Cell Factory Engineering

Slides:



Advertisements
Similar presentations
Structure of a Ubiquitin E1-E2 Complex: Insights to E1-E2 Thioester Transfer Shaun K. Olsen, Christopher D. Lima Molecular Cell Volume 49, Issue 5, Pages.
Advertisements

Individualized Medicine from Prewomb to Tomb Eric J. Topol Cell Volume 157, Issue 1, Pages (March 2014) DOI: /j.cell Copyright.
The RAG Recombinase Dictates Functional Heterogeneity and Cellular Fitness in Natural Killer Cells Jenny M. Karo, David G. Schatz, Joseph C. Sun Cell Volume.
What We Talk About When We Talk About Fat Evan D. Rosen, Bruce M. Spiegelman Cell Volume 156, Issue 1, Pages (January 2014) DOI: /j.cell
Maintaining Cell Identity through Global Control of Genomic Organization Gioacchino Natoli Immunity Volume 33, Issue 1, Pages (July 2010) DOI: /j.immuni
Making Proteins in the Powerhouse B. Martin Hällberg, Nils-Göran Larsson Cell Metabolism Volume 20, Issue 2, Pages (August 2014) DOI: /j.cmet
Transcription Factor Activity Mapping of a Tissue-Specific In Vivo Gene Regulatory Network Lesley T. MacNeil, Carles Pons, H. Efsun Arda, Gabrielle E.
Eph-Ephrin Bidirectional Signaling in Physiology and Disease Elena B. Pasquale Cell Volume 133, Issue 1, Pages (April 2008) DOI: /j.cell
Xenobiotics Shape the Physiology and Gene Expression of the Active Human Gut Microbiome Corinne Ferrier Maurice, Henry Joseph Haiser, Peter James Turnbaugh.
Dynein Anchors Its mRNA Cargo after Apical Transport in the Drosophila Blastoderm Embryo Renald Delanoue, Ilan Davis Cell Volume 122, Issue 1, Pages
Evolution of the Cancer Stem Cell Model Antonija Kreso, John E. Dick Cell Stem Cell Volume 14, Issue 3, Pages (March 2014) DOI: /j.stem
Nuclear Receptors, RXR, and the Big Bang Ronald M. Evans, David J. Mangelsdorf Cell Volume 157, Issue 1, Pages (March 2014) DOI: /j.cell
Human Brown Adipose Tissue Sven Enerbäck Cell Metabolism Volume 11, Issue 4, Pages (April 2010) DOI: /j.cmet Copyright © 2010.
A View to a Kill: The Bacterial Type VI Secretion System Brian T. Ho, Tao G. Dong, John J. Mekalanos Cell Host & Microbe Volume 15, Issue 1, Pages 9-21.
The Mitochondrial Basis of Aging Nuo Sun, Richard J. Youle, Toren Finkel Molecular Cell Volume 61, Issue 5, Pages (March 2016) DOI: /j.molcel
Cell-to-Cell Transfer of M. tuberculosis Antigens Optimizes CD4 T Cell Priming Smita Srivastava, Joel D. Ernst Cell Host & Microbe Volume 15, Issue 6,
Gastrulation Movements: the Logic and the Nuts and Bolts Maria Leptin Developmental Cell Volume 8, Issue 3, Pages (March 2005) DOI: /j.devcel
Chapter 08 The T Cell Receptor: Proteins and Genes
Untangling P-Bodies: Dissecting the Complex Web of Interactions that Enable Tiered Control of Gene Expression  Christopher J. Kershaw, Mark P. Ashe  Molecular.
Protein Accounting in the Cellular Economy
Synthetic Gene Circuits Learn to Classify
Enzyme Annotation with Chemical Tools
Regulatory Subunits of Energy-Dependent Proteases
A Pro-metastatic tRNA Pathway
P Bodies, Stress Granules, and Viral Life Cycles
Jan Gruber, Brian K. Kennedy  Cell 
The Evolution of the Algorithms for Collective Behavior
P Bodies, Stress Granules, and Viral Life Cycles
Quit Stalling or You’ll Be Silenced
Cellular Fatty Acid Metabolism and Cancer
Mutant p53 in Cancer: New Functions and Therapeutic Opportunities
Regulatory Subunits of Energy-Dependent Proteases
B. Brett Finlay, Grant McFadden  Cell 
Volume 18, Issue 8, Pages (August 2010)
Protein Accounting in the Cellular Economy
PU.1 Takes Control of the Dendritic Cell Lineage
Codon Clarity or Conundrum?
P Bodies and the Control of mRNA Translation and Degradation
Proteomics Moves into the Fast Lane
The p27Kip1 tumor suppressor gene: Still a suspect or proven guilty?
Sensing the Right Time to Be Productive
A Dead End for MicroRNAs
Eukaryotic Transcription Activation: Right on Target
Global Edgetic Rewiring in Cancer Networks
Copyright © 2012, Elsevier Inc. All rights Reserved.
Untangling P-Bodies: Dissecting the Complex Web of Interactions that Enable Tiered Control of Gene Expression  Christopher J. Kershaw, Mark P. Ashe  Molecular.
Translational Control by the Eukaryotic Ribosome
Tunable NF-κB Oscillations in Yeast
Mitochondria and Cancer
Rewiring Bacteria, Two Components at a Time
Connecting Threads: Epigenetics and Metabolism
NO Signals from the Cancer Stem Cell Niche
A Toolbox for Microbiome Engineering
Microbial Molecules from the Multitudes within Us
The Cell Biology of Genomes: Bringing the Double Helix to Life
Polycomb Repression under the Skin
Ubiquitin Makes Its Mark on Immune Regulation
The Yeast Saccharomyces cerevisiae: A Versatile Model System for the Identification and Characterization of Bacterial Virulence Proteins  Keri A. Siggers,
Modeling Text-Based Requirements and their Relationship to Design
A FIRE-y PAGE in the Computational Analysis of Cancer Profiles
The Plasticity of Aging: Insights from Long-Lived Mutants
Augmenting the SMN Protein to Treat Infantile Spinal Muscular Atrophy
The Hidden Memory of Differentiating Cells
Waddington’s Valleys and Captain Cook’s Islands
Immune Cells Exploit a Neural Circuit to Enter the CNS
Chapter 29 - Stem Cells and Generation of New Cells in the
CHO Cells Can Make More Protein
Volume 12, Issue 6, Pages (December 2007)
Cellular Alchemy and the Golden Age of Reprogramming
Mutant p53 in Cancer: New Functions and Therapeutic Opportunities
Presentation transcript:

