The TSDR of ATL cells exhibits Treg-like hypomethylated status or CD4+ conventional T cell–like methylated status. The TSDR of ATL cells exhibits Treg-like.

Slides:



Advertisements
Similar presentations
Comment on “Chromosomal Instability and Tumors Promoted by DNA Hypomethylation” and “Induction of Tumors in Mice by Genomic Hypomethylation” by Allen S.
Advertisements

Primers to map bsd deletion points on genomic DNA NameForwardReverse Amplicon size (base pairs) A15’-CCACGGATGGAGTGAGTTCT-3’5’-GCCCCCAAGATGAGGATTAT-3’931.
PIK3CA gene amplification in glioblastoma and squamous cell carcinoma (SCC) of the lung. PIK3CA gene amplification in glioblastoma and squamous cell carcinoma.
From: Epigenetic instability of imprinted genes in human cancers
BCR–ABL1 B-ALLs feature DNA methylation and expression signatures centered aroundIL2RA(CD25). BCR–ABL1 B-ALLs feature DNA methylation and expression signatures.
Diminished suppressive potency of primary Treg clones from IPEXA384T patients. Diminished suppressive potency of primary Treg clones from IPEXA384T patients.
Anti–4-1BB/PD-1 combination enriched CD8+ T cells in TILs
Antigen-specific TCRβ clonotypes map to the TCRβ repertoire at markedly different frequencies. Antigen-specific TCRβ clonotypes map to the TCRβ repertoire.
Loss of imprinting at the 14q32 domain is associated with microRNA overexpression in acute promyelocytic leukemia by Floriana Manodoro, Jacek Marzec, Tracy.
H31m1-PDL1 cells form progressively growing tumors in WT mice.
Depletion of T cells, in particular CD8+ T cells, significantly abrogates HEV neogenesis in tumors. Depletion of T cells, in particular CD8+ T cells, significantly.
Supplementary Figure 3. Bisulfite sequencing of FLJ21062 and ONECUT2 CpG islands. The relative positions of the forward (left-most) and reverse (right-most)
ZEB1‐dependent epigenetic modifications ASchemes for the genomic loci of the miRNA and E‐cadherin genes, showing regions of the CpG islands (yellow), of.
The absence of ADCC by nivolumab in vitro.
IL32 prompts cell activation and cancer-related pathways.
Supplementary Figure S1
Oligodeoxynucleotides stabilize Helios-expressing Foxp3+ human T regulatory cells during in vitro expansion by Yong Chan Kim, Ravikiran Bhairavabhotla,
Tetramer staining performed to determine frequencies of epitope-specific T cells after clearance of HPV16 infection but prior to isolation of T-cell clones.
FOXP3+CD25− Tumor Cells with Regulatory Function in Sézary Syndrome
The human GPR109A promoter is methylated and GPR109A expression is silenced in human colon carcinoma cells. The human GPR109A promoter is methylated and.
Differential expression of TRM markers by donor- and recipient-derived T cells with time. Differential expression of TRM markers by donor- and recipient-derived.
Blood Tfr cells show expression of follicular and regulatory markers.
PD-1 blockade enhances T-cell function.
Epigenome-wide differential methylation in RUL macrophages.
Functional analysis of CAR-redirected primary NK cells.
Recognition of naturally processed HTLV-1 Tax protein derived from HAM patient's PBMC. A, HTLV-1 Tax protein content was evaluated by Western blot analysis.
BRCA1 promoter methylation detected in the peripheral blood and corresponding tumor. BRCA1 promoter methylation detected in the peripheral blood and corresponding.
Methylation status of IGFBPL1 in human breast cancer.
Combined BRAFi and anti-CTLA4 administration leads to prolonged antitumor immunity in a patient with metastatic melanoma. Combined BRAFi and anti-CTLA4.
KIR-CARs/Dap12 trigger robust antigen-specific cytotoxicity in vitro.
Influence of RdDM on DCL4 Transcript Isoform Expression.
C-MYC controls expression of ABC drug transporters in CD34+ hematopoietic progenitors. c-MYC controls expression of ABC drug transporters in CD34+ hematopoietic.
DNA hypermethylation silences TRAIL in transformed cells.
Conversion of CD11bhighCD27high NK cells into MDSCs leads to CD11bhighCD27high and CD11bhighCD27low NK cell reduction. Conversion of CD11bhighCD27high.
A, high-resolution methylation analysis of ZNF545 promoter by BGS in representative carcinoma cell lines. A, high-resolution methylation analysis of ZNF545.
JAK2V617F leads to increased 5-hmC and genome-wide loss of cytosine methylation in primary patient samples. JAK2V617F leads to increased 5-hmC and genome-wide.
The ITGAL promoter is methylated in fibroblasts but not T cells
Experimental metastasis inhibition by primary tumors is mediated by NK cells and IFNγ. Experimental metastasis inhibition by primary tumors is mediated.
Increase in proliferation and activation of immune cells in peripheral blood after NKTR-214 treatment. Increase in proliferation and activation of immune.
Canonical but not adaptive NK-cell function is suppressed by Tregs.
Comparison of the frequency of nucleotide variation in the mtDNA D-loop region between stomach and other tumor cell lines. Comparison of the frequency.
Dysregulated NF-κB activation in Il1r8+/+/lpr and Il1r8−/−/lpr mice.
DNA demethylation reactivates GSN expression in gastric cancer cells.
Number of identical D-loop DNA clones detected in 10 DNA clones derived from liver tumor tissues. Number of identical D-loop DNA clones detected in 10.
Characterization of DNA-PK and PARP-1 levels and activities in the cell lines studied. Characterization of DNA-PK and PARP-1 levels and activities in the.
Patient Tregs express normal levels of suppression.
DAC treatment alters immune cell composition and enhances cytokine production in the peritoneal lavage. DAC treatment alters immune cell composition and.
PD-1 and CD103 are coexpressed on CD8+ T cells but demonstrate distinct mechanisms of regulation. PD-1 and CD103 are coexpressed on CD8+ T cells but demonstrate.
qPCR system for the FOXP3 TSDR to detect Treg.
CPI-444 enhances T-cell activation in MC38 tumors.
Monocytes from melanoma patients are unresponsive to TLR3 agonists.
A summary of the average level of methylation of selected MCA/RDA MICPs by bisulfite-modified genomic sequencing. A summary of the average level of methylation.
A, Epigenetic validation results of CBFA2T3 and GABBR2, which were first screened by MSCC sequencing and further confirmed by a Sequenom EpiTYPER assay.
CpG oligodeoxynucleotide (CpG ODN)–induced activation of different types of primary malignant B cells. CpG oligodeoxynucleotide (CpG ODN)–induced activation.
Methylation targets of TET1 in vitro.
IL35 regulation of tumor growth is accompanied by suppression of CD4+ effector T-cell activity and expansion of Tregs. IL35 regulation of tumor growth.
Correlations between APOBEC expression and immune cell markers across 22 cancer types. Correlations between APOBEC expression and immune cell markers across.
Frequency and number of KLL-specific clonotypes in tumors from patients with KLL-specific T cells in PBMCs or cultured TILs. A wedge (the length of which.
MPD-L1–transfected 300 cells do not bind to mB7-1–transfected 300 cells. mPD-L1–transfected 300 cells do not bind to mB7-1–transfected 300 cells. Cell-to-cell.
Frequency of CD4+CD25+FoxP3+ and CD4+CD25+CD127low T cells in unactivated PBMCs from healthy donors. Frequency of CD4+CD25+FoxP3+ and CD4+CD25+CD127low.
Cell counts of immune infiltrate and expression of galectin-1 and galectin-3 in the short-, medium-, and long-term survival cohorts. Cell counts of immune.
Phenotypic diversity of less predominant B-lineage clones.
Driver pathways and key genes in OSCC
MDSC population in patient peripheral blood.
Comparison of MLTC responses to tumor/peptide stimuli at day 18 and day 34 of growth. Comparison of MLTC responses to tumor/peptide stimuli at day 18 and.
Technology schematic for phenotypic tracking of single molecularly defined B-lineage clones. Technology schematic for phenotypic tracking of single molecularly.
Bezafibrate increases the number of effector CTLs by enhancing their survival capacity and proliferation. Bezafibrate increases the number of effector.
Genome-wide DNA hypomethylation associated with DNMT3A mutation in murine and human FLT3ITD AML. Human: A–C, volcano plot (A) representation of mean methylation.
Cxxc1-deficient TH17 cells exhibit a Treg cell–like expression profile
Trametinib and combination decrease T-lymphocyte proliferation.
Presentation transcript:

