Mutagenesis efficiency of different mariner kanamycin vectors in magic pool. Mutagenesis efficiency of different mariner kanamycin vectors in magic pool.

Slides:



Advertisements
Similar presentations
T-DNA Mutagenesis T-DNA Mutagenesis. Transfer-DNA Mutagenesis: a chemical or physical treatment that creates changes in DNA sequence which can lead to.
Advertisements

MGH-PGA Genomic Analysis of Stress and Inflammation: Pseudomonas aeruginosa Strain PA14 Non-Redundant Mutant Library Nicole T. Liberati, Dan G. Lee, Jacinto.
1 times table 2 times table 3 times table 4 times table 5 times table
14.5L/9.5DTime7:00- 9:00 9:00- 11:00 11:00- 15:00 15:00- 17:00 17:00- 19:00 19:00- 21:00 21:00- 23:00 23:00- 5:00 5:00- 7:00 Temperature
Forward genetics and reverse genetics
GABI-KAT system Plasmid map of pAC161 used for tagging. Map of the binary transformation vector pAC161 that contains the SULr ORF (for resistance against.
Thursday 23 rd April 2009 Paradise Lost 6 – My Perfect Holiday.
No natural recombination system present (genes are not expressed) our attempts: Does recombination work in spite of the missing recombination system? Does.
$100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300.
Tables Learning Support
Table Amortized cost: $3 Insert 5 Actual cost: $1.
Hire Toyota Innova in Delhi for Outstation Tour
Times Tables.
16S rRNA gene abundance and total gene expression of Tannerella species in healthy patient and periodontitis patient samples. 16S rRNA gene abundance and.
ROTATION ROTATION ROTATION ROTATION ROTATION Pamela Leutwyler.
Authors’ names to be inserted here, one or two lines in total
Correlation between the ability of Novosphingobium strains from four different habitats to degrade aromatic and xenobiotic compounds. Correlation between.
STUDY NAME TO BE PLACED UP HERE IN THE POSTER, PROBABLY WITH TWO TO FOUR LINES IN TOTAL OF THIS POSTER TEMPLATE FOR IDCCM USING POWERPOINT Add other.
Benchmarks of OTU picking tools on natural communities.
Distribution of single nucleotide variants (SNVs) for each virus and for two Ebola virus strains. Distribution of single nucleotide variants (SNVs) for.
Supplemental Tables/Figures
 Design and use of a high-throughput screen to identify tumor cell-induced gene activation events in Salmonella.  Design and use of a high-throughput screen.
H-NS2 is upregulated in an hns mutant derivative of the strain E
Authors’ names to be inserted here, one or two lines in total
Transcriptomic and proteomic data sets available in the Listeriomics database. Transcriptomic and proteomic data sets available in the Listeriomics database.
The SOP generates high-quality full-genome sequence data across multiple ssRNA+ virus families. The SOP generates high-quality full-genome sequence data.
Heat maps of stress- and development-related genes differentially expressed between the osdR mutant and its parent, S. coelicolor M145. Heat maps of stress-
Selected KEGG genes that were significantly more abundant (>2 log2-fold change; FDR-adjusted P < 0.005) in plastic-associated metagenomic libraries than.
Gene content and order of the clade B-specific GT-rich gene cluster.
Golden Gate assembly of transposon delivery vectors from part vectors.
H-NS2-FLAG expression is upregulated in DMEM and M9 minimal medium and when cells enter the stationary growth phase. H-NS2-FLAG expression is upregulated.
Revolutionize Genetic Studies and Crop Improvement with High-Throughput and Genome-Scale CRISPR/Cas9 Gene Editing Technology  Ning Yang, Rongchen Wang,
Vectors for CRISPR mutagenesis in Candida albicans, Candida glabrata, Naumovozyma castellii, and Saccharomyces cerevisiae. Vectors for CRISPR mutagenesis.
Heatmaps of differential OTUs
Characterization of differentially expressed proteins based on their COG classification. Characterization of differentially expressed proteins based on.
Functional prediction of unknown proteins in S. pneumoniae.
Overview of the magic pool strategy.
