Population Genetics Provides Evidence for Recombination in Giardia

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Population Genetics Provides Evidence for Recombination in Giardia Margarethe A. Cooper, Rodney D. Adam, Michael Worobey, Charles R. Sterling  Current Biology  Volume 17, Issue 22, Pages 1984-1988 (November 2007) DOI: 10.1016/j.cub.2007.10.020 Copyright © 2007 Elsevier Ltd Terms and Conditions

Figure 1 SNP Diagrams for Six Genotype A2 G. lamblia Isolates Chromosome 3 open reading frames and SNPs across 6 kb. ORFs are depicted in vertical striped boxes; top boxes are forward, bottom boxes are reverse. ORF names are written above the box, and if the ORF is a hypothetical protein, its corresponding GiardiaDB ORF number is provided. JH is the reference genotype A2 isolate, and 55, 246, 303 and 305, and 335 are genotype A2 field isolates. Isolates 303 and 305 are from siblings and are identical. Hash marks along each horizontal line represent SNPs in the field isolates, compared to JH. Current Biology 2007 17, 1984-1988DOI: (10.1016/j.cub.2007.10.020) Copyright © 2007 Elsevier Ltd Terms and Conditions

Figure 2 SNP Diagrams for Six Genotype A2 G. lamblia Isolates Chromosome 5 open reading frames and SNPs across 9.5 kb. Open arrows with an asterisk depict an insertion or deletion (indel). See legend for Figure 1. Current Biology 2007 17, 1984-1988DOI: (10.1016/j.cub.2007.10.020) Copyright © 2007 Elsevier Ltd Terms and Conditions

Figure 3 Maximum-Likelihood Trees, with Bootstrap Support, of Sequences from Chromosomes 3, 4, and 5 of Giardia WB is the genotype A1 outgroup. (A) Chromosome 3 6 kb region including γ-giardin. (B) Chromosome 4 1.2 kb region including β-giardin. (C) Chromosome 5 9.6 kb region adjacent to tpi. Current Biology 2007 17, 1984-1988DOI: (10.1016/j.cub.2007.10.020) Copyright © 2007 Elsevier Ltd Terms and Conditions