The TSDR of ATL cells exhibits Treg-like hypomethylated status or CD4+ conventional T cell–like methylated status. The TSDR of ATL cells exhibits Treg-like hypomethylated status or CD4+ conventional T cell–like methylated status. Bisulfite sequencing was performed using genomic DNA from each sample. The frequency of the demethylation of CpG is shown. Yellow, hypomethylated; and blue, methylated in each CpG. A, the DNA methylation status in the TSDR of the HTLV-1–infected cell lines and primary ATL cells was analyzed, and all TSDR, from amplicons (amp) 1 to 11, are illustrated. MJ cell line was used as the TSDR-hypomethylated representative, and MT-1 cell line was used as the TSDR-methylated representative. For primary ATL cells, case 2 was used as the TSDR-hypomethylated representative, and case 17 was used as the TSDR-methylated representative. B, the DNA methylation status of the TSDR of a healthy donor and primary ATL cells. Tregs from a healthy donor were used as the TSDR-hypomethylated control, and CD4+CD25− conventional T cells from a healthy donor were used as the TSDR-methylated control. The number of primary ATL cells corresponds to each case number shown in Supplementary Table S1. The data shown are the sum of three independent experiments. Yayoi Shimazu et al. Cancer Immunol Res 2016;4:136-145 ©2016 by American Association for Cancer Research