics  Volume 19, Issue 2, Pages 295-302 (March 2017) DOI: 10.1016/j.jmoldx.2016.10.004 Copyright © 2017 American Society for Investigative Pathology and the Association for Molecular Pathology Terms and Conditions

Figure 1 A: Set of common primer forward (PF) and primer reverse (PR) and specific probe (Pb) CY5 for Mycobacterium chelonae (MC) and JOE for Mycobacterium abscessus group (MAG) (subspecies abscessus, massiliense, and bolletii) designed using internal transcribed spacer sequence (ITS) gene. B: Set of primer forward 1 (PF1) for Mycobacterium porcinum, Mycobacterium houstonense, Mycobacterium senegalense, Mycobacterium farcinogenes, and Mycobacterium boenickei; primer forward 2 (PF2) for Mycobacterium fortuitum, Mycobacterium peregrinum, Mycobacterium neworleansense, Mycobacterium septicum, and Mycobacterium alvei; primer reverse (PR) and specific probe (Pb) for M. fortuitum complex (MFC) designed using β subunit of bacterial RNA polymerase (rpoB) gene. The Journal of Molecular Diagnostics 2017 19, 295-302DOI: (10.1016/j.jmoldx.2016.10.004) Copyright © 2017 American Society for Investigative Pathology and the Association for Molecular Pathology Terms and Conditions