K-Means clustering of protein and mRNA expression patterns after PPAR agonists treatments. k-Means clustering of protein and mRNA expression patterns after.

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binding sites 58 of the 473 unambiguously assigned phosphorylation sites are predicted by Scansite to be sites for binding. 50 of these correspond.

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k-Means clustering of protein and mRNA expression patterns after PPAR agonists treatments. k-Means clustering of protein and mRNA expression patterns after PPAR agonists treatments. One-dimensional k-means gene clustering was performed using k = 2. The up (purple)- or down (blue)-regulated mRNAs/proteins are represented in cluster 1 and 2, respectively. The three different PPAR agonists and the days of each treatment are shown on the right. The MS-identified proteins and their corresponding mRNAs are labeled on top of each panel. Two genes (Es1 and Hspa9a) coding reciprocal regulation of mRNA and protein are indicated in red. Qiang Tian et al. Mol Cell Proteomics 2004;3:960-969 © 2004 The American Society for Biochemistry and Molecular Biology