2006 Summer PrWeek Slicer3 for Image Guided Therapy (IGT): Convert vtkMRAblation and vtkFMRIEngine to Slicer3 modules. Team Plan/Expected Challenges/Publication.

Slides:



Advertisements
Similar presentations
© NIH National Center for Image-Guided Therapy, November, 2008 System Set-up for the Integration of BrainLab, BioImage Suite and Slicer3 Haiying Liu Surgical.
Advertisements

NCIGT NIH National Center for Image-Guided Therapy System Test for the Integration of Brainlab, BioImage Suite and Slicer3 Haiying.
© NIH National Center for Image-Guided Therapy, November, 2008 Visualization of DTI Tractography while Tracking by BrainLab System Haiying Liu Surgical.
Image Guided Therapy in Slicer3 Planning for Image Guided Neurosurgery Nobuhiko Hata, Ph.D. Slicer3 Training Compendium Neurosurgery Tutorial, N. Hata.
Image Guided Therapy in Slicer3
© NIH National Center for Image-Guided Therapy, November, 2008 System Test for the Integration of Brainlab, BioImage Suite and Slicer3 Haiying Liu Surgical.
Recipe for ??????????????????????????????? What you will make Ingredients What to do
Brigham and Women’s Hospital Image Guided Therapy Program.
Slicer User Training 101 IGT Edition Haiying Liu Nobuhiko Hata.
3D Slicer in Image Guided Therapy Nobuhiko Hata, PhD Brigham and Women’s Hospital.
Surgical Planning Laboratory Brigham and Women’s Hospital Boston, Massachusetts USA a teaching affiliate of Harvard Medical School 3D Slicer And The NA-MIC.
NA-MIC National Alliance for Medical Image Computing CMR Toolkit Threshold Model Module Salma Bengali, Alan Morris, Josh Cates, Rob.
© NIH National Center for Image-Guided Therapy, March 2008 IGT Clinical Workshop Non-Rigid, Multi-Modality Image Registration for Thermal Ablation: Non-Rigid,
NA-MIC National Alliance for Medical Image Computing Interactive Editor tutorial Sonia Pujol, Ph.D. Surgical Planning Laboratory Harvard.
NA-MIC National Alliance for Medical Image Computing Core 1b – Engineering End-user Platform Steve Pieper Isomics, Inc.
Surgical Planning Laboratory Brigham and Women’s Hospital Boston, Massachusetts USA a teaching affiliate of Harvard Medical School Visit of Barbara Alving,
NA-MIC National Alliance for Medical Image Computing Slicer for Neurosurgical Planning IBMSPS th Annual World Congress for Brain.
SlicerRT Hands-on tutorial Csaba Pinter Laboratory for Percutaneous Surgery, Queen’s University, Canada.
NA-MIC National Alliance for Medical Image Computing The NA-MIC Kit National Alliance for Medical Image Computing.
Image-guided therapy and medical robotics tutorial using a LEGO Mindstorms NXT robot and 3D Slicer Danielle F. Pace, B.CmpH Ron Kikinis, M.D. Nobuhiko.
NA-MIC National Alliance for Medical Image Computing NAMIC Engineering Activities September 8, 2005.
3D Slicer: A Free & Open Source Platform For Medical Image Analysis and Visualization Brigham and Women’s Hospital.
Workflow based Slicer IGT Module : Tutorial Andinet Enquobahrie, PhD Kitware Inc December, 2008.
National Alliance for Medical Image Computing Slicer3 Status Update.
National Alliance for Medical Image Computing Project Week June 26-30, 2006 Participants: 56 NA-MIC (38), Collaborators (18) –NA-MIC:
Surgical Planning Laboratory Brigham and Women’s Hospital Boston, Massachusetts USA a teaching affiliate of Harvard Medical School Overview Ron Kikinis,
National Alliance for Medical Image Computing Programming Half-Week January 2006 Clinical/End-User Applications Rule Based Segmentation.
NA-MIC National Alliance for Medical Image Computing Training & Outreach Sonia Pujol, PhD Co-P.I. Randy Gollub, MD, PhD P.I.
Image Guided Therapy in Slicer3 Planning for Image Guided Neurosurgery Nobuhiko Hata, PhD Slicer3 Training Compendium Neurosurgery Tutorial, N. Hata.
DICOM to NRRD Conversion Tutorial Martin Styner 1 University of North Carolina Neuro Image Research and Analysis Lab.
NA-MIC National Alliance for Medical Image Computing Outreach Randy L. Gollub, MD, PhD Cores 5/6: Training & Dissemination Representing.
NA-MIC National Alliance for Medical Image Computing The NA-MIC Kit: ITK, VTK, Pipelines, Grids and 3D Slicer as An Open Platform for.
NA-MIC National Alliance for Medical Image Computing Registering Image Volumes in Slicer Steve Pieper.
