Molecular characterization of dengue virus 1 from autochthonous dengue fever cases in Croatia I.C. Kurolt, L. Betica-Radić, O. Daković-Rode, L. Franco,

Slides:

Advertisements

Similar presentations

Molecular characterization of dengue virus 1 from autochthonous dengue fever cases in Croatia I.C. Kurolt, L. Betica-Radić, O. Daković-Rode, L. Franco,

Advertisements

Molecular surveillance of measles and rubella in the WHO European Region: new challenges in the elimination phase S. Santibanez, J.M. Hübschen, M.C.

Small Indian mongooses and masked palm civets serve as new reservoirs of Bartonella henselae and potential sources of infection for humans S. Sato, H.

Tick-borne encephalitis (TBE) virus prevalence and virus genome characterization in field-collected ticks (Ixodes ricinus) from risk, non-risk and former.

Molecular epidemiology suggests Venezuela as the origin of the dengue outbreak in Madeira, Portugal in 2012–2013 L. Franco, I. Pagan, N. Serre Del Cor,

C. Rodó, A. Suy, E. Sulleiro, A. Soriano-Arandes, A. Antón, I

A.K. Reddy, P. Garg, I. Kaur Clinical Microbiology and Infection

Genetic detection of Dobrava/Belgrade virus in a Czech patient with Haemorrhagic fever with renal syndrome A. Papa, H. Zelená, D. Barnetová, L. Petroušová

E. Descloux, C. La Fuentez, Y. Roca, X. De Lamballerie

J. Hofmann, M. Meier, M. Enders, A. Führer, J. Ettinger, B. Klempa, S

Variability of human immunodeficiency virus-1 in the female genital reservoir during genital reactivation of herpes simplex virus type 2 J. LeGoff, P.

M.V. Assous, A. Wilamowski Clinical Microbiology and Infection

W. Li, L. Liu, X. Jiang, X. Guo, M. Garnier, D. Raoult, P. Parola

Development of 16S rRNA-based probes for the identification of Gram-positive anaerobic cocci isolated from human clinical specimens A.C.M. Wildeboer-Veloo,

Investigation of human parvovirus B19 occurrence and genetic variability in different leukaemia entities A.C. da Costa, I. Bendit, A.C.S. de Oliveira,

C. Rodó, A. Suy, E. Sulleiro, A. Soriano-Arandes, A. Antón, I

Evidence of genotypic diversity among Candida auris isolates by multilocus sequence typing, matrix-assisted laser desorption ionization time-of-flight.

West Nile virus outbreak in Israel in 2015: phylogenetic and geographic characterization in humans and mosquitoes Y. Lustig, Z. Kaufman, B. Mannasse,

E. Tortoli, P. G. Rogasi, E. Fantoni, C. Beltrami, A. De Francisci, A

L. Dubourg Clinical Microbiology and Infection

A. Papa, K. Dumaidi, F. Franzidou, A. Antoniadis

F. Aujoulat, H. Marchandin, I. Zorgniotti, A. Masnou, E. Jumas-Bilak

Elimination of symbiotic Aeromonas spp

Tracking the naturally occurring mutations across the full-length genome of hepatitis B virus of genotype D in different phases of chronic e-antigen-negative.

Detection of causative agents of tick-borne rickettsioses in Western Siberia, Russia: identification of Rickettsia raoultii and Rickettsia sibirica DNA.

Male patient with acute hepatitis E in Genoa, Italy: figatelli (pork liver sausage) as probable source of the infection A.R. Garbuglia, A.I. Alessandrini,

Next-generation sequencing technology in clinical virology

Characterisation of the Omsk collection of rickettsial strains

Hepatitis E virus as a newly identified cause of acute viral hepatitis during human immunodeficiency virus infection P. Colson, C. Dhiver, R. Gérolami

F. Magurano Clinical Microbiology and Infection

Human infection with H9N2 avian influenza in northern China

Enterovirus D68 nosocomial outbreak in elderly people, France, 2014

Multiple genotypes and subtypes of hepatitis B and C viruses in Belarus: similarities with Russia and western European influences C.M. Olinger, N.V.

A novel phlebovirus in Albanian sandflies

Evidence of horizontal gene transfer between amoeba and bacteria

Ehrlichia canis phylogenetic analysis of the Borgo (Corsica) strain

A. Papa, K. Xanthopoulou, S. Gewehr, S. Mourelatos

Identification and pathogenicity analysis of a novel non-tuberculous mycobacterium clinical isolate with nine-antibiotic resistance Z.-Y. Zhang, Z.-Q.

The oral cavity as a natural reservoir for Streptococcus sinensis

Identification of a novel cosavirus species in faeces of children and its relationship with acute gastroenteritis in China J.-M. Yu, Y.-Y. Ao, L.-L.

Rapid identification of clinical Trichoderma longibrachiatum isolates by cellulose-acetate electrophoresis-mediated isoenzyme analysis A. Szekeres, M.

