Locations of genes that exhibited decreased levels of distribution of the RpoZ-defective RNAP. The genes that showed decreased-level distribution of RpoZ-defective.

Slides:

Advertisements

Similar presentations

Fig. 4-1, p Fig. 4-2, p. 109 Fig. 4-3, p. 110.

Advertisements

Slide 1Fig. 22.1, p.669. Slide 2Fig. 22.3, p.670.

Slide 1Fig. 17.1, p.513. Slide 2Table 17.1, p.514.

P.464. Table 13-1, p.465 Fig. 13-1, p.466 Fig. 13-2, p.467.

Fig. 11-1, p p. 360 Fig. 11-2, p. 361 Fig. 11-3, p. 361.

Table 6-1, p Fig. 6-1, p. 162 p. 163 Fig. 6-2, p. 164.

Figure 1.1 The observer in the truck sees the ball move in a vertical path when thrown upward. (b) The Earth observer views the path of the ball as a parabola.

Fig. 6-CO, p p. 185a p. 185b p. 185c p. 185d.

Summary of genetic alterations in resistant biopsies among patients progressing on ceritinib or alectinib. Summary of genetic alterations in resistant.

Comparison (θ) of the mean dinucleotide variability distribution for (A) genes with MAE vs. Comparison (θ) of the mean dinucleotide variability distribution.

Comparison (R) of the mean observed to expected dinucleotide distribution for (A) genes with MAE vs. Comparison (R) of the mean observed to expected dinucleotide.

Dynamic modeling of the intracellular availability of phosphoenolpyruvate with respect to the specific rate of fructose uptake. Dynamic modeling of the.

Similarity of gene expression level (A) and nucleosome occupancy profile (B) between paralog pairs. Similarity of gene expression level (A) and nucleosome.

Correlation between the ability of Novosphingobium strains from four different habitats to degrade aromatic and xenobiotic compounds. Correlation between.

Locations of constitutive promoters of RNAP RpoD holoenzyme within prophages. Locations of constitutive promoters of RNAP RpoD holoenzyme within prophages.

Relative abundances of the top 10 most abundant OTUs across all fish samples are shown along with the data from the probiotic B. pumilus RI06-95 (OTU 3673)

Coupling immunophenotypes to Drop‐seq data

The dicBF locus is conserved in E. coli species in different prophages

Condensed metabolic map of M

Genomic rearrangements of E

H-NS2 is upregulated in an hns mutant derivative of the strain E

Chromatin binding sites shared by pCREB1 and ERα are predominantly cAMP induced. Chromatin binding sites shared by pCREB1 and ERα are predominantly cAMP.

Enriched gene functions responding to irradiance and pO2.

Characterized LuxR-associated and QS-regulated BGCs were identified in our screen. Characterized LuxR-associated and QS-regulated BGCs were identified.

PM analysis of wild-type E. coli K-12 and its rpoZ-defective mutant.

Gene content and order of the clade B-specific GT-rich gene cluster.

Systematic analysis of host-pathogen interactions.

Distribution of the bacterial taxa that exhibit the greatest log fold changes in mean relative abundance. Distribution of the bacterial taxa that exhibit.

Fig. 6-CO, p. 211.

H-NS2-FLAG expression is upregulated in DMEM and M9 minimal medium and when cells enter the stationary growth phase. H-NS2-FLAG expression is upregulated.

Box plots of quality scores over positions in sequenced reads.

Functional enrichment of differentially expressed genes.

The BRD4 bromodomain is critical for expression of SASP genes.

Comparison of gene expression maps from available S

PICRUSt analysis results of predicted functional pathways in the gut microbiota. PICRUSt analysis results of predicted functional pathways in the gut microbiota.

The mass spectrum of heterocyst glycolipid and the corresponding structures are shown on the right. The mass spectrum of heterocyst glycolipid and the.

A multitiered approach to characterize transcriptome structure.

Transcription of cellulolytic genes disaggregated by genome.

RNA-seq of Glutamicibacter arilaitensis alone and cocultured with Penicillium sp. 12. RNA-seq of Glutamicibacter arilaitensis alone and cocultured with.

T7 transcripts increase relative to E. coli transcripts over time.

Peptide abundances are uniformly distributed across the capsid protein in the recoded T7 strain. Peptide abundances are uniformly distributed across the.

Label frequency and average enrichment of taxa.

RNA abundance correlates with fitness.

Sampling locations and IDs for accessions sequenced in this study.

Distribution of deletions and insertions in the ade6-(GACC)7ΔT repeat.

Distribution and extent of expression.

Distribution of ARGs in RefSoil genomes and plasmids.

Fig. 4 Gene disruption via chip.

Functional distribution of genes activated upon exposure to C

Fig. 2 Genome-wide association of 6669 SNPs with migration phenotype, across all sampling locations, and selective sweeps within LG1. Genome-wide association.

Initial analysis of the transcriptional effects in eight carbon storage mutants (1 to 8; ΔphbA, phbB::ΩSpSm, ΔphbAB, ΔphbC, ΔphaZ, ΔbdhA, acsA2::Tn5, glgA1ΔPstI)

QTL detected in SIM analysis across test environments.

The MS/MS spectra and MALDI IMS distributions of mannitol and the corresponding polysaccharide containing mannitol are shown. The MS/MS spectra and MALDI.

Multiplexed Mutagenesis Using the Csy4 System in Tomato Protoplasts.

Schematic representation of accessory elements carrying virulence or fitness factors in the V. anguillarum strains. Schematic representation of accessory.

Increased proIGF-II and decreased IGF-IIR in BTBR compared with B6 mice. Increased proIGF-II and decreased IGF-IIR in BTBR compared with B6 mice. Western.

Expression of selected genes in the ΔSMcomS strain in response to increasing concentrations of XIP. RT-PCR analysis of gene expression was performed in.

Enrichment of KEGG pathways in microbial genes in different samples.

KEGG categories of host DEGs (up- and downregulated genes) enriched at selected points after φAbp1 infection. KEGG categories of host DEGs (up- and downregulated.

Information on sequenced Q. lobata adult #786.

HPV–human protein network map.

Mutant fitness data for two Proteobacteria.

The long tail of mutational hotspots in cancer.

Fig. 1 Fractional coverage of the mapping method used in this study.

Host gene expression changes following exposure to the microbiota.

Distinct subtypes of CAFs are detected in human PDAC

Fig. 4 The three DBT cycles involved in building syn3.0.

Impact of the SOS activities on E. coli mutation rates.

ChIP-chip analysis of wild-type (WT) and RpoZ-defective mutant RNAP

Presentation transcript:

Locations of genes that exhibited decreased levels of distribution of the RpoZ-defective RNAP. The genes that showed decreased-level distribution of RpoZ-defective RNAP were identified by ChIP-chip analysis within six cryptic prophages of E. coli K-12 (Fig. 1; top 31 genes are in Table 3). Locations of genes that exhibited decreased levels of distribution of the RpoZ-defective RNAP. The genes that showed decreased-level distribution of RpoZ-defective RNAP were identified by ChIP-chip analysis within six cryptic prophages of E. coli K-12 (Fig. 1; top 31 genes are in Table 3). Locations of these genes within each prophage are shown by blue arrows along the genetic map of the respective prophage. Decreased-level occupancy was detected in particular within CP4-6 prophage. Kaneyoshi Yamamoto et al. mSystems 2018; doi:10.1128/mSystems.00172-17