Clinical Data Analytics Workgroup

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Presentation transcript:

Clinical Data Analytics Workgroup Lisiane Pruinelli, PhD, RN, Assistant Professor, University of Minnesota, School of Nursing Bonnie L. Westra, PhD, RN, FAAN, FACMI, Associate Professor Emerita, University of Minnesota, School of Nursing, Co-Director Center for Nursing Informatics June 2019

Purpose Demonstrate the value of sharable and comparable nurse-sensitive data to support practice and translational research for transforming health care and improving patient quality and safety. 3 Subgroups Information Model Validation Population Health Informatics Data Science Data Data Science Research Risk Tools

Key Priorities Validate flowsheet information models across multiple health systems. Examine data for population health analytics that includes nursing data along with other interprofessional data to inform risk management in population health. Apply data science methods, using validated information models derived from diverse sources of healthcare data, to address nurse-sensitive research questions that have the potential to inform nursing and multidisciplinary approaches for better patient care and outcomes

Validation of Information Models Subgroup Co-leads: Kay Lytle (Duke), Bonnie Westra (UMN) Purpose Validate previously developed information models from flowsheet data to extend national standards with nurse-sensitive data from 10 organizations. Collaborate on developing a process for validation of information models with flowsheet data

Information Models Information Model Name Pain CAUTI/ GU # Flowsheet IDs Mapped to Observables # Information Model Classes/ Observables Pain 309 12 80 CAUTI/ GU 79 3 38 Fall Prevention 59* 4 57 Pressure Ulcers 104 6 56 VTE 67 8 16 Cardiovascular System 241 84 Gastrointestinal System 60 28 Musculoskeletal System 276 9 72 Respiratory System 272 61 Vital Signs/Anthropometrics 85 10 48

Accomplishments 2018-2019 Results of the pain IM were published Revised the process for validation of information models. Incrementally developed and used FloMap software for validation of the Genitourinary (GU) and Fall Prevention Models across 10 organizations. Collaborated with the Encoding and Modeling Workgroup to provide clarification and rationale for concepts and values for the Pain IM. Developed an internet-based survey methodology for obtaining broader validation of information models. Collaborated with nursing informatics groups to obtain broader validation of the GU IM. Presented information on the work of the IM Validation group on Pain Management. Submitted an abstract to present at AMIA. Two articles in process

Publications – IM Validation Lytle, K. S. (in press). Information models offer value for nursing. Nursing2019 49(7). Westra, B.L., Johnson, S. G., Ali, S., Bavuso, K.M., Cruz, C.A., Collins, S., Furukawa, M., Hook, M.L., LaFlamme, A., Lytle, K., Pruinelli, L., Rajchel, T., Settergren, T., Westman, K.F., Whittenburg, L. (2018).Validation and Refinement of a Pain Information Model from EHR Flowsheet Data, Applied Clinical Informatics, 9:185–198, doi: 10.1055/s-0038-1636508.

Presentations – IM Validation  Lytle, K. & Hook, M. (April 26, 2019). Analyzing current data to refine nursing pain documentation (session #703). American Nurses Association (ANA) Quality and Innovation Conference. Orlando, FL.  Lytle, K. & Boyd, D. (August 26, 2018). UGM134 What's in your pack? Nursing knowledge big data summit. Epic User Group Meeting (UGM). Verona, WI. Klann, J.G., Collins, S.A., Cato, K.D., Waitman, L.R., Westra, B.L. Nursing Documentation and the Clinical Research Informatics Pipeline, AMIA Joint Summit, San Francisco, CA, March 2019. Lytle, K., Westra, B. & Hook, M. (2018, November 15). Analyzing current data to refine nursing pain documentation. 2018 Nursing Research Conference – From the Clinic to the Community: The Impact of Nursing Research on Population Health. Duke University School of Nursing, Durham, NC.

