Comparison of PCR-based methods for typing Escherichia coli

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Presentation transcript:

Comparison of PCR-based methods for typing Escherichia coli D. Jonas, B. Spitzmüller, K. Weist, H. Rüden, F.D. Daschner Clinical Microbiology and Infection Volume 9, Issue 8, Pages 823-831 (August 2003) DOI: 10.1046/j.1469-0691.2003.00661.x Copyright © 2003 European Society of Clinical Infectious Diseases Terms and Conditions

Figure 1 Fluorigram view of the AFLP banding patterns of type strain ATCC 11775 from six independent experiments. Arrows denote visually missing ‘certain’ bands. Clinical Microbiology and Infection 2003 9, 823-831DOI: (10.1046/j.1469-0691.2003.00661.x) Copyright © 2003 European Society of Clinical Infectious Diseases Terms and Conditions

Figure 2 Computer-based comparison of the first AFLP fingerprint with the subsequent five reproducibility experiments (see Figure 1). Percentages of similarity were calculated as Pearson correlation (black bars), Dice coefficients including all bands (hatched bars), and Dice coefficients ignoring uncertain bands (empty bars). Clinical Microbiology and Infection 2003 9, 823-831DOI: (10.1046/j.1469-0691.2003.00661.x) Copyright © 2003 European Society of Clinical Infectious Diseases Terms and Conditions