Dendrogram constructed on the basis of RiboPrint pattern types obtained for 13 complement-sensitive and 2 complement-resistant strains of M. catarrhalis.

Slides:

Advertisements

Similar presentations

Technology from seed Computer Assisted Analysis of Pulsed-field Gel Electrophoresis gels João André Carriço 40th ESCMID Postgraduate.

Advertisements

Laboratory investigation for clonality of a foodborne outbreak due to

Escherichia coli O104:H4 south-west France, June 2011

S. Le Hello, V Falcot, F Lacassin, F Baumann, P Nordmann, T Naas

Salmonella genomic island 1-J variants associated with change in the antibiotic resistance gene cluster in multidrug-resistant Salmonella enterica serovar.

HSP65-PRA identification of non-tuberculosis mycobacteria from 4892 samples suspicious for mycobacterial infections M. Saifi, E. Jabbarzadeh, A.R. Bahrmand,

Displaying the diversity in the natural history of infections of Pseudomonas aeruginosa in patients with non-cystic fibrosis bronchiectasis including:

Evidence of genotypic diversity among Candida auris isolates by multilocus sequence typing, matrix-assisted laser desorption ionization time-of-flight.

PCR ribotyping and arbitrarily primed PCR for the comparison of enterotoxigenic Bacteroides fragilis strains from two Polish university hospitals Gayane.

Cluster diagram for four patient pairs with genotyped strains sharing the same sequence typing (ST). Cluster diagram for four patient pairs with genotyped.

Phylogenetic analysis of 3,582 HAV isolates in the VP1/P2B region (315-bp fragment). Phylogenetic analysis of 3,582 HAV isolates in the VP1/P2B region.

Itraconazole tissue and fluid concentrations in humans as multiples of the maximal or simultaneously measured concentration in plasma (μg/ml) after systemic.

Lack of phylogenetic conservatism of Bacillus anthracis plasmid copy number. Lack of phylogenetic conservatism of Bacillus anthracis plasmid copy number.

C. Silva-Costa, F.R. Pinto, M. Ramirez, J. Melo-Cristino

Comparative phylogenetic analysis of sapoviruses based on complete RdRp and VP1 nucleotide sequences. Comparative phylogenetic analysis of sapoviruses.

Voriconazole tissue and fluid concentrations in humans as multiples of the maximal or simultaneously measured concentration in plasma (μg/ml) after systemic.

Functional range and environmental niches of the Pseudomonas genus, highlighting the broad distribution of the P. fluorescens species complex. Functional.

Phylogenetic tree constructed by the neighbor-joining method, showing the position of Peptostreptococcus species within Clostridium rRNA clusters XI, XIII,

Phylogenetic tree showing generic and species positions based on Bayesian analysis of the nuclear ribosomal DNA 28S region (1,200 bp) of Schistosomatidae.

Phylogenetic tree of 38 Pseudomonas type strains, based on the V3-V5 region sequence of the 16S rRNA gene (V3 primer, positions 442 to 492; and V5 primer,

Species diversity within the P. fluorescens species complex.

Genetic relatedness between group B streptococci originating from bovine mastitis and a human group B streptococcus type V cluster displaying an identical.

Electron micrographs of the binding of human vitronectin to complement-resistant (left) and complement-sensitive (right) strains of M. catarrhalis. Electron.

L. R. Ásmundsdóttir, H. Erlendsdóttir, A. L. Gísladóttir, M

Columbia blood agar plate showing an isogenic S

Phylogenetic comparison of the capsule biosynthesis (cap) gene locus among selected Pasteurella multocida strains. Phylogenetic comparison of the capsule.

Approximate numbers of cases per 100,000 individuals caused by penicillin resistance for each year (left). Approximate numbers of cases per 100,000 individuals.

A. Carannante, G. Prignano, M. Cusini, A. Matteelli, I. Dal Conte, V

Phylogenetic tree. Phylogenetic tree. Shown are circle phylogram relationships for known genotypes of HRV-A, HRV-B, and HRV-C. The tree was calculated.

Glucose concentration-dependent increase of melanin synthesis.

Identification of the major molecular types within C. gattii.

Rooted neighbor-joining tree inferred from the concatenated MLST typing scheme sequences (CAP59, GPD1, LAC1, SOD1, URA5, and PLB1 genes and IGS) of 10.

Data from in vitro competition experiments with E

Phylogenetic comparison among selected Pasteurella multocida and Haemophilus influenzae species with completed genome sequences. Phylogenetic comparison.

Increasing prevalence of multidrug resistance among P

Examples of changes in colony morphology that can occur with hVISA and VISA strains. Examples of changes in colony morphology that can occur with hVISA.

Positivity rates and concordance of multiplex PCR and blood culture (BC) results from 27 published studies. Positivity rates and concordance of multiplex.

