STFC case study: PhD research graph

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Presentation transcript:

STFC case study: PhD research graph Vasily Bunakov (STFC UKRI, FREYA project) RDA UK and FREYA workshop, July 2019

Science and Technology Facilities Council and its research facilities STFC funds and operates large scale instruments for the UK and visitor researchers in: - physics, astronomy - chemistry, materials - biology, medicine STFC research facilities: ISIS neutron and muon source www.isis.stfc.ac.uk Central Laser Facility www.clf.stfc.ac.uk Diamond Light Source (co-owned by STFC and Wellcome Trust) www.diamond.ac.uk

How we develop pilots in FREYA: with user stories

PhD research use case as an illustration of case-driven approach in general Collaboration: British Library and STFC are the FREYA partners and operate repositories that can be used for data integration Validation of new PID services and recommendations – for Organizations and Instruments – and supplying feedback for their improvement Demonstration of PID graph value in a disciplinary context Integration of a disciplinary graph in a common PID graph (federation of services) via reasonable interfaces For the British Library this is important because there are plans to enhance the metadata held in EThOS with more PIDs and richer information. EThOS will be moved to a new platform in the next couple of years and will be able to support more complex, rich metadata including relations such as multiple supervisor information.

Data sources to integrate EThOS (British Library) ePubs (STFC) Diamond DB Researchfish Oxford RA Organizations Experiments DataCite GRID.AC Spiral (Imperial College) ChemSpider (Royal Society of Chemistry)

Enrichment and cross-repository harmonization of records as an incentive for building a knowledge graph with as much use of PIDs as possible MATCH (ethos:EThOS_Thesis)-[r:sameThesisAs]-(x) WHERE ethos.Funders IS NULL RETURN count(ethos) WHERE ethos.Funders IS NOT NULL 454 150 Cases where STFC sponsored a PhD research (via monetary funding or via facilities’ grants-in-kind) but EThOS “Funders” is empty Where STFC is mentioned as a funder, another issue is observed: EThOS “Funders” is currently a free-text, so STFC can be referred to as: “Science and Technology Facilities Council (STFC)” “Science and Technology Facilities Council” “Science & Technology Facilities Council” “Science and Technology Facilities Council (Great Britain) (STFC)” “STFC”

Imperial College PhDs who experimented on STFC facilities

Another graph example (with connections to EThOS and ChemSpider)

Next step in data integration: extension of the PhD research graph with chemical information Match more ChemSpider records with EThOS records, to build a bigger “seed” PhD research graph Align this effort with the forthcoming upgrade of the EThOS IT infrastructure Devise a new workflow for chemical information recording by PhDs in a few good UK universities Sounds like a dedicated project that a UK funder could be interested in

Next step in service development: inclusion of the PhD research graph in a federation or services with a common GraphQL API See Martin Fenner’s blogpost: https://doi.org/10.5438/bv9z-dc66 See also Jupyter notebooks: https://github.com/datacite/notebooks See also the section of PID Forum devoted to PID graphs: https://www.pidforum.org/c/pid-graph

PID graph as a (new kind of) infrastructure for Open Science Possible data sources Possible uses Gap analysis for repositories coverage STFC ePubs Diamond publications DB Records connection across repositories CCDC data Records enrichment EMBL-EBI data Entities disambiguation ChemSpider data Impact studies

Use case connections to the RDA groups RDA Persistent Identification of Instruments WG (results adoption phase) Open Science Graphs for FAIR Data IG (community review and then the actual works of the group) Research data needs of the Photon and Neutron Science community IG (intermittent activity)

UK dimension: RDA works in the national context Champion certain RDA outcomes and RDA ongoing effort in our organizations and disciplinary communities Offer RDA UK as a platform for networking with the EU and other international projects and initiatives Educate UK policy makers, and support continuous engagement with them Use RDA UK as a launchpad for the UK-funded projects

PID Forum: www.pidforum.org Thank you! Web: www.project-freya.eu Email: info@project-freya.eu Twitter: @freya_eu PID Forum: www.pidforum.org The FREYA project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 777523