Volume 25, Issue 7, Pages 1153-1162.e4 (July 2017) Molecular Switches of Allosteric Modulation of the Metabotropic Glutamate 2 Receptor Laura Pérez-Benito, Maarten L.J. Doornbos, Arnau Cordomí, Luc Peeters, Hilde Lavreysen, Leonardo Pardo, Gary Tresadern Structure Volume 25, Issue 7, Pages 1153-1162.e4 (July 2017) DOI: 10.1016/j.str.2017.05.021 Copyright © 2017 Elsevier Ltd Terms and Conditions
Structure 2017 25, 1153-1162.e4DOI: (10.1016/j.str.2017.05.021) Copyright © 2017 Elsevier Ltd Terms and Conditions
Figure 1 Selected mGlu2 Receptor PAMs 1–3 and NAMs 4–6 Structure 2017 25, 1153-1162.e4DOI: (10.1016/j.str.2017.05.021) Copyright © 2017 Elsevier Ltd Terms and Conditions
Figure 2 Key Interactions for PAMs and NAMs Pharmacophore models of PAMs (A) and NAMs (B) of the mGlu2 receptor. The structural features of the pharmacophore models are shown on the top panels, whereas the predicted amino acids in the mGlu2 receptor, determined by a combination of docking/MD simulations (Figure 3) and mutagenesis experiments (Tables 2 and 3) are shown on the bottom panels. See also Figure S3 for application to mGlu1 receptor. Structure 2017 25, 1153-1162.e4DOI: (10.1016/j.str.2017.05.021) Copyright © 2017 Elsevier Ltd Terms and Conditions
Figure 3 The Binding Mode of mGlu2 Allosteric Modulators Detailed view of the binding mode of PAMs 1 (A) green, 2 (B), blue, and 3 (C) yellow and NAMs 4 (D) magenta, 5 (E) orange, and 6 (F) red to the mGlu2 receptor. Amino acids involved in the binding of ligands, as determined by site-directed mutagenesis experiments reported in Tables 2 and 3 are shown in white, whereas S7977.41a.35c that was reported for the binding of NAMs to mGlu5 receptor (Gregory et al., 2014) is shown in green. See also Figure S9. Structure 2017 25, 1153-1162.e4DOI: (10.1016/j.str.2017.05.021) Copyright © 2017 Elsevier Ltd Terms and Conditions
Figure 4 Receptor Side-Chain Movements in Response to NAMs and PAMs Distribution of the positions of representative atoms (CZ of F6433.36a.40c, ND2 of N7355.47a.47c, and NE1 of W7736.48a.50c) (A and B) and (OH of Y6473.40a.44c, CD2 of L7385.50a.50c, CG2 of I7395.51a.51c, and OG1 of T7696.44a.46c) (E and F) of the amino acids of mGlu2 receptor at the homologous positions of the “trigger switch” and “transmission switch” of class A, respectively, during MD simulations of the active-like model of mGlu2 receptor in complex with Gi and PAMs 1–3 (B and F) and of the “inactive” model in complex with NAMs 4–6 (A and E). Evenly spaced snapshots extracted from the 1 μs of unbiased MD simulations are depicted. PAMs 1–3 are shown in green, blue and yellow and NAMs 4–6 are shown in magenta, orange, and red, respectively. Time-evolution of the χ1 rotamer of W7736.48a.50c and T7696.44a.46c for NAMs 4–6 (C and G) and PAMs 1–3 (D and H) during the MD simulations (line color matches with the bound ligand). See also Figures S7 and S8 for application to mGlu1 and mGlu5 receptors. Structure 2017 25, 1153-1162.e4DOI: (10.1016/j.str.2017.05.021) Copyright © 2017 Elsevier Ltd Terms and Conditions
Figure 5 Comparison of the Mechanism of Positive and Negative Allosteric Modulation at the mGlu2 Receptor Relative position of the “trigger switch” amino acids involved in the initial agonist-induced structural changes on the receptor responsible for the rearrangement of the “transmission switch” amino acids that finally lead to receptor activation during MD simulations of PAM 1 (in green) and NAM 6 (in red) (see legend of Figure 4 for details of the MD simulations and the atoms depicted). Structure 2017 25, 1153-1162.e4DOI: (10.1016/j.str.2017.05.021) Copyright © 2017 Elsevier Ltd Terms and Conditions
Figure 6 Mutation of Transmission Switch Amino Acids and Effect on Functional Glutamate-Induced [35S]GTPγS Binding Curves show the glutamate concentration response for mutants Y6473.40a.44cA/F and T7696.44a.46cA/S. Error bars show SDs. Structure 2017 25, 1153-1162.e4DOI: (10.1016/j.str.2017.05.021) Copyright © 2017 Elsevier Ltd Terms and Conditions