Expanding the Range of CRISPR/Cas9 Genome Editing in Rice

Slides:



Advertisements
Similar presentations
Molecular Therapy - Nucleic Acids
Advertisements

Targeted Disruption of V600E-Mutant BRAF Gene by CRISPR-Cpf1
Figure S1. Analysis of the embryo edited using gRNA-2 and HF2-BE2
Yuming Lu, Jian-Kang Zhu  Molecular Plant 
Volume 6, Issue 4, Pages (October 2000)
Fabien Darfeuille, Cecilia Unoson, Jörg Vogel, E. Gerhart H. Wagner 
Dan Ding, Kaiyuan Chen, Yuedan Chen, Hong Li, Kabin Xie 
Volume 8, Issue 8, Pages (August 2015)
Mutation Spectrum of the Survival of Motor Neuron 1 and Functional Analysis of Variants in Chinese Spinal Muscular Atrophy  Yu-jin Qu, Jin-li Bai, Yan-yan.
Qian Chen, Ruijun Liu, Qian Wang, Qi Xie  Molecular Plant 
Volume 8, Issue 12, Pages (December 2015)
Volume 10, Issue 3, Pages (March 2017)
Harnessing the Potential of the Tea Tree Genome
Herlitz Junctional Epidermolysis Bullosa: Novel and Recurrent Mutations in the LAMB3 Gene and the Population Carrier Frequency  Aoi Nakano, Ellen Pfendner,
Comparison of High-Resolution Melting Analysis, TaqMan Allelic Discrimination Assay, and Sanger Sequencing for Clopidogrel Efficacy Genotyping in Routine.
Multiplex Gene Editing in Rice Using the CRISPR-Cpf1 System
Molecular Therapy - Nucleic Acids
Volume 12, Issue 4, Pages (April 2007)
Volume 8, Issue 4, Pages (April 2015)
Qiaoli Li, Joshua Kingman, Koen van de Wetering, Sami Tannouri, John P
Volume 9, Issue 3, Pages (November 2014)
Rapid Decoding of Sequence-Specific Nuclease-Induced Heterozygous and Biallelic Mutations by Direct Sequencing of PCR Products  Xingliang Ma, Letian Chen,
Volume 11, Issue 4, Pages (April 2018)
Transcriptional Control of the Mouse Col7a1 Gene in Keratinocytes: Basal and Transforming Growth Factor-β Regulated Expression  Michael Naso, Jouni Uitto,
Expanding the Scope of CRISPR/Cpf1-Mediated Genome Editing in Rice
Molecular Therapy - Nucleic Acids
Peter Ianakiev, Michael W
Volume 13, Issue 6, Pages (December 2013)
Detection of FLT3 Internal Tandem Duplication and D835 Mutations by a Multiplex Polymerase Chain Reaction and Capillary Electrophoresis Assay  Kathleen.
Volume 7, Issue 3, Pages (September 2016)
Fabien Darfeuille, Cecilia Unoson, Jörg Vogel, E. Gerhart H. Wagner 
RNA-Guided Genome Editing in Plants Using a CRISPR–Cas System
Volume 11, Issue 8, Pages (May 2015)
Andrew R. Bassett, Charlotte Tibbit, Chris P. Ponting, Ji-Long Liu 
Volume 10, Issue 7, Pages (July 2017)
Volume 153, Issue 4, Pages (May 2013)
Revolutionize Genetic Studies and Crop Improvement with High-Throughput and Genome-Scale CRISPR/Cas9 Gene Editing Technology  Ning Yang, Rongchen Wang,
Construction of a Genome-Wide Mutant Library in Rice Using CRISPR/Cas9
A Novel Method for Creating Artificial Mutant Samples for Performance Evaluation and Quality Control in Clinical Molecular Genetics  Michael Jarvis, Ramaswamy.
Volume 11, Issue 4, Pages (April 2018)
A Novel Point Mutation Affecting the Tyrosine Kinase Domain of the TRKA Gene in a Family with Congenital Insensitivity to Pain with Anhidrosis  Shinichi.
Founder Mutations in the Lipase H Gene in Families with Autosomal Recessive Woolly Hair/Hypotrichosis  Yutaka Shimomura, Muhammad Wajid, Abraham Zlotogorski,
Amplification Refractory Mutation System, a Highly Sensitive and Simple Polymerase Chain Reaction Assay, for the Detection of JAK2 V617F Mutation in Chronic.
Biallelic Mutations in PATL2 Cause Female Infertility Characterized by Oocyte Maturation Arrest  Biaobang Chen, Zhihua Zhang, Xiaoxi Sun, Yanping Kuang,
Volume 8, Issue 8, Pages (August 2015)
A Sequencing-Based Linkage Map of Cucumber
Volume 153, Issue 4, Pages (May 2013)
Volume 10, Issue 1, Pages (January 2017)
Genome-wide Targeted Mutagenesis in Rice Using the CRISPR/Cas9 System
Volume 10, Issue 12, Pages (December 2017)
Targeted Genome Editing in Genes and cis-Regulatory Regions Improves Qualitative and Quantitative Traits in Crops  Xitao Li, Yongyao Xie, Qinlong Zhu,
Molecular Therapy - Nucleic Acids
A Welcome Proposal to Amend the GMO Legislation of the EU
Volume 23, Issue 3, Pages (March 2015)
Volume 2, Issue 4, Pages (April 2002)
CRISPR/Cas9-Mediated Deletion of CTG Expansions Recovers Normal Phenotype in Myogenic Cells Derived from Myotonic Dystrophy 1 Patients  Claudia Provenzano,
Volume 6, Issue 4, Pages (July 2013)
Volume 5, Issue 6, Pages (November 2012)
Volume 26, Issue 6, Pages (June 2018)
Fig. 4 Gene disruption via chip.
Molecular Therapy - Methods & Clinical Development
Volume 16, Issue 11, Pages (September 2016)
Control of PHERES1 Imprinting in Arabidopsis by Direct Tandem Repeats
Volume 26, Issue 11, Pages (November 2018)
Volume 9, Issue 4, Pages (April 2016)
Wang Long , Mai Yan-Xia , Zhang Yan-Chun , Luo Qian , Yang Hong-Quan  
Gene Body CG and CHG Methylation and Suppression of Centromeric CHH Methylation are Mediated by DECREASE IN DNA METHYLATION1 in Rice  Hisataka Numa, Katsushi.
The bHLH Transcription Factors MYC2, MYC3, and MYC4 Are Required for Jasmonate- Mediated Inhibition of Flowering in Arabidopsis  Houping Wang, Yang Li,
Genome-Edited Triple-Recessive Mutation Alters Seed Dormancy in Wheat
Fig. 3 Genome editing of the MSTN gene.
Presentation transcript:

Expanding the Range of CRISPR/Cas9 Genome Editing in Rice Xixun Hu, Chun Wang, Yaping Fu, Qing Liu, Xiaozhen Jiao, Kejian Wang  Molecular Plant  Volume 9, Issue 6, Pages 943-945 (June 2016) DOI: 10.1016/j.molp.2016.03.003 Copyright © 2016 The Author Terms and Conditions

Figure 1 Genome Editing in Rice Using the VQR and VRER Cas9 Variants. (A) Schematic illustration of the generation of VQR and VRER. NLSs, nuclear localization signals. (B) PCR/RE assay of mutations around NAL1-Q2. Its PCR products were digested with PstI. Lane one is DNA markers; the last two lanes are wild-type controls digested and undigested with PstI, respectively; lines 3, 14, 15, and 18 are putative monoallelic mutants; line 19 is a putative biallelic mutant. The arrowhead indicates the bands used for identifying mutations. (C) Sequencing assay of mutations around NAL1-Q2. Line 18 is a chimera (more than one mutational type); line 19 is a biallelic homozygous mutant; the others are monoallelic mutants. The top sequence comes from the wild-type with the target (blue) and corresponding PAMs (red). A PstI site is underlined. (D) Phenotypes of the nal1 mutant. Upper is wild-type. Below is the nal1 mutant, which has a typical narrow leaf phenotype. Bar, 1 cm. (E) Mutation analyses at the target sites of the VQR variant. The biallelic mutations include the biallelic homozygous mutant and the biallelic heterozygous mutant. (F) Phenotypes of the lg1 and gl1-1 double mutant generated by VQR. Upper is wild-type. Below is the lg1 and gl1-1 double mutant. The double mutant exhibited the phenotypes of the loss of cuticular wax (indicated by red arrows), laminar joint, auricle, and ligule (indicated by yellow arrows). Bar, 1 cm. (G) Representation of the number of potentially targetable sites in the rice genome by the VQR variant, the VRER variant, and wild-type Cas9. Molecular Plant 2016 9, 943-945DOI: (10.1016/j.molp.2016.03.003) Copyright © 2016 The Author Terms and Conditions