Phylogenetic tree of genome-sequenced bacterial strains from the Populus microbiome. Phylogenetic tree of genome-sequenced bacterial strains from the Populus.

Slides:



Advertisements
Similar presentations
© red ©
Advertisements

LEVEL 1 Lesson 1 Topic: Christmas Tree and Presents Length:15 Minutes.
Monkey, Monkey In the Tree. Monkey, monkey in the tree Throw the yellow coconut down to me!
Safety Colors Quiz.
Bower building. Bower building. (A) Characteristic behavioral patterns associated with pit digging (Upper) and castle bower building (Lower). (B) Average.
مقالات إدارية حبيبات القهوة!!!! مبيعات قطاع الأعمال - الأحساء
Average Number of Photons
Comparisons of the circulating latent reservoir and rebound viruses.
J. -C. Lagier, F. Armougom, M. Million, P. Hugon, I. Pagnier, C
Experimental design for high‐throughput characterization of synthetic human gut microbiome consortia Experimental design for high‐throughput characterization.
The dicBF locus is conserved in E. coli species in different prophages
Safety Colors Quiz.
The Bright Light By Yan Shan and Andre.
Microbial flora of giant pandas.
Inferring chromatin organization.
Genomic rearrangements of E
Alignment of H-NS, H-NS2, and StpA amino acid sequences.
What Color is it?.
©
ADAGE model example. ADAGE model example. For one sample in the expression compendium (one column in the figure with red or green colors, representing.
Phylogenetic relationships within the family Astroviridae.
Connections identified on the basis of the genome sequence similarity of CPOs isolated from the environment and patients. Connections identified on the.
©
Hierarchical cluster analysis of reproducible parent masses (MS) representative of produced SMs from oral in vitro-grown biofilm representing >100 bacterial.
Genomic comparison of thermotolerance islands.
Distribution of TMEM173 in vertebrates.
Plots of the number of sequences [log (x + 1) scale] from bacterial OTUs in both PCR replicates (PCR1 and PCR2) of the 348 wild rodents analyzed in the.
Venn diagram of blaKPC-containing plasmids detected in the environment and patients. Venn diagram of blaKPC-containing plasmids detected in the environment.
Color Theory Study Guide
Taxonomic composition of the baboon and human gut microbiota.
Strain-level phylogenetic trees for microbes present in both the mother and infant. Strain-level phylogenetic trees for microbes present in both the mother.
The protein-protein interaction (PPI) network of four habitats, i. e
Maximum-likelihood phylogenetic tree of norovirus genomes belonging to genogroup GI, with the norovirus GII reference genome as an outlier. Maximum-likelihood.
Phylogenetic tree of perA A2-domain DNA sequence.
Distribution of the bacterial taxa that exhibit the greatest log fold changes in mean relative abundance. Distribution of the bacterial taxa that exhibit.
Phylogeny of Shiga toxin-encoding phage from SDi/SJo S. sonnei isolates. Phylogeny of Shiga toxin-encoding phage from SDi/SJo S. sonnei isolates. (A) progressiveMauve.
Isolation and phylogenetic characterization of ISS strains.
Statistical comparison of metabolites and analysis of differential metabolites and key metabolic pathways. Statistical comparison of metabolites and analysis.
Maximum-likelihood phylogeny of the household isolates from core SNPs
Maximum likelihood (ML) unrooted tree based on the full-length 16S rRNA genes (A) and 31 conserved single-copy genes (B) showing the phylogenetic position.
Phylogenetic tree of 170 Lactobacillus species.
(A, left) Radial cladogram based on RAxML-based maximum-likelihood phylogeny (500 bootstraps, gamma distribution model, and LG+F substitution model) constructed.
Phylogenetic tree of 38 Pseudomonas type strains, based on the V3-V5 region sequence of the 16S rRNA gene (V3 primer, positions 442 to 492; and V5 primer,
Phylogenetic diversity of archaeal lineages in the great ape gut microbiome. Phylogenetic diversity of archaeal lineages in the great ape gut microbiome.
Volume 22, Issue 10, Pages (October 2014)
Successful spread and transmission of rifampin-resistant clones.
Phylogenetic tree of K. variicola and K
Maximum likelihood phylogeny of USA500 and other CC8 strains.
Visualization of lineage radius increase.
NP sequence alignment of human H1N1 strains and phylogenetic analysis of representative NP from pandemic and seasonal H1N1 strains. NP sequence alignment.
Belowground microbiome community responses.
Phylogenetic and convergence analyses of rpoB mutations.
Color Box Button - Gray Type : object Type : object Type : object
Core genome phylogeny of V. anguillarum strains.
Relative abundance (RA) of individual phyla that are strongly correlated (|rs| = >0.6; q =
Genomic phylogeny reveals the long-term coexistence of diverse clades.
Phylogenetic tree of 38 Pseudomonas type strains, based on a concatenated nine-gene MLST analysis. Phylogenetic tree of 38 Pseudomonas type strains, based.
Box plots displaying the median, minimum, maximum, and first and third quartiles of the percentage of the 25 members of the core microbiome detected in.
Distribution of ARGs in RefSoil genomes and plasmids.
Phylogenetic tree of K. variicola from humans and animals.
Phylogenetic diversity (PD) by significant market integration factors, house modernity (A), power usage (B), and house modernity and power usage (C). Phylogenetic.
Phylogenetic analysis of AquK2P.
Volume 12, Issue 3, Pages (March 2019)
P-network of 2,616 prokaryote genomes based on chromosomal sequences with rRNA genes removed. P-network of 2,616 prokaryote genomes based on chromosomal.
Interkingdom interactions between fungi and bacteria.
Genomic characterization of Bacillus cereus sensu lato group.
Phylogenetic tree of the complete genomes of 27 representative human (black) and camel (red) MERS-CoV strains rooted by NeoCoV (KC ). Phylogenetic.
Phylogenetic analysis of complete Fusobacterium genomes.
Tree depicting the phylogenetic relationships of all strains included in this study. Tree depicting the phylogenetic relationships of all strains included.
ADAGE extracted features that represented sequence differences between strains. ADAGE extracted features that represented sequence differences between.
Presentation transcript:

Phylogenetic tree of genome-sequenced bacterial strains from the Populus microbiome. Phylogenetic tree of genome-sequenced bacterial strains from the Populus microbiome. The tree was inferred from approximately maximum likelihood approach with FastTree v2.1.9. Branch support values are noted on each branch, and branches are colored by phylum or class as follows: yellow, Actinobacteria; red, Bacteroidetes; green, Firmicutes; dark blue, Alphaproteobacteria; blue, Betaproteobacteria; light blue, Gammaproteobacteria. The isolation compartment is noted with color strip as indicated: black, rhizosphere isolate; gray, endosphere isolate. Patricia M. Blair et al. mSystems 2018; doi:10.1128/mSystems.00045-18