Family level bar plots generated in QIIME 1. 9

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Family level bar plots generated in QIIME 1. 9 Family level bar plots generated in QIIME 1.9.0 display differences in CSS-normalized relative abundances of commensal butyrogenic bacteria in each respective treatment cohort (CDI versus non-CDI). Family level bar plots generated in QIIME 1.9.0 display differences in CSS-normalized relative abundances of commensal butyrogenic bacteria in each respective treatment cohort (CDI versus non-CDI). Greater abundances of both Ruminococcaceae and Lachnospiraceae in the untreated non-CDI cohort than in the untreated CDI samples. An increase in Lachnospiraceae and Ruminococcaceae abundance can be observed in the CDI cohort when considering the fidaxomicin and metronidazole treatment cohorts. In the vancomycin treatment cohort, a 1.9% decrease in Ruminococcaceae can be observed in the CDI cohort, whereas Lachnospiraceae did not differ substantially (±0.001%) between disease statuses. Regina Lamendella et al. mSphere 2018; doi:10.1128/mSphere.00572-17