Vibronic Enhancement of Algae Light Harvesting

Slides:



Advertisements
Similar presentations
C ontrolling Coherent Nonlinear Optical Signals of Helical Structures by Adaptive Pulse Polarizations Dmitri V. Voronine Department of Chemistry, University.
Advertisements

Date of download: 7/7/2016 Copyright © 2016 SPIE. All rights reserved. The spectral overlap of Cerulean or mTFP with Venus is compared. The excitation.
Ian Marius Peters, Haohui Liu, Thomas Reindl, Tonio Buonassisi  Joule 
Ian Marius Peters, Haohui Liu, Thomas Reindl, Tonio Buonassisi  Joule 
A Protein Dynamics Study of Photosystem II: The Effects of Protein Conformation on Reaction Center Function  Sergej Vasil’ev, Doug Bruce  Biophysical.
Volume 106, Issue 6, Pages (March 2014)
Volume 3, Issue 2, Pages (August 2017)
Mark Sayles, Ian M. Winter  Neuron 
Atsushi Matsumoto, Hisashi Ishida  Structure 
Volume 1, Issue 4, Pages (October 2016)
Volume 87, Issue 4, Pages (October 2004)
Ultrafast Transient Absorption Studies on Photosystem I Reaction Centers from Chlamydomonas reinhardtii. 2: Mutations near the P700 Reaction Center Chlorophylls.
Volume 95, Issue 2, Pages (July 2008)
Volume 108, Issue 1, Pages (January 2015)
Ultrafast Photoconversion of the Green Fluorescent Protein Studied by Accumulative Femtosecond Spectroscopy  Florian Langhojer, Frank Dimler, Gregor Jung,
Linking Electrical Stimulation of Human Primary Visual Cortex, Size of Affected Cortical Area, Neuronal Responses, and Subjective Experience  Jonathan.
Coding of the Reach Vector in Parietal Area 5d
Photocycle of Dried Acid Purple Form of Bacteriorhodopsin
Ant Navigation: One-Way Routes Rather Than Maps
Sapun H. Parekh, Young Jong Lee, Khaled A. Aamer, Marcus T. Cicerone 
Photochemical Reaction Dynamics of the Primary Event of Vision Studied by Means of a Hybrid Molecular Simulation  Shigehiko Hayashi, Emad Tajkhorshid,
Carlos R. Baiz, Andrei Tokmakoff  Biophysical Journal 
Mechanics and Buckling of Biopolymeric Shells and Cell Nuclei
Hiroshi Makino, Roberto Malinow  Neuron 
Volume 4, Issue 1, Pages (January 2018)
Marc Jendrny, Thijs J. Aartsma, Jürgen Köhler  Biophysical Journal 
Carotenoid-to-Chlorophyll Energy Transfer in Recombinant Major Light-Harvesting Complex (LHCII) of Higher Plants. I. Femtosecond Transient Absorption.
Volume 89, Issue 5, Pages (November 2005)
Cascade Models of Synaptically Stored Memories
Julia Adolphs, Thomas Renger  Biophysical Journal 
Volume 90, Issue 4, Pages (May 2016)
Jianing Yu, David Ferster  Neuron 
Thomas Akam, Dimitri M. Kullmann  Neuron 
Volume 101, Issue 4, Pages (August 2011)
Volume 113, Issue 6, Pages (September 2017)
Extracting the Excitonic Hamiltonian of the Fenna-Matthews-Olson Complex Using Three-Dimensional Third-Order Electronic Spectroscopy  Dugan Hayes, Gregory S.
Carlos R. Baiz, Andrei Tokmakoff  Biophysical Journal 
Volume 90, Issue 4, Pages (May 2016)
Georg B. Keller, Tobias Bonhoeffer, Mark Hübener  Neuron 
Volume 60, Issue 4, Pages (November 2008)
Volume 101, Issue 4, Pages (August 2011)
Protein Collective Motions Coupled to Ligand Migration in Myoglobin
Volume 2, Issue 6, Pages (June 2017)
Volume 99, Issue 2, Pages (July 2010)
Volume 95, Issue 9, Pages (November 2008)
High Sensitivity of Stark-Shift Voltage-Sensing Dyes by One- or Two-Photon Excitation Near the Red Spectral Edge  Bernd Kuhn, Peter Fromherz, Winfried.
Dissecting DNA-Histone Interactions in the Nucleosome by Molecular Dynamics Simulations of DNA Unwrapping  Ramona Ettig, Nick Kepper, Rene Stehr, Gero.
Volume 4, Issue 4, Pages (April 2018)
Attenuated Total Reflection–Fourier Transform Infrared Spectroscopy as a Possible Method to Investigate Biophysical Parameters of Stratum Corneum In Vivo 
Velocity-Dependent Mechanical Unfolding of Bacteriorhodopsin Is Governed by a Dynamic Interaction Network  Christian Kappel, Helmut Grubmüller  Biophysical.
Dynamics of Active Semiflexible Polymers
Volume 2, Issue 4, Pages (April 2017)
Protein in Sugar Films and in Glycerol/Water as Examined by Infrared Spectroscopy and by the Fluorescence and Phosphorescence of Tryptophan  Wayne W.
Volume 111, Issue 1, Pages (July 2016)
Volume 20, Issue 7, Pages (July 2012)
Volume 4, Issue 5, Pages (May 2018)
Richard Stones, Alexandra Olaya-Castro  Chem 
Bin Li, Hui-Min Wen, Wei Zhou, Jeff Q. Xu, Banglin Chen  Chem 
Volume 17, Issue 7, Pages (July 2010)
Electronically Resonant Coherent Multidimensional Vibrational Spectroscopy John C. Wright, Department of Chemistry, University of Wisconsin- Madison Coherent.
Volume 3, Issue 1, Pages 8-10 (July 2017)
Volume 4, Issue 3, Pages (March 2018)
Supratim Ray, John H.R. Maunsell  Neuron 
Volume 2, Issue 6, Pages (June 2017)
Volume 99, Issue 1, Pages (July 2010)
Superconducting cavity electro-optics: A platform for coherent photon conversion between superconducting and photonic circuits by Linran Fan, Chang-Ling.
Volume 91, Issue 4, Pages (August 2006)
Conformational Homogeneity and Excited-State Isomerization Dynamics of the Bilin Chromophore in Phytochrome Cph1 from Resonance Raman Intensities  Katelyn M.
Volume 87, Issue 6, Pages (December 2004)
Volume 3, Issue 5, Pages (November 2017)
Presentation transcript:

Vibronic Enhancement of Algae Light Harvesting Jacob C. Dean, Tihana Mirkovic, Zi S.D. Toa, Daniel G. Oblinsky, Gregory D. Scholes  Chem  Volume 1, Issue 6, Pages 858-872 (December 2016) DOI: 10.1016/j.chempr.2016.11.002 Copyright © 2016 Elsevier Inc. Terms and Conditions

Chem 2016 1, 858-872DOI: (10.1016/j.chempr.2016.11.002) Copyright © 2016 Elsevier Inc. Terms and Conditions

Figure 1 Steady-State Spectroscopy, Pigment Architecture, and Active Coherences in PC645 (A) Absorption (black, solid) and fluorescence (red) spectra of PC645 at ambient temperature and absorption spectrum at 77 K (black, dashed) with estimated pigment absorptions shown as sticks. The laser pulse spectrum is also shown (blue, shaded). (B) Crystal structure of PC645; the pigments are color coded on the basis of their approximate order in the absorption spectrum: phycocyanobilin (PCB), red; mesobiliverdin (MBV), yellow-green; and dihydrobiliverdin (DBV), blue. (C and D) Fourier-transformed spectrum of oscillatory broadband transient absorption signal (C), where orange, red, blue, and green regions denote CH wag, CH/NH bending and C–C/C–N stretching, C=NH stretching, and C=C stretching regions, respectively (D). Dashed lines indicate PCB and DBV– transition energies at 77 K. Chem 2016 1, 858-872DOI: (10.1016/j.chempr.2016.11.002) Copyright © 2016 Elsevier Inc. Terms and Conditions

Figure 2 2D Spectroscopy of PC645 2D spectra taken at 295 K (A) and 77 K (B) at selected population times and (C) the anti-diagonal evolution through dihydrobiliverdin and phycocyanobilin cross-peaks. Dashed lines indicate PCB82 and DBV– transition energies at 77 K. Chem 2016 1, 858-872DOI: (10.1016/j.chempr.2016.11.002) Copyright © 2016 Elsevier Inc. Terms and Conditions

Figure 3 2D Coherence Maps and Vibronic Coupling in PC645 (A) Rephasing and non-rephasing coherence maps for ν2 = 1,600 cm−1 at 77 K. (B and C) Simulated coherence maps for (B) 1,580 cm−1 vibrational coherence of PCB and (C) vibronic coherence formed from mixing PCB (n = 1) and DBV (n = 0). The vibronic map is for the upper vibronic state containing nominally more PCB character. (D) Energy-level diagram depicting vibrational coherence localized on the PCB pigment (left) used as the model for simulations shown in (B); coherence is generated on both the PCB ground and excited states. The diagram on the right depicts vibronic coupling between the PCB and DBV pigments used as the basis for simulations shown in (C); coherence can be generated between a vibronic state and the PCB zero-point level (vibronic coherence) or on the ground state relayed and amplified through a vibronic state. Chem 2016 1, 858-872DOI: (10.1016/j.chempr.2016.11.002) Copyright © 2016 Elsevier Inc. Terms and Conditions

Figure 4 Vibronic Coupling Enhances the Rate of Energy Transfer (A) The Förster rate as a function of energetic detuning between DBV and PCB for J = 38 cm−1. The inset shows the basis spectra for acceptor absorption (red) and donor fluorescence (blue) along with the spectral overlap (black) at 1,310 cm−1. Dashed arrows represent spectroscopic changes when vibronic intensity borrowing is considered. (B) The enhancement of the DBV-to-PCB energy-transfer rate due solely to vibronic coupling is plotted as a function of the resonance between the vibrational frequency, hν = 1,580 cm–1, and the energy gap between the DBV and PCB transitions, E0. The right plots show crude adiabatic potentials and calculated vibronic densities in the excited electronic states. We used a dimensionless displacement of 0.4 and electronic coupling of 80 cm–1 (red circles) and 40 cm–1 (black circles). Chem 2016 1, 858-872DOI: (10.1016/j.chempr.2016.11.002) Copyright © 2016 Elsevier Inc. Terms and Conditions