Cell Factory Engineering Anne Mathilde Davy, Helene Faustrup Kildegaard, Mikael Rørdam Andersen  Cell Systems  Volume 4, Issue 3, Pages 262-275 (March 2017) DOI: 10.1016/j.cels.2017.02.010 Copyright © 2017 Elsevier Inc. Terms and Conditions

Cell Systems 2017 4, 262-275DOI: (10.1016/j.cels.2017.02.010) Copyright © 2017 Elsevier Inc. Terms and Conditions

Figure 1 Ontology of Different Types of Cellular Engineering Covered in This Review Cell Systems 2017 4, 262-275DOI: (10.1016/j.cels.2017.02.010) Copyright © 2017 Elsevier Inc. Terms and Conditions

Figure 2 Engineering Strategies for Optimizing the Production of Native Metabolites Metabolites are denoted: S, substrate; S2, alternative substrate; X1-9, pathway intermediates; P, product of interest; BP, by-product. Generic engineering strategies are marked in blue and annotated as 1A–1I (described in the main text). Cell Systems 2017 4, 262-275DOI: (10.1016/j.cels.2017.02.010) Copyright © 2017 Elsevier Inc. Terms and Conditions

Figure 3 Engineering Strategies for Heterologous Expression of Biosynthetic Pathways in a Eukaryotic Host Cell Metabolites are denoted: S, Substrate; X1-6, pathway intermediates; P, product of interest; CS, co-substrate; E1-10, enzymes; FG, functional group. The inserted heterologous pathway is marked in green. Generic engineering strategies are boxed in blue and annotated as 2A–2F (described in the main text). Cell Systems 2017 4, 262-275DOI: (10.1016/j.cels.2017.02.010) Copyright © 2017 Elsevier Inc. Terms and Conditions

Figure 4 Overview of Generic Engineering Strategies for Expression of Proteins in a Eukaryotic Host Cell The inserted gene and its derived mRNA and polypeptide are marked in green. Generic engineering strategies are marked in blue and annotated as 3A–3J (described in the main text). Cell Systems 2017 4, 262-275DOI: (10.1016/j.cels.2017.02.010) Copyright © 2017 Elsevier Inc. Terms and Conditions