Volume 111, Issue 6, Pages (September 2016)

Slides:



Advertisements
Similar presentations
Volume 103, Issue 5, Pages (September 2012)
Advertisements

Volume 113, Issue 9, Pages (November 2017)
Stephen R. Norris, Marcos F. Núñez, Kristen J. Verhey 
Dynamics of Active Semiflexible Polymers
F. Benedetti, C. Micheletti, G. Bussi, S.K. Sekatskii, G. Dietler 
Nonperturbative Chemical Imaging of Organelle Transport in Living Cells with Coherent Anti-Stokes Raman Scattering Microscopy  Xiaolin Nan, Eric O. Potma,
Lara Scharrel, Rui Ma, René Schneider, Frank Jülicher, Stefan Diez 
Praveen D. Chowdary, Daphne L. Che, Kai Zhang, Bianxiao Cui 
One-Dimensional Brownian Motion of Charged Nanoparticles along Microtubules: A Model System for Weak Binding Interactions  Itsushi Minoura, Eisaku Katayama,
Joseph M. Johnson, William J. Betz  Biophysical Journal 
Nathan L. Hendel, Matthew Thomson, Wallace F. Marshall 
Volume 27, Issue 18, Pages e6 (September 2017)
Volume 28, Issue 9, Pages e4 (May 2018)
Volume 96, Issue 3, Pages (February 2009)
Volume 111, Issue 2, Pages (July 2016)
Is Aggregate-Dependent Yeast Aging Fortuitous
Modes of Diffusion of Cholera Toxin Bound to GM1 on Live Cell Membrane by Image Mean Square Displacement Analysis  Pierre D.J. Moens, Michelle A. Digman,
Volume 101, Issue 2, Pages (July 2011)
Optical Pushing: A Tool for Parallelized Biomolecule Manipulation
Megan T. Valentine, Steven M. Block  Biophysical Journal 
Homodimeric Kinesin-2 KIF3CC Promotes Microtubule Dynamics
Volume 96, Issue 2, Pages (January 2009)
Qiaochu Li, Stephen J. King, Ajay Gopinathan, Jing Xu 
Coarse-Grained Peptide Modeling Using a Systematic Multiscale Approach
Volume 107, Issue 6, Pages (September 2014)
Roop Mallik, Dmitri Petrov, S.A. Lex, S.J. King, S.P. Gross 
Kinetic and Energetic Analysis of Thermally Activated TRPV1 Channels
Ambarish Kunwar, Michael Vershinin, Jing Xu, Steven P. Gross 
Kinesin Moving through the Spotlight: Single-Motor Fluorescence Microscopy with Submillisecond Time Resolution  Sander Verbrugge, Lukas C. Kapitein, Erwin.
Adaptive Response of Actin Bundles under Mechanical Stress
V.M. Burlakov, R. Taylor, J. Koerner, N. Emptage  Biophysical Journal 
Stationary Gating of GluN1/GluN2B Receptors in Intact Membrane Patches
Modeling Diverse Range of Potassium Channels with Brownian Dynamics
Volume 103, Issue 2, Pages (July 2012)
Martin Clausen, Michael Koomey, Berenike Maier  Biophysical Journal 
Volume 90, Issue 8, Pages (April 2006)
G. Garbès Putzel, Mark J. Uline, Igal Szleifer, M. Schick 
Volume 103, Issue 3, Pages (August 2012)
Stochastic Pacing Inhibits Spatially Discordant Cardiac Alternans
Volume 96, Issue 5, Pages (March 2009)
Teuta Pilizota, Joshua W. Shaevitz  Biophysical Journal 
Bidirectional Power Stroke by Ncd Kinesin
Irina V. Dobrovolskaia, Gaurav Arya  Biophysical Journal 
Velocity-Dependent Mechanical Unfolding of Bacteriorhodopsin Is Governed by a Dynamic Interaction Network  Christian Kappel, Helmut Grubmüller  Biophysical.
Dynamics of Active Semiflexible Polymers
An Effective Solvent Theory Connecting the Underlying Mechanisms of Osmolytes and Denaturants for Protein Stability  Apichart Linhananta, Shirin Hadizadeh,
Michael Schlierf, Felix Berkemeier, Matthias Rief  Biophysical Journal 
M. Müller, K. Katsov, M. Schick  Biophysical Journal 
Fredrik Elinder, Michael Madeja, Hugo Zeberg, Peter Århem 
Biophysical Coarse-Grained Modeling Provides Insights into Transport through the Nuclear Pore Complex  R. Moussavi-Baygi, Y. Jamali, R. Karimi, M.R.K.
Robust Driving Forces for Transmembrane Helix Packing
Elementary Functional Properties of Single HCN2 Channels
Kinetic and Thermodynamic Analysis of the Light-induced Processes in Plant and Cyanobacterial Phytochromes  Igor Chizhov, Björn Zorn, Dietmar J. Manstein,
Volume 98, Issue 1, Pages (January 2010)
Interaction of Oxazole Yellow Dyes with DNA Studied with Hybrid Optical Tweezers and Fluorescence Microscopy  C.U. Murade, V. Subramaniam, C. Otto, Martin.
Stochastic Pacing Inhibits Spatially Discordant Cardiac Alternans
Christina Ketchum, Heather Miller, Wenxia Song, Arpita Upadhyaya 
John E. Pickard, Klaus Ley  Biophysical Journal 
Felix Ruhnow, Linda Kloβ, Stefan Diez  Biophysical Journal 
Volume 107, Issue 3, Pages (August 2014)
Volume 113, Issue 10, Pages (November 2017)
Mechanical Coupling between Myosin Molecules Causes Differences between Ensemble and Single-Molecule Measurements  Sam Walcott, David M. Warshaw, Edward P.
Inherent Force-Dependent Properties of β-Cardiac Myosin Contribute to the Force- Velocity Relationship of Cardiac Muscle  Michael J. Greenberg, Henry Shuman,
Use Dependence of Heat Sensitivity of Vanilloid Receptor TRPV2
Intramolecular Proton Transfer in Channelrhodopsins
Kinetic Folding Mechanism of Erythropoietin
Hysteresis-Based Mechanism for the Directed Motility of the Ncd Motor
George D. Dickinson, Ian Parker  Biophysical Journal 
Volume 99, Issue 9, Pages (November 2010)
Roop Mallik, Dmitri Petrov, S.A. Lex, S.J. King, S.P. Gross 
Presentation transcript:

Volume 111, Issue 6, Pages 1287-1294 (September 2016) The Effect of Temperature on Microtubule-Based Transport by Cytoplasmic Dynein and Kinesin-1 Motors  Weili Hong, Anjneya Takshak, Olaolu Osunbayo, Ambarish Kunwar, Michael Vershinin  Biophysical Journal  Volume 111, Issue 6, Pages 1287-1294 (September 2016) DOI: 10.1016/j.bpj.2016.08.006 Copyright © 2016 Biophysical Society Terms and Conditions

Figure 1 Temperature impacts the velocities of kinesin and mammalian cytoplasmic dynein differently. (A) Kinesin velocity and Arrhenius fit (solid line) down to 8°C. (B) Dynein velocity and fit to a piecewise Arrhenius trend (solid line) with a crossover at ∼15°C. (C) Direct comparison of the trends in (A) (dashed gray line) and (B) (solid black line) on the logarithmic Arrhenius plot. Inset: ratio of the fit curves obtained in (A) and (B) plotted on a linear scale. (D) Yeast cytoplasmic dynein velocity and fit to a piecewise Arrhenius trend (solid line) with a crossover at ∼8°C (activation energy 50.5 kJ/mol and 151.5 kJ/mol above and below 8°C, respectively). (E) Arrhenius plot of (D). Error bars, mean ± SE. Biophysical Journal 2016 111, 1287-1294DOI: (10.1016/j.bpj.2016.08.006) Copyright © 2016 Biophysical Society Terms and Conditions

Figure 2 Temperature dependence of kinesin and mammalian cytoplasmic dynein processivity and stall force. (A and B) Kinesin processivity at 5°C (A) is 497.7 ± 0.09 nm/s, which is significantly lower than the 841.5 ± 0.2 nm/s obtained at room temperature (B). (C) Dynein processivity is 0.69 ± 0.09 μm/s at 10°C. Error bars, mean ± SE. (D and E) Force production by single kinesin (D) and mammalian cytoplasmic dynein (E) motors (kinesin: 5.3 ± 0.2 pN at 295 K vs. 5.2 ± 0.2 pN at 280.5 K; dynein: 1.2 ± 0.1 pN at 286.5 K vs. 1.2 ± 0.1 pN at 302.5 K; error bars: mean ± SE). Biophysical Journal 2016 111, 1287-1294DOI: (10.1016/j.bpj.2016.08.006) Copyright © 2016 Biophysical Society Terms and Conditions

Figure 3 Simulations of cargo transported by a team of one kinesin and four dyneins (5 pN and 1.25 pN stall force, respectively). Motors were simulated using the anisotropic force-detachment relationship (Fig. S4 and Supporting Materials and Methods). (A) Independent traces of simulated bead motion at 275 K (black) and 286 K (dark gray) are shown superimposed (100 traces for each temperature). (B and C) Probability that a simulated trace will have a positive final location (i.e., the probability of kinesin winning) for (B) baseline and (C) 10× higher dynein processivity values at high, intermediate, and low temperatures (310 K, 286 K, 275 K). (D) Transport velocity histograms illustrate that the directional preference reverses sign as a function of temperature. Note that the velocity undergoes large changes with temperature, necessitating the rescaling of the x axis. Biophysical Journal 2016 111, 1287-1294DOI: (10.1016/j.bpj.2016.08.006) Copyright © 2016 Biophysical Society Terms and Conditions

Figure 4 Simulations of cargo transported by a team of one kinesin and four dyneins (5 pN and 1.25 pN stall force, respectively). Motors were simulated using the isotropic force-detachment relationship (model B, Fig. S5). (A) Independent traces of simulated bead motion at 275 K (dark gray) and 286 K (light gray) are shown superimposed (100 traces for each temperature). (B) Probability that a simulated trace will have a positive final location (i.e., the probability of kinesin winning) for baseline (1×: solid line) and 10× (dashed line) higher dynein processivity values. (C) Transport velocity histograms reveal that the directional preference reverses sign as a function of temperature. Note that the velocity undergoes large changes with temperature, necessitating the rescaling of the x axis. (D) Model: when all motors are active at high temperatures (top), some ensembles of kinesin and dynein motors will exhibit motility with an overall bias in the minus-end direction on MTs. However, at low temperatures (bottom), dynein steps dramatically more slowly than kinesin, leading to an overall transport bias in the plus-end direction, as well as other potentially observable effects (Movies S1, S2, and S3). Biophysical Journal 2016 111, 1287-1294DOI: (10.1016/j.bpj.2016.08.006) Copyright © 2016 Biophysical Society Terms and Conditions