Landscape of Long Noncoding RNAs in Psoriatic and Healthy Skin

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Landscape of Long Noncoding RNAs in Psoriatic and Healthy Skin Rashmi Gupta, Richard Ahn, Kevin Lai, Elizabeth Mullins, Maya Debbaneh, Michelle Dimon, Sarah Arron, Wilson Liao  Journal of Investigative Dermatology  Volume 136, Issue 3, Pages 603-609 (March 2016) DOI: 10.1016/j.jid.2015.12.009 Copyright © 2015 The Authors Terms and Conditions

Figure 1 Heatmap of differentially expressed transcripts between PP and NN skin. Differentially regulated transcripts between PP and NN skin (n = 971) are shown in a heatmap image. The green color indicates high expression levels, and the red color indicates low expression levels. The black bar above the heatmap indicates NN skin, and the purple bar above the heatmap indicates PP skin. Note that the number of up-regulated transcripts is more than the number of down-regulated transcripts in PP. lncRNA, long noncoding RNA; NN, normal skin from healthy controls; PP, psoriatic plaque skin before treatment. Journal of Investigative Dermatology 2016 136, 603-609DOI: (10.1016/j.jid.2015.12.009) Copyright © 2015 The Authors Terms and Conditions

Figure 2 Unsupervised hierarchical clustering of transcripts expressed in PP and NN skin. Unsupervised hierarchical clustering was performed on all the lncRNAs expressed (n = 61991) in PP and NN. NN, normal skin from healthy controls; PP, psoriatic plaque skin before treatment. Journal of Investigative Dermatology 2016 136, 603-609DOI: (10.1016/j.jid.2015.12.009) Copyright © 2015 The Authors Terms and Conditions

Figure 3 Differential expression of lncRNAs in psoriatic skin before and after treatment. (a) Number of differentially expressed lncRNA transcripts in three comparisons: PP versus NN, PP versus PT, and PT versus NN. (b) lncRNA molecular distance to health analysis of PP and PT using NN as baseline. Molecular distance to health for PP and PT is shown. Expression levels of NN were used as baseline. Note that PP skin has higher molecular distance to health than PT. lncRNA, long noncoding RNA; NN, normal skin from healthy controls; PP, psoriatic plaque skin before treatment; PT, psoriatic plaque skin post-treatment. Journal of Investigative Dermatology 2016 136, 603-609DOI: (10.1016/j.jid.2015.12.009) Copyright © 2015 The Authors Terms and Conditions