Features of the LIMT gene and RNA abundance in cell lines of different tissues of origin Features of the LIMT gene and RNA abundance in cell lines of different.

Slides:



Advertisements
Similar presentations
Date of download: 6/21/2016 Copyright © 2016 American Medical Association. All rights reserved. From: Epigenetic Signatures of Autism: Trimethylated H3K4.
Advertisements

Accumulation of transcripts from MULE‐F19G14–CyP40 and transposons in mom1 and ddm1. Accumulation of transcripts from MULE‐F19G14–CyP40 and transposons.
DNase‐HS sites are main independent determinants of DNA replication timing Simulations based on genome sequence features (GC content, CpG islands), or.
An siRNA screen identifies LIMT as an ERK‐dependent negative regulator of mammary cell migration An siRNA screen identifies LIMT as an ERK‐dependent negative.
Periodic changes in distribution of ERK–GFP fusion protein in cells after stimulation with EGF. (A) Confocal image of cells expressing ERK–GFP both before.
MiR‐10b* down‐regulates the expression of BUB1, PLK1 and CCNA2 proteins in breast cancer cell lines.A.SPIN‐ordered expression matrix of miR‐10b* and its.
GLUT3 is a direct target of TCF4/β‐catenin
Amino‐acid sequence of the heterogeneous nuclear RNP G protein family and RNA‐binding SELEX consensus sequence obtained for human RBMY. (A) Sequence alignment.
Motif detectability corresponds to the phylogenetic profile of the cognate transcription factor. Motif detectability corresponds to the phylogenetic profile.
The gene encoding TP53INP1 is expressed in pancreatic endocrine cells A, B(A, B) Immunocytofluorescent staining of TP53INP1 (red) and insulin (green) in.
H3K4me3 pattern association with functionally relevant genes and changes over time. H3K4me3 pattern association with functionally relevant genes and changes.
AAV8‐hAAT‐FGF21 treatment improves liver fibrosis
High-Resolution Profiling of Histone Methylations in the Human Genome
CAR T cell dose and percentages of CAR‐positive cells within CAR T cell products CAR T cell dose and percentages of CAR‐positive cells within CAR T cell.
VAP‐A is recruited to interorganelle contact sites together with MOSPD2 VAP‐A is recruited to interorganelle contact sites together with MOSPD2 AHeLa cells.
Anna Kloc, Mikel Zaratiegui, Elphege Nora, Rob Martienssen 
Both haematopoietic and non‐haematopoietic compartments are involved in myocarditis development.A.Kaplan‐Meier survival curves showing survival of bone.
HS induces sustained H3K4me3 and H3K4me2 methylation at HSP22
Clinical testing of calcineurin inhibitors cyclosporine A and tacrolimus in autoimmune disorders Clinical testing of calcineurin inhibitors cyclosporine.
IRE1 signaling signatures in glioblastoma multiform
RASGRP1 is required for T‐cell expansion in response to CD3‐TCR activation RASGRP1 is required for T‐cell expansion in response to CD3‐TCR activation Rescue.
Expression of PD‐1 on PBMC and malignant exudate T cells
The upstream region of MUC5AC bound by SPDEF is required for the expression of MUC5AC in human lung cancer cells The upstream region of MUC5AC bound by.
Identification of miR‐499 targets
MOSPD2 is a putative tail‐anchored protein
Epigenetic regulation of miR-193b in liposarcomagenesis.
Validation of astrocyte and microglial proteomic markers that increase across the ALS‐FTD spectrum Validation of astrocyte and microglial proteomic markers.
Chromatin regulation upon recruitment of HOTAIR
Identification of essential genome features.
LIMD1 expression is regulated by hypoxia
The transcript profiles in the three human cell lines based on RNA sequencing (RNA‐seq). The transcript profiles in the three human cell lines based on.
Volume 23, Issue 1, Pages 9-22 (January 2013)
Properties of proteins and residues with frequent hotspot mutations
Histone deacetylase 1 protein depletion affects general histone acetylation and specific gene expression. Histone deacetylase 1 protein depletion affects.
The ERK pathway mediates the effect of EGF on LIMT, which normally inhibits mammary cell migration and invasion The ERK pathway mediates the effect of.
Volume 130, Issue 1, Pages (July 2007)
Volume 39, Issue 6, Pages (September 2010)
Chromosome 8 cDNA microarray gene expression profile of the amplified regions of 8p11–12 in SUM-44, -52, and -225 cells versus MCF10A HME control cells.
Fmrp regulates E‐cadherin and Vimentin in breast cancer cells Fmrp (red) and E‐cadherin (green) detection by I.F. in 4T1 cells expressing different Fmrp.
Comparison of proteomics and RNA‐Seq data.
Gene targeting of the therapeutic EGFP/PGK‐FANCA donor in the AAVS1 locus of HD CD34+ cells Gene targeting of the therapeutic EGFP/PGK‐FANCA donor in the.
GPR120 deficiency alters the expression of genes involved in glucose and lipid metabolism in BAT GPR120 deficiency alters the expression of genes involved.
Design and optimization of the computational model.
Antisense‐mediated regulation of SUR7.
Volume 16, Issue 6, Pages (December 2012)
WES identification of heterozygous compound mutations in ALPI
Epigenetic Control of the S100A6 (Calcyclin) Gene Expression
Scheme of FGF‐dependent regulation of TGFβ signaling in smooth muscle cells and endothelial cells Scheme of FGF‐dependent regulation of TGFβ signaling.
A multitiered approach to characterize transcriptome structure.
Oligo#5 enters neurons after ICV injection, changes 5HT2C splicing and food intake Oligo#5 enters neurons after ICV injection, changes 5HT2C splicing and.
Drp1 knockdown prevents mitophagy
WES identification of heterozygous compound mutations in ALPI
Divergent Transcription from Active Promoters
XBP1s and RIDD of mRNA signals in GBM
Re‐expression of the AXIN1 coding sequence re‐sensitizes VACO6R cells to PORCN inhibition Re‐expression of the AXIN1 coding sequence re‐sensitizes VACO6R.
The transcriptional behavior of GREB1 changes with estrogen dose and exhibits considerable cell‐to‐cell variation (see also Fig EV2 and Movie EV2)‏ The.
Genomewide profiling of chromatin accessibility in prostate cancer specimens Genomewide profiling of chromatin accessibility in prostate cancer specimens.
Effect of rare SVs on cardiac transcription in DCM
Tangle formation and downregulation of miR‐132‐3p in LOAD A‐G
Study design Study design DNA and total RNA of DCM patients were isolated from left ventricular myocardial biopsies and peripheral blood. Next‐generation.
Histone modifications mark dynamically regulated genes.
Influence of RdDM on DCL4 Transcript Isoform Expression.
Volume 11, Issue 7, Pages (May 2015)
Correlation of miR-21 expression levels with DEGs in 28 bladder cancer cell lines. Correlation of miR-21 expression levels with DEGs in 28 bladder cancer.
Histone modification status at the Tβ4 promoter and at the protein level in the HuH7 sublines. Histone modification status at the Tβ4 promoter and at the.
BRD4 expression and genomic distribution in B-CLL.
Fig. 7. JQ1 represses the enhancer-promoter interaction of BRCA1.
H3K36me3 is not essential for LEDGF and MLL target gene occupancy.
Integrated analysis of gene expression and copy number alterations.
Mutant TERT promoter displays active histone marks and distinct long-range interactions: A, cell lines that were used in the study with their origin and.
Presentation transcript:

