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copyright cmassengale DNA Replication copyright cmassengale

copyright cmassengale Replication Facts DNA has to be copied before a cell divides DNA is copied during the S or synthesis phase of interphase New cells will need identical DNA strands copyright cmassengale

Synthesis Phase (S phase) S phase during interphase of the cell cycle Nucleus of eukaryotes Mitosis -prophase -metaphase -anaphase -telophase G1 G2 S phase interphase DNA replication takes place in the S phase. copyright cmassengale

copyright cmassengale DNA Replication Begins at Origins of Replication Two strands open forming Replication Forks (Y-shaped region) New strands grow at the forks Replication Fork Parental DNA Molecule 3’ 5’ copyright cmassengale

copyright cmassengale DNA Replication As the 2 DNA strands open at the origin, Replication Bubbles form Prokaryotes (bacteria) have a single bubble Eukaryotic chromosomes have MANY bubbles Bubbles copyright cmassengale

copyright cmassengale DNA Replication Enzyme Helicase unwinds and separates the 2 DNA strands by breaking the weak hydrogen bonds Single-Strand Binding Proteins attach and keep the 2 DNA strands separated and untwisted copyright cmassengale

copyright cmassengale DNA Replication Enzyme Topoisomerase attaches to the 2 forks of the bubble to relieve stress on the DNA molecule as it separates Enzyme DNA Enzyme copyright cmassengale

b

Priming of DNA The exposed bases have to be “primed” (prepared) to accept new nucleotides. This is done with the help of PRIMASE: short molecules called primers attach to the exposed bases and serve as a starting point for DNA synthesis.

Addition of nucleotides Once the helix is unwound and primed an enzyme called DNA POLYMERASE moves along each strand of DNA adding free-floating nucleotides to the exposed bases, according to the base-pairing rules. HOWEVER NOTHING IS AS SIMPLE AS IT SEEMS!!

Remember the numbering of the sugar molecules in DNA: One strand of nucleotides will be pointing with the 5’ end at the top while the other strand will be going in the opposite direction. P O C 2’ 1’ 3’ 4’ 5’ P C 2’ 1’ 3’ 4’ O 5’ C Nitrogen Base Nitrogen Base

Addition of nucleotides cont. DNA polymerase can only synthesize a new strand of DNA in a 5’ 3’ direction.

Synthesis of the New DNA Strands The Leading Strand is synthesized as a single strand from the point of origin toward the opening replication fork RNA Primer DNA Polymerase Nucleotides 3’ 5’ copyright cmassengale

Synthesis of the New DNA Strands The Lagging Strand is synthesized discontinuously against overall direction of replication This strand is made in MANY short segments It is replicated from the replication fork toward the origin copyright cmassengale

Lagging Strand Segments Okazaki Fragments - series of short segments on the lagging strand Must be joined together by an enzyme Lagging Strand RNA Primer DNA Polymerase 3’ 5’ Okazaki Fragment copyright cmassengale

Joining of Okazaki Fragments The enzyme Ligase joins the Okazaki fragments together to make one strand Lagging Strand Okazaki Fragment 2 DNA ligase Okazaki Fragment 1 5’ 3’ copyright cmassengale

Replication of Strands Replication Fork Point of Origin copyright cmassengale

copyright cmassengale Proofreading New DNA DNA polymerase initially makes about 1 in 10,000 base pairing errors DNA polymerase is also responsible for proofreading and correcting these mistakes The new error rate for DNA that has been proofread is 1 in 1 billion base pairing errors copyright cmassengale

Semiconservative Model of Replication Idea presented by Watson & Crick The two strands of the parental molecule separate, and each acts as a template for a new complementary strand New DNA consists of 1 PARENTAL (original) and 1 NEW strand of DNA DNA Template New DNA Parental DNA copyright cmassengale

copyright cmassengale DNA Damage & Repair Chemicals & ultraviolet radiation damage the DNA in our body cells Cells must continuously repair DAMAGED DNA Excision repair occurs when any of over 50 repair enzymes remove damaged parts of DNA DNA polymerase and DNA ligase replace and bond the new nucleotides together copyright cmassengale

copyright cmassengale Question: What would be the complementary DNA strand for the following DNA sequence? DNA 5’-CGTATG-3’ copyright cmassengale

copyright cmassengale Answer: DNA 5’-CGTATG-3’ DNA 3’-GCATAC-5’ copyright cmassengale

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