The Spectrum of Mitochondrial DNA Deletions is a Ubiquitous Marker of Ultraviolet Radiation Exposure in Human Skin  Amanda J. Ray, Richard Turner, Osamu.

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The Spectrum of Mitochondrial DNA Deletions is a Ubiquitous Marker of Ultraviolet Radiation Exposure in Human Skin  Amanda J. Ray, Richard Turner, Osamu Nikaido, Jonathan L. Rees, Mark A. Birch-Machin  Journal of Investigative Dermatology  Volume 115, Issue 4, Pages 674-679 (October 2000) DOI: 10.1046/j.1523-1747.2000.00092.x Copyright © 2000 The Society for Investigative Dermatology, Inc Terms and Conditions

Figure 1 Increased nuclear staining for thymine dimers in UV-irradiated HaCaT cells. Immunocytochemistry of HaCaT cells with the TDM-2 monoclonal antibody for thymine dimers: (a) nonirradiated; (b) irradiated with 529 mJ per cm2 UVR (290–400 nm). Journal of Investigative Dermatology 2000 115, 674-679DOI: (10.1046/j.1523-1747.2000.00092.x) Copyright © 2000 The Society for Investigative Dermatology, Inc Terms and Conditions

Figure 2 Increased level of thymine dimers in mtDNA purified from UV-irradiated HaCaT cells. Southwestern (a) and southern (b) analyses of mitochondrial DNA purified from HaCaT cells exposed to either 0 or 529 mJ per cm2 of UVR (290–400 nm) (– and +lanes, respectively) and probed (a) with the TDM-2 monoclonal antibody raised thymine dimers and visualized with an enhanced chemiluminescence detection system or (b) a 32P-radiolabeled 470 bp PCR product from the D loop region of the mitochondrial genome (see Materials and Methods). Journal of Investigative Dermatology 2000 115, 674-679DOI: (10.1046/j.1523-1747.2000.00092.x) Copyright © 2000 The Society for Investigative Dermatology, Inc Terms and Conditions

Figure 3 The mitochondrial origin of the long PCR products were confirmed by southern blot analysis. The spectrum of mtDNA deletions from six samples (lanes 1–3: whole skin samples; lanes 4 and 6: dermal samples; lane 5: epidermal sample) was visualized in the long PCR assay (using primers spanning the 11.1 kb mtDNA region) as a ladder of DNA products on an agarose gel (a). A southern blot of these products was probed with a 32P-radiolabeled 470 bp PCR product from the D loop region of the mitochondrial genome (b). All of the PCR products seen by ethidium bromide staining in (a) were also found to hybridize to the mtDNA probe in (b), confirming that they are derived from the mitochondrial genome. The long PCR assay was validated by the inclusion of several controls that included wild type mtDNA only (thereby amplifying either the 11.1 kb or 5.4 kb product alone) and mtDNA from a Kearns Sayre syndrome patient that harbours 75% of the common deletion (a gift from Professor D. Turnbull, University of Newcastle, U.K.) (results not shown). Journal of Investigative Dermatology 2000 115, 674-679DOI: (10.1046/j.1523-1747.2000.00092.x) Copyright © 2000 The Society for Investigative Dermatology, Inc Terms and Conditions

Figure 4 A significant increase in the number of deletions with increasing UVR exposure is observed in the epidermis but not the dermis. The number of deletions in (a) epidermal and (b) dermal samples with various levels of UVR exposure. Using the Kruskal–Wallis test, the medians were shown to vary significantly between each exposure group in the epidermis (p =0.0015) but not in the dermis (p =0.6376). Journal of Investigative Dermatology 2000 115, 674-679DOI: (10.1046/j.1523-1747.2000.00092.x) Copyright © 2000 The Society for Investigative Dermatology, Inc Terms and Conditions

Figure 5 The median age decreases significantly with increasing UVR exposure of the sample groups in the epidermis but not the dermis. The ages of each epidermal (a) and dermal (b) sample are plotted from each UVR exposure group. Using the Kruskal–Wallis test the medians were shown to vary significantly between exposure groups in the epidermis (p =0.0491) but not in the dermis (p =0.7333). Journal of Investigative Dermatology 2000 115, 674-679DOI: (10.1046/j.1523-1747.2000.00092.x) Copyright © 2000 The Society for Investigative Dermatology, Inc Terms and Conditions