Identification of an unusual translation start in the published human MKL1. Identification of an unusual translation start in the published human MKL1.

Slides:



Advertisements
Similar presentations
Essential Basic Part Types Coding Sequences (C) - Complete open reading frames (type I), or sequences encoding polypeptides but lacking either a stop codon.
Advertisements

Mutations in DNA changes in the DNA sequence that can be inherited can have negative effects (a faulty gene for a trans- membrane protein leads to cystic.
Fabien Darfeuille, Cecilia Unoson, Jörg Vogel, E. Gerhart H. Wagner 
Volume 21, Issue 2, Pages (February 2014)
Volume 150, Issue 7, Pages e5 (June 2016)
Volume 163, Issue 3, Pages (October 2015)
A: OAZ1 mRNA transcript of 775-1, and parental cell lines showing the stop codon introduced by the nonsense mutations in the and transcripts,
Quiz#4 LC710 11/14/11 name___________
MiR‐199a directly targets ERBB2 and ERBB3, whereas miR‐125b targets ERBB3. miR‐199a directly targets ERBB2 and ERBB3, whereas miR‐125b targets ERBB3. (A)
Psoriasis Upregulated Phorbolin-1 Shares Structural but not Functional Similarity to the mRNA-Editing Protein Apobec-1  Peder Madsen, Julio E. Celis,
Fig. 1. Mutations in slpA confer Av-CD291.2 resistance.
Identification, description, and expression of E7-less STING isoforms.
Fabien Darfeuille, Cecilia Unoson, Jörg Vogel, E. Gerhart H. Wagner 
A, Averaged full MS (ions converted to monoisotopic MW by Xcalibur Xtract) of Segment I-3 (see supplemental Fig. A, Averaged full MS (ions converted to.
Validation of ChIP-seq reads.
Volume 6, Issue 4, Pages (April 1996)
Schematic drawing of alternatively-spliced GFP reporter gene.
Tagging of the endogenous Py03652 gene with the gfp gene in Plasmodium yoelii. Tagging of the endogenous Py03652 gene with the gfp gene in Plasmodium yoelii.
Shifty Ciliates  Lawrence A. Klobutcher, Philip J. Farabaugh  Cell 
Evaluation of LC3 and ATG13 dynamics in AS-stimulated microglial cells using live-imaging. Evaluation of LC3 and ATG13 dynamics in AS-stimulated microglial.
The C-terminal peptide of p90rsk can disrupt the interaction of p42/p44 MAPKs with their nuclear phosphatases, thus preventing nuclear p42/p44 MAPKs inactivation.
A highly conserved six-amino-acid region in the C-terminal CT domain of MARCH8 is responsible for its ability to downregulate TfR. A highly conserved six-amino-acid.
The C-terminal membrane-proximal region of MARCH8 interacts with TfR.
The effects of a dominant negative mutant of lamin B1 on lamin distribution in HeLa cells. The effects of a dominant negative mutant of lamin B1 on lamin.
PARP cleavage is detected in TA cells, but not in KSC
Abraxas binds to BRCT–PALB2(L21P) and is involved in the recruitment of this fusion protein or of endogenous PALB2 to sites of DNA damage. Abraxas binds.
Mutation in pycr1a exon 3 disrupts predicted exonic splicing enhancers
PfSec13 is a structural homolog of ScSec13·Nup145C.
Fusion of PALB2 to the BRCT repeats of BRCA1 mediates the assembly of DNA damage foci by PALB2 and RAD51 in BRCA1-deficient cells. Fusion of PALB2 to the.
Fig. 1. Fusion protein amino acid sequences. Chick CaV2
Transcription factor network of human pancreas development.
Fig. 7. Representative images of control (Cas9+GFP) and Cas9+gRNA+GFP co-injected embryos on day 4 of culture, showing nuclear-imported GFP (green) and.
Volume 10, Issue 6, Pages (June 1999)
Mosquito GluCl alignment and anti-AgGluCl IgG specificity.
Computational analysis of the Msi1 3′UTR sequence and identification of the associated RBP activities. Computational analysis of the Msi1 3′UTR sequence.
Overview of HEAT-motif-containing proteins.
Reconstitution of GBF1 recruitment to Golgi membranes in a cell-free assay. Reconstitution of GBF1 recruitment to Golgi membranes in a cell-free assay.
Example of a putative bridging fiber.
Ezrin in its open, activated conformation binds and colocalizes with MISP at the cell cortex. Ezrin in its open, activated conformation binds and colocalizes.
Nucleotide alignment of 3′ untranslated region (UTR) for four crustacean Rheb genes. Nucleotide alignment of 3′ untranslated region (UTR) for four crustacean.
Identification of a functional domain in MKL1_S that allows specific transcriptional activity. Identification of a functional domain in MKL1_S that allows.
Fig. 6. F1 trβ mutants accomplish natural metamorphosis.
Specific upregulation of MKL1_S during the initial phase of TGF-β-induced myofibroblast differentiation. Specific upregulation of MKL1_S during the initial.
MMP16 upregulation during myofibroblast differentiation
Effects of Chd1-knockdown on Hmgpi and Klf5 expression
Full-length TAPL interacts specifically with LAMP-1 and LAMP-2.
Model for TGF-β-induced myofibroblast differentiation involving MKL1 isoform-specific activities. Model for TGF-β-induced myofibroblast differentiation.
Chd1 expression and CHD1 localization during mouse preimplantation development. Chd1 expression and CHD1 localization during mouse preimplantation development.
The expression of two forms of N-cadherin.
Effect of the siRNA-mediated knockdown of endogenous MARCH8 on the expression levels of MARCH8 substrates, TfR and CD98, in HepG2 cells. Effect of the.
Multiplexed Mutagenesis Using the Csy4 System in Tomato Protoplasts.
Fig. 3. Fusion proteins subdividing the chick CaV2
Fig. 3. Mean force and velocity during jumping
Segments R1, R3, R6 and R7, and GTPase activity of Mfn2ΔTM are necessary for mitochondrial fragmentation in COS7 cells. Segments R1, R3, R6 and R7, and.
Integrins modulate the Notch pathway by regulating its intracellular trafficking and/or processing. Integrins modulate the Notch pathway by regulating.
WT MARCH8, but not the CS mutant, specifically ubiquitinates and downregulates TfR. WT MARCH8, but not the CS mutant, specifically ubiquitinates and downregulates.
Conservation of key sequence features and endocytic localisation in TbCALM. Conservation of key sequence features and endocytic localisation in TbCALM.
Membrane integration of the model constructs depends on protein sequence, not codon usage. Membrane integration of the model constructs depends on protein.
Vps36 interacts with Smo in the absence of Hh
Ubiquitin mediates the interaction between Smo and Vps36.
Structural insights based on chimeric Alp4-GCP2 analysis.
Example of swimming trajectories from three groups of fish from three different weeks along with the extracted behavioral parameters. Example of swimming.
Vps36 regulates the accumulation of Smo and Hh signaling activity.
ASPP2 hydroxylation is detectable in vivo and the amount of hydroxylation depends on FIH-1 abundance. ASPP2 hydroxylation is detectable in vivo and the.
Effect of overexpression of Gcs1p on mitochondrial morphology.
Ctip2 directly regulates Notch1 expression in differentiated cells.
Evidence for Insertional RNA Editing in Humans
Maps of Structures of the Ruby Locus in the Different Citrus Species, Orange Accessions, and Hybrids.Thick green arrows, retrotransposon LTRs; thick gray.
A, Schematic diagram of identified splice variants of PD-L1.
Identification of the translation products of the XAGE-1 variants.
Presentation transcript:

Identification of an unusual translation start in the published human MKL1. Identification of an unusual translation start in the published human MKL1. (A) ATG-ΔC and 5′UTR-ΔC constructs were overexpressed in HEK293 cells, and MKL1 was detected by immunoblotting with anti-MKL1 total mAb. (B) Human 5′UTR-full-length MKL1 was overexpressed in HEK293 cells, the translated MKL1 was affinity purified, and the major product digested with AspN. Peptides were identified by LC-MS. Highlighted in gray, peptide coverage; black star, in-frame stop codon; green letters, suggested ATG, CTG or GTG translation initiation codons (coding for M, L and V, respectively); vertical arrow, putative GTG/Val-100 start. (C) Alignment of the human MKL1 5′UTR region with those of mouse (variant 2) and Xenopus. Horizontal arrows: 5′ to 3′ direction; black star, in-frame stop codon; vertical arrow, suggested GTG/Val-100 start; blue 4-point star, nucleotides complying with the Kozak consensus sequence. (D) Point mutations targeting the suggested GTG/Val-100 start codon were introduced into the construct shown in A, the resulting constructs were transiently overexpressed in HEK293 cells and MKL1 was detected by immunoblotting with anti-MKL1 total mAb. Endogenous human MKL1 was purified from untransfected (Untransf.) HEK293 cells as described in B. Matthias A. Scharenberg et al. J Cell Sci 2014;127:1079-1091 © 2014. Published by The Company of Biologists Ltd