Molecular Analysis of Plasma From Patients With ROS1-Positive NSCLC

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Molecular Analysis of Plasma From Patients With ROS1-Positive NSCLC Ibiayi Dagogo-Jack, MD, Marguerite Rooney, BS, Rebecca J. Nagy, MS, Jessica J. Lin, MD, Emily Chin, BS, Lorin A. Ferris, MS, Jennifer Ackil, NP, Jochen K. Lennerz, MD, Richard B. Lanman, MD, Justin F. Gainor, MD, Alice T. Shaw, MD, PhD  Journal of Thoracic Oncology  DOI: 10.1016/j.jtho.2019.01.009 Copyright © 2019 International Association for the Study of Lung Cancer Terms and Conditions

Figure 1 Study population. The schematic represents the population of patients studied in this analysis. Plasma specimens are indicated in blue. Tissue specimens are identified by green rectangles. Yellow boxes refer to overlap between two methods. NGS, next-generation sequencing; FISH, fluorescence in-situ hybridization; TKI, tyrosine kinase inhibitor; MGH, Massachusetts General Hospital; ctDNA, circulating tumor DNA Journal of Thoracic Oncology DOI: (10.1016/j.jtho.2019.01.009) Copyright © 2019 International Association for the Study of Lung Cancer Terms and Conditions

Figure 2 Spectrum of ROS1 fusion partners. The pie charts represent the relative prevalence of distinct fusion partners in plasma (A) and tissue (B). Journal of Thoracic Oncology DOI: (10.1016/j.jtho.2019.01.009) Copyright © 2019 International Association for the Study of Lung Cancer Terms and Conditions

Figure 3 Landscape of genetic alterations in crizotinib-resistant plasma specimens. The grid depicts genetic alterations detected in plasma collected from patients with ROS1-positive lung cancer at relapse on crizotinib. In some cases, multiple genetic alterations involving a single gene were identified but this is not captured in the heatmap. Apart from CDKN2A which includes copy number changes, all other genetic alterations were single nucleotide variants. Journal of Thoracic Oncology DOI: (10.1016/j.jtho.2019.01.009) Copyright © 2019 International Association for the Study of Lung Cancer Terms and Conditions

Figure 4 Spatial heterogeneity captured through plasma genotyping. The figures illustrate the disease course of a patient with ROS1-positive NSCLC sequentially treated with crizotinib followed by crizotinib combined with chemotherapy. The patient did not have liver metastases at diagnosis (A) but developed new liver lesions (B) after 3 months on crizotinib at which time only plasma detected ROS1 G2032R. At subsequent progression on combination therapy, G2032R was detected in pleural fluid (pleural fluid is absent pre-treatment in C and present at relapse in D) and plasma. Journal of Thoracic Oncology DOI: (10.1016/j.jtho.2019.01.009) Copyright © 2019 International Association for the Study of Lung Cancer Terms and Conditions