Carbapenem-Resistant Enterobacteriaceae in the community

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Carbapenem-Resistant Enterobacteriaceae in the community Milano – 15 Marzo, 2019 (11:45 - 12:15) Sessione 7: Le Infezioni nei Pazienti Fragili Carbapenem-Resistant Enterobacteriaceae in the community La circolazione di microrganismi CRE in comunità Prof. Andrea Endimiani, MD, PhD, FAMH Institute for Infectious Diseases - University of Bern, Switzerland

Klebsiella pneumoniae Extensively drug-resistant Antibiotics tested Wildtype (WT) MDR Multidrug-resistant XDR Extensively drug-resistant PDR Pandrug-resistant Ampicillin R Amoxicillin-clav. S S/R Piperacillin-tazob. Cephalotin Cefoxitin Cefpodoxime Ceftriaxone Cefotaxime Ceftazidime Cefepime Aztreonam Imipenem Meropenem Gentamicin Tobramycin Amikacin Ciprofloxacin Doxycycline Trimethoprim/sulfa. Fosfomycin Tigecycline Colistin Beta-Lactams Penicillins Penicillins “protected” Narrow-, broad- spectrum enzymes Cephalosporins Ig IIg ESBLs AmpCs IIIg Carbapenemases IVg Monobactams Carbapenems Aminoglycosides Quinolones Tetracyclines Antifolates Miscellaneous But remember: Porins efflux pumps PBPs “LAST OPTIONS”

Narrow/Broad-spectrum Hydrolyzed 1-2GCs (cephalotin, cefpodoxime) Monobactams (aztreonam) Cefamycins (cefoxitin) 4GCs (cefepime) Carbapenems (imipenem, meropenem) 3GCs (ceftriaxone, ceftazidime) Penicillins (ampicillin) Not hydrolyzed A Narrow/Broad-spectrum (TEM-1, TEM-2, SHV-1) ESBLs (TEMs, SHVs, CTX-Ms) Carbapenemases (KPCs) B Carbapenemases, MBLs (NDMs, VIMs, IMPs) C AmpCs (both chromosomal and plasmidic) D Broad/Narrow-spectrum OXAs (OXA-1) Extended-spectrum OXAs (OXA-11, OXA-15) OXA Carbapenemases (OXA-48-like, OXA-23, OXA-24)

Main reasons for loss of porin: Ertapenem treatment S R Main reasons for loss of porin: stop codon (TAA, TAG, TGA) due to mutation(s) insertion of IS elements (gene truncated)

87% CPE - 13% non-carbapenemase producers IJAA 52: 898, 2018 334 CRE: 87% CPE - 13% non-carbapenemase producers OmpK36 OmpK35 OmpA

ECDC: 2005 versus 2017: invasive strains Carbapenem-I/R K. pneumoniae (incl. carbapenemases) EU: 2014: 7.3% - 2017: 7.2% Carbapenem I/R E. coli (incl. carbapenemases) EU: 2014: 0.1% - 2017: 0.1%

82 index patients (72 Ec; 10 Kp) 112 hospital contacts 96 household contacts Transmission rates in hospital 4.5% ESBL-E. coli (5.6/1000 exposure days) 8.3% ESBL-K. pneumoniae (13.9/1000 exposure days) 28% ST131 Transmission rates at home 23% ESBL-E. coli 25% ESBL-K. pneumoniae

Receiving healthcare in endemic areas (transfer from)

From ICU in Serbia From hospital in Libya (Polytrauma) (Polytrauma) ST101 ST198 ST101 From hospital in Egypt (2 patients) ST15 ST11

One CPE NDM-1-producing E. coli December 2012 - October 2013 170 healthy travelers negative at departure Univariate Multivariate Kuenzli E et al., BMC Infect Dis, 2014 87% [3GC-R] 0% India: N=68 One CPE NDM-1-producing E. coli Overall 0.6% CPE India 1.5% CPE

Transmission in the household? VOYAG-R: Feb 2012 – March 2013 574 French travelers of which 57 who visited India (all negative) Ruppé E et al., Eurosurv., 2014 OXA-181 ! 0.5% CPE 5.3% India Detected Not detected Not provided 1: ~50-y healthy female Traveled alone 17 days – April 2012 Backpacker tourist No exposure to HCS or ABs 2: ~30-y healthy female Traveled with another person 10 days – Nov 2012 No exposure to HCS or ABs 3: ~30-y healthy female Traveled alone 30 days – Jan 2013 Backpacker + visited relatives No exposure to HCS or ABs Digestive disorders Transmission in the household?

Van Hattem JM et al., Future Microbiol, 2016 COMBAT study Nov 2012 – Nov 2013 2001 travelers and 215 non-traveling HH Van Hattem JM et al., Future Microbiol, 2016 0.25% CPE * (n=500) All without HC exposure Possible Household Transmission Diarrhea Diarrhea Antibiotic intake Ligation-mediated PCR

CPE cases in the community (infection or colonization) Most of the CPE found in community are healthcare-associated Healthy travelers seem not significantly contributing to CPE importation Impact of non-human settings (e.g., animals) ??? Is this overall phenomenon underestimated ??? Will “community CPE” increase ???

Better epidemiological data about CPE (define CAI, COI, HAI) Not only laboratory-based studies Adequate methods to screen for CPE gut carriage We need studies focusing on: Follow-up studies on discarded CPE carriers CPE transmission in the household Gut colonization with CPE in the community (healthy people, travelers) Surveys Animals Environment Food chain Better characterization of the CPE found in the community/travelers (gut) Whole-genome sequencing Importance of plasmid characterization and “plasmid transmission”

GRAZIE! University of Bern: Institute for Infectious Diseases (IFIK) Odette J. Bernasconi (PostDoc) Mathieu Clément (PhD student) Thomas Büdel (Lab Tech) Andreas Candinas (Master student) Max Scheidegger (Master student) Centre of Competence for Military and Disaster Medicine, Swiss Armed Forces Grant No. 170063 Grant No. 177378