Fluconazole tissue and fluid concentrations in humans as multiples of the maximal or simultaneously measured concentration in plasma (μg/ml) after systemic.

Number of outbreaks associated with drinking water by water system type and year (n = 780), 1971 to “Other” includes outbreaks associated with bottled.

Percentages of outbreak deficiencies (n = 671) in public water systems (n = 656) by time period, 1971 to 2006, excluding outbreaks associated with Legionella.

Phylogenetic network with concatenated 16S rRNA, 23S rRNA, groEL, rpoB, and dnaK sequences (3,009 unambiguously aligned base pairs), including 71 Coxiella-like.

MLEE-based taxonomy of the Leishmania genus as listed by Schönian et al. MLEE-based taxonomy of the Leishmania genus as listed by Schönian et al. (21),

Genogroup and genotypes of GI, GII, GIII, GIV, and GV sapovirus strains based on complete VP1 nucleotide sequences. Genogroup and genotypes of GI, GII,

Number of outbreaks associated with drinking water by system type and month (n = 762), 1971 to 2006, excluding outbreaks associated with commercially bottled.

Percentages of 256 clinical isolates obtained from immunocompetent and immunocompromised patients (HIV positive) and from patients with other risk factors.

Fabrizio Dutly, and Martin Altwegg Clin. Microbiol. Rev. 2001; doi:10

Amoeba culturing methods for recovering amoeba-resisting microorganisms (ARMs). Amoeba culturing methods for recovering amoeba-resisting microorganisms.

TNF-α inhibits CMV MIEP activity in human astrocytes.

Diagnostic tools for intestinal pathogenic E. coli.

Hector H. García et al. Clin. Microbiol. Rev. 2002; doi: /CMR

Dendrogram of the genus Serratia, constructed using the neighbor-joining method in MicroSeq software. 16S rRNA gene sequences of type strains of the species,

Minimum-spanning-tree analysis of 59 C

Serial testing with IGRAs reveals underlying phenotypes.

Roberta B. Carey et al. Clin. Microbiol. Rev. 2018; doi: /CMR

Various possible courses of the immune response to severe sepsis and septic shock over 28 days. Various possible courses of the immune response to severe.

Western blot assay of an acute MIF-positive serum showing reactivity with the 135- and 115-kDa specific protein antigens of Rickettsia conorii and Rickettsia.

The Scorpions primer is an extension of molecular beacons.

General overview of innate and adaptive immune responses to and regulation of black yeasts. General overview of innate and adaptive immune responses to.

Phylogenetic trees for fusion (F) and attachment (G) genes of selected HMPV isolates. Phylogenetic trees for fusion (F) and attachment (G) genes of selected.

Fluconazole zone diameter distributions for all Candida spp

Adherence patterns of enteropathogenic E

Relationship between MIC, dose of fluconazole, and emergence/expression of specific resistance mechanisms in oropharyngeal candidiasis. •, MIC of fluconazole.

Phylogenetic tree of the complete genomes of 27 representative human (black) and camel (red) MERS-CoV strains rooted by NeoCoV (KC ). Phylogenetic.

Distribution of the four major molecular types of C

The Alp family of proteins.

Comparison of the van gene clusters.

Schematic representation of the relationships between acid resistance (urease activity and urea transport), nitrogen metabolism (ammonia production), metal.

Microarray transcriptional heat map analysis of cell wall stimulon activation of hVISA/VISA (defined by population analysis and vancomycin broth MIC) relative.

Effects of acute malnutrition on lymphoid and hematopoietic organs.

Example of population analysis profile curves for vancomycin-susceptible and heterogeneous vancomycin-intermediate S. aureus strains. Example of population.

Presentation transcript:

Dendrogram constructed on the basis of RiboPrint pattern types obtained for 13 complement-sensitive and 2 complement-resistant strains of M. catarrhalis (235). Dendrogram constructed on the basis of RiboPrint pattern types obtained for 13 complement-sensitive and 2 complement-resistant strains of M. catarrhalis (235). Selected were those RiboPrint patterns that are representative of the diverse genogroups that could be identified. The resistant strains appear to be a more homogeneous group (only 2 closely related types encountered among 47 strains) than are the complement-sensitive strains. The tree was constructed in the BioNumerics program developed by Applied Maths (Kortrijk, Belgium). On the basis of Pearson coefficients and unweighted pair group method using arithmetic averages (UPGMA), patterns were normalized using molecular size markers coanalyzed during pattern creation. The 40 to 100 scale above the dendrogram indicates the percent identity between fingerprints compared. The fully automated RiboPrinter has been developed and marketed by Qualicon, a Dupont subsidiary (Warwick, United Kingdom). Cees M. Verduin et al. Clin. Microbiol. Rev. 2002; doi:10.1128/CMR.15.1.125-144.2002