(A) Scale map of connections between contigs in Ver_v2 suggested by the alignment of paired-end Illumina reads (insert size, ~300 bp). (A) Scale map of.
Outgrowth of passaged strains.
Effect of dinB gene deletion on the frequency of spontaneously arisen TetR mutants in different genetic backgrounds. Effect of dinB gene deletion on the.
Growth kinetics of recA, yeiH, asr, srlE, and manY deletion strains compared to wild-type parent E. coli BW Growth kinetics of recA, yeiH, asr, srlE,
Romain Gallet et al. BTS 2016;1:14-28
Genome-wide Targeted Mutagenesis in Rice Using the CRISPR/Cas9 System
3 times tables.
6 times tables.
Transcription of cellulolytic genes disaggregated by genome.
Molecular network analysis of UPLC-Q-TOF MS2 data.
Physiological consequences of DicF-xylR mRNA interactions.
RNA-seq of Glutamicibacter arilaitensis alone and cocultured with Penicillium sp. 12. RNA-seq of Glutamicibacter arilaitensis alone and cocultured with.
Label frequency and average enrichment of taxa.
Efficient CRISPR mutagenesis in C. glabrata.
Characterization of differentially expressed genes based on their COG classification. Characterization of differentially expressed genes based on their.
PKS distribution. PKS distribution. (A) Network map for known (purple) and unknown (yellow) PKS clusters, with the cluster number at each node and the.
GATC sites where methylation changes over time correspond to a change in gene expression in a dam mutant. GATC sites where methylation changes over time.
TF candidate selection pipeline.
Competition between cocultured TM1040 (HmuR+) and LH02 (HmuR−) for different iron sources. Competition between cocultured TM1040 (HmuR+) and LH02 (HmuR−)
Initial analysis of the transcriptional effects in eight carbon storage mutants (1 to 8; ΔphbA, phbB::ΩSpSm, ΔphbAB, ΔphbC, ΔphaZ, ΔbdhA, acsA2::Tn5, glgA1ΔPstI)
Superspacers shared between viral strains.
Miniaturized amplicon library preparation reaction reduces costs while maintaining microbiome readout integrity. Miniaturized amplicon library preparation.
Heatmap showing Spearman’s rho values for significant correlations between weed abundances and bacterial classes (i.e., OTU data pooled at the class level;
Expression of selected genes in the ΔSMcomS strain in response to increasing concentrations of XIP. RT-PCR analysis of gene expression was performed in.
SusG LES is required for efficient packing into OMVs
Expression of selected intergenic regions in response to increasing concentrations of XIP. qRT-PCR analysis of gene expression was performed with strain.
Fig. 3 Classification of gene essentiality by transposon mutagenesis.
Diversity of resistant and susceptible isolates.
Genome-wide mutant fitness data for three Bacteroidetes strains.
Mutant fitness data for two Proteobacteria.
Identification of a total of 126 VOCs (see Table S3 in the supplemental material) produced by 48 actinobacterial strains. Identification of a total of.
Examples of essential genes as determined by Tn-seq.
Relative abundance and expression of the 10 most abundant MAGs in the bioreactor at day 96. Relative abundance and expression of the 10 most abundant MAGs.
Presentation transcript:

Mutagenesis efficiency of different mariner kanamycin vectors in magic pool. Mutagenesis efficiency of different mariner kanamycin vectors in magic pool. On the basis of barcode frequency associated with each vector in the mariner-kan magic pool, we show the fraction of unique insertions that map to each of the 10 transposon vector designs in the preliminary mutant library generated with the mariner-Kan magic pool. For a description of all of the parts in each vector, see Table S1 in the supplemental material. Abbreviations: Brev2, Brevundimonas sp. strain GW460-12-10-4-LB2; Sphingo3, Sphingobium sp. strain GW456-12-10-14-TSB1; Sphingo4, Sphingopyxis sp. strain GW247-27LB. Hualan Liu et al. mSystems 2018; doi:10.1128/mSystems.00143-17