National Alliance for Medical Image Computing Project Half Week January 10/12, 2007 Held in Conjunction with AHM 2007 AHM Participants:
Geography Flip Books 6 th Grade Social Studies Shiloh Middle School Mr. Christman.
NA-MIC National Alliance for Medical Image Computing 3D Slicer and the NA-MIC Kit for IGT Research Steve Pieper, PhD NAC, SPL, NA-MIC,
NA-MIC National Alliance for Medical Image Computing Isomics, Inc. Steve Pieper.
Image Guided Therapy in Slicer3 Planning for Image Guided Neurosurgery Nobuhiko Hata, Ph.D. Slicer3 Training Compendium Neurosurgery Tutorial, N. Hata.
Neuroimage Analysis Center An NCRR National Resource Center NAC Engineering Core Steve Pieper, Core PI SPL; Isomics, Inc.
nfo/repcat/arcinfo/index.html Files here are in e00 format.
NA-MIC National Alliance for Medical Image Computing Programming Week Kickoff MIT, June 27, 2005.
NA-MIC National Alliance for Medical Image Computing Slicer Progress in 2009 Steve Pieper, Ph.D.
Standard Response Evaluation Criteria in Solid Tumors (RECIST) using 3D Slicer Slicer3 Training Compendium Image here. Jeffrey Yap, PhD Wendy Plesniak,
Slicer for Image Guided Therapy Haying Liu Lead Engineer Nobuhiko Hata Simon DiMaio (Prostate robot proj) Raimundo Sierra (Neuroend0scope navi proj)
Slicer 101 IGT Edition Haiying Liu, M.S. Nobuhiko Hata, Ph.D.
Fiber Bundle Volume Measurement
2007 Project Half Week ITK Registration Parallelization: Develop implementations of ITK registration methods to take advantage of multi-core and multi-processor.
From Scalars to Tensors: How to add new volume types?
Shape Analysis: Description &Framework Develop a generally applicable description for statistical shape analysis studies, as well as a computational framework.
Riemannian DTI Filters: Develop algorithms and ITK modules for basic image processing on tensor fields using Riemannian approaches. Team Plan/Expected.
Team Plan/Expected Challenges
RSNA2012 Quantitative Imaging Reading Room
Ron Kikinis, MD Professor of Radiology, Harvard Medical School
Core 1b – Engineering Data and Clinical Interface
DLPFC Semi-automatic Segmentor: With minimal user interaction, this rule-based algorithm will segment the DLPFC from an input volume. This is a Slicer.
These two sections should be completed by Jan 31, 2006.
Scripts to combine UNC Shape Analysis with Spherical Wavelet Features
2006 Summer PrWeek Slicer3 UI: Design and implement Slicer3’s UI; provide C++ infrastructure for module UI development. Team Plan/Expected Challenges/Publication.
Ron Kikinis, MD Professor of Radiology, Harvard Medical School
2007 Project Half Week Transition of Slicer2.x Modules to Slicer3: FreeSurfer Integration of FreeSurfer scalar overlays and colour lookup tables into Slicer3.
Transition of Slicer2.x Modules to Slicer3: Fiducials
Mapped Hexahedral Meshing: Evaluate the use of multi-resolution itk::fem registration for mapped meshing Team Plan/Expected Challenges/Publication Ritesh.
Grid Interface for Slicer3: Make Slicer 3 work on a set of clusters.
LONI Pipeline Integration/ UNC shape analysis
Slicer Timeline GUI Thread Processing Thread
2007 Project Half Week Transition of Slicer2.x Modules to Slicer3: ModelMaker Extend ModelMaker to use MRML Color nodes. Team Plan/Expected Challenges/Publication.
Mesh Untangling: 2006 Summer PrWeek Team
2006 Summer PrWeek Correspondence Based on Local Curvature: Developing methods in ITK for using local curvature features to establish population based.
Interactive Editor tutorial
Miles to Kilometers problem
Presentation transcript:

2006 Summer PrWeek Slicer3 for Image Guided Therapy (IGT): Convert vtkMRAblation and vtkFMRIEngine to Slicer3 modules. Team Plan/Expected Challenges/Publication Algorithms: Noby Hata, BWH (software) Haiying Liu, BWH (software) Steve Pieper, Isomics (software) Jim Miller, GE (software) Software: Build Slicer3 modules for IGT applications. Clinical: Accomplished by end of Programming Week (Add picture to illustrate accomplishment) MRAblation has been converted to Slicer3 loaded module. It has been tested using different data sets. Thermal maps (output volumes) look the same as (similar to) those from Slicer2.6 Place your picture/movie here.