Protein Diffusion in the Periplasm of E. coli under Osmotic Stress

Slides:



Advertisements
Similar presentations
How Do Thermophilic Proteins and Proteomes Withstand High Temperature? Lucas Sawle, Kingshuk Ghosh Biophysical Journal Volume 101, Issue 1, Pages
Advertisements

A Hydrodynamic Model for Hindered Diffusion of Proteins and Micelles in Hydrogels Ronald J. Phillips Biophysical Journal Volume 79, Issue 6, Pages
Lever-Arm Mechanics of Processive Myosins Yujie Sun, Yale E. Goldman Biophysical Journal Volume 101, Issue 1, Pages 1-11 (July 2011) DOI: /j.bpj
The Importance of the Hook Region of the Cochlea for Bone-Conduction Hearing Namkeun Kim, Charles R. Steele, Sunil Puria Biophysical Journal Volume 107,
Cell Traction Forces Direct Fibronectin Matrix Assembly Christopher A. Lemmon, Christopher S. Chen, Lewis H. Romer Biophysical Journal Volume 96, Issue.
Quantifying the Rheological and Hemodynamic Characteristics of Sickle Cell Anemia Huan Lei, George Em Karniadakis Biophysical Journal Volume 102, Issue.
Nonlinear Poisson Equation for Heterogeneous Media Langhua Hu, Guo-Wei Wei Biophysical Journal Volume 103, Issue 4, Pages (August 2012) DOI: /j.bpj
Volume 96, Issue 1, Pages (January 2009)
Volume 94, Issue 8, Pages L67-L69 (April 2008)
Volume 111, Issue 7, Pages (October 2016)
Mechanical Stability and Reversible Fracture of Vault Particles
Volume 111, Issue 7, Pages (October 2016)
High-Density 3D Single Molecular Analysis Based on Compressed Sensing
Rapid Assembly of a Multimeric Membrane Protein Pore
Volume 93, Issue 9, Pages (November 2007)
Mechanical Properties of a Drosophila Larval Chordotonal Organ
Surface-Sensitive Raman Spectroscopy of Collagen I Fibrils
Evidence for a Common Mode of Transcription Factor Interaction with Chromatin as Revealed by Improved Quantitative Fluorescence Recovery after Photobleaching 
Volume 99, Issue 3, Pages (August 2010)
Volume 113, Issue 12, Pages (December 2017)
Florian Mueller, Tatsuya Morisaki, Davide Mazza, James G. McNally 
Dynamics of the Serine Chemoreceptor in the Escherichia coli Inner Membrane: A High- Speed Single-Molecule Tracking Study  Dongmyung Oh, Yang Yu, Hochan.
Joseph M. Johnson, William J. Betz  Biophysical Journal 
Mechanics and Buckling of Biopolymeric Shells and Cell Nuclei
Mark A. Hallen, Jianghai Ho, Christine D. Yankel, Sharyn A. Endow 
Mapping Diffusion in a Living Cell via the Phasor Approach
Zhang-Yi Liang, Mark Andrew Hallen, Sharyn Anne Endow  Current Biology 
Volume 101, Issue 7, Pages (October 2011)
Jefferson D. Knight, Joseph J. Falke  Biophysical Journal 
Homodimeric Kinesin-2 KIF3CC Promotes Microtubule Dynamics
Volume 114, Issue 5, Pages (March 2018)
Actin Cytoskeleton-Dependent Dynamics of the Human Serotonin1A Receptor Correlates with Receptor Signaling  Sourav Ganguly, Thomas J. Pucadyil, Amitabha.
Volume 110, Issue 11, Pages (June 2016)
Mechanics and Buckling of Biopolymeric Shells and Cell Nuclei
Agata Witkowska, Reinhard Jahn  Biophysical Journal 
Volume 108, Issue 6, Pages (March 2015)
Volume 110, Issue 10, Pages (May 2016)
Volume 97, Issue 11, Pages (December 2009)
Volume 97, Issue 1, Pages (July 2009)
3D Protein Dynamics in the Cell Nucleus
Volume 111, Issue 12, Pages (December 2016)
Samuel T. Hess, Watt W. Webb  Biophysical Journal 
Drift and Behavior of E. coli Cells
Volume 99, Issue 8, Pages (October 2010)
Volume 109, Issue 7, Pages (October 2015)
Quantitative Image Restoration in Bright Field Optical Microscopy
Rapid Assembly of a Multimeric Membrane Protein Pore
Volume 95, Issue 11, Pages (December 2008)
Teuta Pilizota, Joshua W. Shaevitz  Biophysical Journal 
Volume 84, Issue 1, Pages (January 2003)
Hongqiang Ma, Jianquan Xu, Jingyi Jin, Yi Huang, Yang Liu 
Volume 90, Issue 6, Pages (March 2006)
Volume 100, Issue 11, Pages (June 2011)
Satomi Matsuoka, Tatsuo Shibata, Masahiro Ueda  Biophysical Journal 
Volume 110, Issue 7, Pages (April 2016)
Chien-Jung Lo, Mark C. Leake, Richard M. Berry  Biophysical Journal 
Adam Sokolow, Yusuke Toyama, Daniel P. Kiehart, Glenn S. Edwards 
Microscopic Analysis of Bacterial Motility at High Pressure
Phospholemman Modulates the Gating of Cardiac L-Type Calcium Channels
Cyclic AMP Diffusion Coefficient in Frog Olfactory Cilia
Lipid Asymmetry in DLPC/DSPC-Supported Lipid Bilayers: A Combined AFM and Fluorescence Microscopy Study  Wan-Chen Lin, Craig D. Blanchette, Timothy V.
Volume 98, Issue 1, Pages (January 2010)
Interaction of Oxazole Yellow Dyes with DNA Studied with Hybrid Optical Tweezers and Fluorescence Microscopy  C.U. Murade, V. Subramaniam, C. Otto, Martin.
A Superresolution Census of RNA Polymerase
Eric D. Siggia, Jennifer Lippincott-Schwartz, Stefan Bekiranov 
Christina Ketchum, Heather Miller, Wenxia Song, Arpita Upadhyaya 
Plasmolysis and Cell Shape Depend on Solute Outer-Membrane Permeability during Hyperosmotic Shock in E. coli  Teuta Pilizota, Joshua W. Shaevitz  Biophysical.
Volume 109, Issue 7, Pages (October 2015)
Emmanuel O. Awosanya, Alexander A. Nevzorov  Biophysical Journal 
George D. Dickinson, Ian Parker  Biophysical Journal 
Presentation transcript:

Protein Diffusion in the Periplasm of E. coli under Osmotic Stress Kem A. Sochacki, Irina A. Shkel, M. Thomas Record, James C. Weisshaar  Biophysical Journal  Volume 100, Issue 1, Pages 22-31 (January 2011) DOI: 10.1016/j.bpj.2010.11.044 Copyright © 2011 Biophysical Society Terms and Conditions

Figure 1 Representative fluorescence images of periplasmic GFP under the various growth and upshift conditions shown. Scale bars, 1 μm. Biophysical Journal 2011 100, 22-31DOI: (10.1016/j.bpj.2010.11.044) Copyright © 2011 Biophysical Society Terms and Conditions

Figure 2 FRAP experiment on a cell grown at 280 mOsm. (a) Time series of images during FRAP. (b) Axial profile of cell before bleach, immediately after bleach, and after recovery. (c) Fourier cosine mode 1 amplitude versus time after bleach and the least-squares fit to a single-exponential decay. Scale bar, 1 μm. Biophysical Journal 2011 100, 22-31DOI: (10.1016/j.bpj.2010.11.044) Copyright © 2011 Biophysical Society Terms and Conditions

Figure 3 Histograms of cytoplasmic and periplasmic GFP diffusion coefficients measured for cells grown in (a) 1020 mOsm EZRDM, (b) 280 mOsm EZRDM, (c) 140 mOsm EZRDM, (d) 280 mOsm MBM, and (e) 280 mOsm EZRDM and hyperosmotically shocked to 650 mOsm in MBM resuspension buffer. In e, black bars represent periplasmic GFP diffusion coefficients, white bars are a repeat of the 280-mOsm EZRDM data in b, for comparison. Biophysical Journal 2011 100, 22-31DOI: (10.1016/j.bpj.2010.11.044) Copyright © 2011 Biophysical Society Terms and Conditions

Figure 4 FRAP experiment on a cell hyperosmotically shocked from 280 mOsm to 650 mOsm and exhibiting one end-cap plasmolysis space. (a) Time series of images during FRAP. The dashed line outlines the periphery of the cell. (b) Lthin, and IPS1 are shown. Lthin extends from the inner half-maximum height of the unplasmolyzed end of the cell to the half-maximum height of the peak due to the plasmolysis space. Itot is not shown but is the integrated intensity under the profile. (c) Axial profile of the cell before bleach, immediately after bleach, and after total recovery. The region within the dashed gray vertical lines corresponds to IPS1. (d) IPS1(t)/Itot(t) and least-squares fit to a single exponential recovery. Scale bar, 1 μm. Biophysical Journal 2011 100, 22-31DOI: (10.1016/j.bpj.2010.11.044) Copyright © 2011 Biophysical Society Terms and Conditions