INFONET Seminar Application Group

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Presentation transcript:

INFONET Seminar Application Group Frequency Domain Compressive Sensing for Ultrasound Imaging Celine Quinsac, Adrian Basarab Advances in Acoustic and Vibration April 2012 Presenter Pavel Ni Good afternoon everyone~ First of all, thank you for attending my MS defense presentation. My name is Younghak Shin Im a member of INFONET lab. at GIST The title of my thesis is this

Introduction Conventional Ultrasound imaging systems rely on Shannon-Nyquist theorem. Often US devices use a sampling rate that is at least four times the central frequency. Consequently large amount of data imply problems in: Real-time imaging (especially 3D) Data-transfer Grows of machinery size Compressive sensing allows reduce volume of data directly acquiring compressed signal. Recently CS framework was adopted to ultrasound imaging [10-15] (all paper except one are conference papers), Ultrasound Doppler [16-17] or Photoacoustic [18]

Sampling a signal Sampling can be summarized by measuring linear combination of an analog signal Where are the measurements, are sampling vectors, and is the number of measurements. The most common sampling protocol consist of vectors of Dirac's at equal time. The measurements then simple discretization of . In CS, the number of measurements is m << n. However, when the number of measurements is smaller then the signal size, then it is ill-posed inverse problem. If is a matrix of size , concatenating the sampling vectors , then . The signal corresponding to the measurements has infinity many solutions. CS shows that can be reconstructed if it has sparse representation in a given basis and that the measurements are incoherent with that basis.

Concept of Sparsity Sparsity is the idea that signal may have a concise representation in a given basis. Hence a dense signal in the time domain can be coded with only a few samples. Mathematically it translates as follows: Where is the original signal, are the coefficients of the signal in sparse basis, and is an orthonormal basis. The largest coefficients are noted , and the corresponding signal . If is sparse in the basis composed of the vectors , then and the error is small.

Concept of Sparsity Sparsity therefore leads to compressive nature of signal: if signal has sparse representation, then the information coding that signal can be compressed on a few coefficients. However directly acquire only significant coefficients without knowing their positions is impossible. CS overcomes this issue via an incoherent sampling.

Incoherent Sampling The term Incoherent sampling conveys the idea that the sampling protocol in (1) has to be as little correlated as possible with sparse representation in (2). The mathematical definition of incoherence is: Where is the sampling basis and is the sparsifying basis. If the two bases are strongly correlated, then will be close to , and if the are not correlated, then it will be close 1. CS requires incoherence . If the sampling basis completely random , then it will be maximally incoherent with sparsifying fixed basis.

Incoherent Sampling (a) A full US RF signal (b) its sparse representation FT When sampling is incoherent with the sparsifying basis then the measurements in that basis are dense (c,d) When the sampling basis and the sparsifying basis are coherent (e,f), the measurements in the sparsifying basis are themselves sparse. There is significant information missing Knowing sparsifying basis and incoherent measurements in cs make it possible to reconstruct original signal using optimization.

Signal Reconstruction through Optimization Reconstruction performed via convex optimization: is the reconstructed sparse signal. The optimization searches amongst all the signals that verify the measurements y, the one with the smallest l1 norm, that is the sparsest. Optimization removes the interferences caused incoherent under sampling from the sparse representation of the measurements.

Sampling Protocols in Ultrasound The data acquisition in US is performed in spatial domain. The sampling basis has to be incoherent with sparsifying basis. There are several sampling protocols adapted and incoherent with sparsifying basis. Basically they all consist in taking samples at random locations (taking samples at specific times on RF signal or taking some RF lines at specific locations). - Eight different protocols are proposed: CS uniformly random mask, denoted Φ1 and shown in figure6(a) this sampling is maximally incoherent with the Fourier transform. However switching rapidly from one position to the next in this kind of sampling pattern might be difficult from instrumentation point of view

Reconstruction of Ultrasound Images The acquisition consist in taking samples of the RF signals. This sampling protocol is similar to a basis of Diracs. Basis incoherent with Diracs and where US images are sparse is needed. Fourier basis is maximally incoherent with Diracs and because the US image k-space is sufficiently sparce. The function to minimize is where M is the k-space of the US RF image m (M= m), and A is the sampling scheme (A = ), y are the RF US image measurements and is a coefficient weighting for sparsity.

Results on a 2D Simulation Image The proposed CS method was used to reconstruct the k-space of an RF image simulated using the Field ii simulation program. Map of kidney used with linear transducer. Sampling frequency 20 MHz. The sampling were studied to compare CS reconstruction using a fixed optimal set to 0.005 and the reweighted minimization

Results on a 2D Simulation Image

Results on a 2D Simulation Image

Discussion and Conclusion Sampling using high sampling rate is neither easy nor cost-effective in high frequency applications. It was showed potential of CS to reduce data volume and wrap acquisition at the price of a reconstruction using the norm. Future work Better sparsity basis Investigation of several optimization routines The aim is to reach fastest and most reliable reconstruction from as little amount of data as possible.

Thank you