Features of the LIMT gene and RNA abundance in cell lines of different tissues of origin Features of the LIMT gene and RNA abundance in cell lines of different tissues of origin Schematic representation of the annotated RefSeq gene models of LIMT (NR_002809; chromosome 12q24.31) and the neighboring protein‐coding genes (RHOF and SETD1B). Arrows denote direction of transcription (note that LIMT resides on the minus strand). Also shown is the distribution of evolutionary conservation along the sequence of LIMT across 100 vertebrate species. Note that the 5′ region of LIMT is highly conserved (green rectangle). Promoter‐associated histone methylation (H3K4Me3) and acetylation (H3K27Ac3) were obtained in MCF7 and MCF10A cells, respectively (see Materials and Methods). Acetylation signals were obtained for MCF10A cells stimulated with EGF for 20 min (green), or unstimulated (black; overlaying histogram). Note that stimulation with EGF caused a decrease in acetylation at the promoter region (red rectangle).Expression of LIMT was determined in a panel of 44 cancer and non‐cancer cell lines using real‐time qPCR. Expression levels were normalized to the GAPDH transcript and presented in arbitrary units (A.U.). N, non‐cancer cell line. Aldema Sas‐Chen et al. EMBO Mol Med. 2016;emmm.201606198 © as stated in the article, figure or figure legend