Population Health Informatics Subgroup Co-leads: Alvin Jeffrey (Vanderbilt) and Sharon Hewner (University at Buffalo) The purpose of this group is to: Document the extent to which nursing data is used in population health analytics today Determine nursing care related data points that can be used to inform this process. This is informed by the larger analytic workgroup (the variables and models they are validating) Trial new analytic methods (non-hypothesis based) for using this data in combination with traditional data sources Trial population health analytic processes with new nursing care related data points. Evaluate opportunities to also include the patient voice in their own care with standardized coding

Accomplishments 2018-2019 Publication completed Jeffery, A.D., Hewner,S., Pruinelli,L., Lekan, D., Lee,M., Gao, G., Holbrook, L., Sylvia, M.(2019). Risk prediction and segmentation models used in the United States for assessing risk in whole populations: a critical literature review with implications for nurses’ role in population health management, JAMIA Open, 0(0), 1–10, doi: 10.1093/jamiaopen/ooy053. This subgroup has completed its work

Data Science Co-Leads: Steve Johnson & Lisiane Pruinelli (UMN) The purpose of this subgroup is to: Define principles of data science for personalized care using nursing-sensitive data Conduct full life-cycle data science projects to serve as exemplars for cross-organization data science Use validated reference information models to frame research questions, to guide data extraction, and support study design towards personalized care Document best practices for data science, develop educational materials for other Nursing Knowledge Big Data workgroups to use, disseminate findings and act as advisors on other projects

Accomplishments 2018-2019 Developed and conducted three “hands-on/interactive” workshops on Data Science. We presented one at the AMIA 2019 Informatics Summit (~ 120 participants), one at the 2019 Nursing Knowledge Big Data Conference in June (Pre-Conference Track 1) and we will be presenting the third at MedInfo 2019 in August . A Data Science Environment was setup for all of the workgroup members to use for learning data science techniques. The Environment was loaded with the MIMIC III EHR data and uses the Google Big Query database. The Data Science Roadmap developed by the group has been included as part of national and international presentations. 1) The Potential of Using EHR data for Big Data Science Addressing Complex Conditions – Big Ten Broadcast via WebEx (Pruinelli, April 2019). 2) Nursing in the Big Data Era, Opening Speech at the 30th Scientific Nursing Week at Hospital de Clinicas of Porto Alegre, Brazil (Pruinelli, May 2019). Grant submission (funded): Pruinelli L, Johnson S. School of Nursing Foundation Grant (Title: Improving Population Outcomes Using Data Science: A Roadmap for Nurse Leaders). 02/01/2018-01/31/2019 Data is accessed via Colaboratory and Juptyer notebooks. The environment is paid for via a grant from the University of Minnesota School of Nursing.

Publications Pruinelli, L., Jonhnson, S. G., Freismeier, B., Coviak, C., winden, T., & Delaney, C. W. An applied health care data science roadmap for nursing leaders: a workshop development, conceptualization and application. CIN. [Under Review] Johnson, S. G., Pruinelli, L., & Winden, T. (2018). Hands-on full life cycle data science workshop. https://www.youtube.com/watch?v=aiAfr1Y6Img&feature=youtu.be. https://www.youtube.com/watch?v=aiAfr1Y6Img&feature=youtu.be [Non-Refereed] Johnson, S. G., & Pruinelli, L. (2018). Hands-on full life cycle data science workshop. http://github.com/nkbds/track1 http://github.com/nkbds/track1 [Non-Refereed] – Patent & Intellectual Property Johnson & Pruinelli, 2018.  Johnson S, Winden T, Pruinelli L. Hands-On Full Life Cycle Data Science Workshop (2019). Workshop AMIA 2019 Informatics Summit, San Francisco, CA. Johnson S, Pruinelli L, et. al. (2019). Data Science Workshop (2019). Workshop 2019 Nursing Knowledge Big Data Science Conference – Pre-Conference Track 1, Minneapolis, MN. Pruinelli L, Johnson S, Winden T. Hands-On Full Life Cycle Data Science Workshop (2019). Workshop MedInfo 2019, Lyon, France.