Detection of Wolbachia genes in a patient with non-Hodgkin's lymphoma

Whole genome-based phylogenetic analysis of Rickettsiae

Hepatitis B virus in Buenos Aires, Argentina: genotypes, virological characteristics and clinical outcomes S.C. Pezzano, C. Torres, H.A. Fainboim, M.B.

Development of a real-time PCR assay for the specific detection and identification of Streptococcus pseudopneumoniae using the recA gene V. Sistek, M.

Outbreak of hand, foot and mouth disease/herpangina associated with coxsackievirus A6 and A10 infections in 2010, France: a large citywide, prospective.

MW polyomavirus and STL polyomavirus present in tonsillar tissues from children with chronic tonsillar disease J. Peng, K. Li, C. Zhang, Q. Jin Clinical.

Detection of human coronavirus NL63, human metapneumovirus and respiratory syncytial virus in children with respiratory tract infections in south-west.

Bufavirus genotype 3 in Turkish children with severe diarrhoea

Sequence Type ST131 and ST10 Complex (ST617) predominant among CTX-M-15- producing Escherichia coli isolates from Nigeria* I. Aibinu, T. Odugbemi, W.

HBV subgenotype misclassification expands quasi-subgenotype A3

Characterization of clinical strains of Aspergillus terreus complex: molecular identification and antifungal susceptibility to azoles and amphotericin.

Emergence of Crimean–Congo haemorrhagic fever in Greece

S. De Grazia, G.M. Giammanco, C. Colomba, A. Cascio, S. Arista

Human isolates of Aeromonas possess Shiga toxin genes (stx1 and stx2) highly similar to the most virulent gene variants of Escherichia coli A. Alperi,

Genetic diversity of Legionella pneumophila inferred from rpoB and dotA sequences K.S. Ko, H. Miyamoto, H.K. Lee, M.-Y. Park, K. Fukuda, B.J. Park, Y.-H.

Amplification and pyrosequencing of near-full-length hepatitis C virus for typing and monitoring antiviral resistant strains P. Trémeaux, A. Caporossi,

N. Santos, G. S. Mendes, R. C. Silva, G. A. Pena, M. Rojas, A. R

Molecular epidemiology and genetic diversity of human astrovirus in South Korea from 2002 to 2007 A.Y. Jeong, H.S. Jeong, M.Y. Jo, S.Y. Jung, M.S. Lee,

Prevalence of CXCR4-tropic viruses in clustered transmission chains at the time of primary HIV-1 infection P. Frange, L. Meyer, J. Ghosn, C. Deveau,

Detection of a new subgenotype of hepatitis B virus genotype A in Cameroon but not in neighbouring Nigeria J.M. Hübschen, P.O. Mbah, J.C. Forbi, J.A.

K. S. Ko, T. Kuwahara, L. Haehwa, Y. -J. Yoon, B. -J. Kim, K. -H

M. Biçmen, Z. Gülay, S.V. Ramaswamy, D.M. Musher, D. Gür

L. Zhang, D. Raoult, P.-E. Fournier

T. A. Nguyen, L. P. Hoang, L. D. Pham, K. T. Hoang, S. Okitsu, M

Sandfly fever virus outbreak in Cyprus

J. -H. Lin, S. -C. Chiu, J. -C. Cheng, H. -W. Chang, K. -L. Hsiao, Y

Molecular epidemiology of hepatitis B virus in Iran

Actinotignum schaalii (formerly Actinobaculum schaalii): a newly recognized pathogen— review of the literature R. Lotte, L. Lotte, R. Ruimy Clinical.

Novel West Nile virus lineage 1a full genome sequences from human cases of infection in north-eastern Italy, 2011 L. Barzon Clinical Microbiology and.

Presentation transcript:

Molecular characterization of dengue virus 1 from autochthonous dengue fever cases in Croatia I.C. Kurolt, L. Betica-Radić, O. Daković-Rode, L. Franco, H. Zelená, A. Tenorio, A. Markotić Clinical Microbiology and Infection Volume 19, Issue 3, Pages E163-E165 (March 2013) DOI: 10.1111/1469-0691.12104 Copyright © 2013 European Society of Clinical Infectious Diseases Terms and Conditions

FIG. 1 Phylogenetic tree from DENV serotype 1 strains and isolates based on a 222 bp fragment from the E-NS1 junction, corresponding to the nucleotides 2198–2419 of the DENV1 reference strain. This tree was inferred using the Neighbour-Joining method, employing the p-distance Substitution model including Transitions and Transversions, was constructed by bootstrap analysis of 1000 replicates using MEGA5 software and rooted by the DENV serotype 2 strain 16681 (Accession No U87411). The numbers at the nodes indicate percentage bootstrap replicates (of 100); values below 65% are not shown. Scale bar indicates nucleotide substitutions per site. The sequence obtained from the two autochthonous cases is marked with a rhombus. Clinical Microbiology and Infection 2013 19, E163-E165DOI: (10.1111/1469-0691.12104) Copyright © 2013 European Society of Clinical Infectious Diseases Terms and Conditions