Iodide uptake by forest soils is principally related to the activity of extracellular oxidases  Chris M. Yeager 8/19/2109.

Slides:



Advertisements
Similar presentations
Soil Organic Matter Section C Soil Fertility and Plant Nutrition.
Advertisements

Control of Microbial Growth. A few terms Bacteriostatic: inhibits bacterial growth Bactericidal: something capable of killing bacteria Antiseptic: an.
The nitrogen cycle. Animals can not fix N2. They get their nitrogen by eating plants or by eating something that eats plants. Nitrogen Fixation is very.
Lec 12: Rapid Bioassessment Protocols (RBP’s)
Microbial Metabolism. What is metabolism? Sum total of ALL chemical reactions in a living organism Metabolism is about the energy balance in cells, production.
Fertilizer-induced changes in soil nutrient supply, carbon storage and nutrient cycling in immature pine and spruce forests Melanie Jones 2, Shannon Berch.
Estimating forest structure in wetlands using multitemporal SAR by Philip A. Townsend Neal Simpson ES 5053 Final Project.
Dynamics of the Northern Hardwood Ecosystem Yuqiong Hu, Jeff Plakke, Sharon Shattuck, Erin Wiley.
Drmsaiem IMMUNOGLOBULINS DR. Mohammed Saiemaldahr FACULTY OF APPLIED MEDICAL SCIENCES KAAU.
Soil Testing Procedures for Biologically Based Systems Raymond C. Ward Ward Laboratories, Inc Kearney, Nebraska
Anyone who did not attend Lecture I, see me after class for materials and course basics.
Background  The soft shell clam, Mya arenaria, currently occupies a large geographical range in the northern hemisphere.  Soft shell clams are found.
Chapter 22 Lecture Outline
WP O6 - Carbon turnover at different depths Objectives –To determine impact of recolonizing vegetation on soluble organic forms of C and N and emissions.
MEASURES of CORRELATION. CORRELATION basically the test of measurement. Means that two variables tend to vary together The presence of one indicates the.
Improving NADPH availability for natural product biosynthesis in Escherichia coli by metabolic engineering 汇报人:刘巧洁.
How do forest ecosystems respond to environmental change?
THE ROLE OF ORGANIC MATTER CONTENT OF SOILS IN THE ACCUMULATION OF POLLUTION IN A FOREST ECOSYSTEM Edit Hoyk Kecskemét College, Institute of Environment.
Oak Hickory on Coarse Textured Kamic Soils Stinchfield Woods, MI Jennifer Austin Joshua Berk Knox Erin Uloth Jennifer Dowdell Presentation for Soil Properties.
Daniel P. Bradley February 19 th, 2011 Winter Ecology Mountain Research Station, University of Colorado, Boulder EBIO 4100, Sec 570.
_____________________________________________________________________________________________________________________________________________ Fig. 02:
Effects of Acid Mine Drainage (AMD) on Nesting Tree Swallows.
There is little literature available on subsoil microbial communities because these areas were believed to be mainly devoid of life. Despite this dearth.
The patterns and consequences of post-fire successional trajectories in Alaska’s boreal forest The “Generators” - Fire severity - Abiotic and biotic site.
N cycling in the world’s oceans
COSMOS Global Change Biology 1 July  Biodiversity What is it? How is it changing over time?  Ecosystem Functioning What is it? How is it related.
What are they doing in there? A closer look at microbes in the soil in varying topography & cropping systems By Sara L. Scheiding, Sarah K. Hargreaves,
Introduction to Soils Chapter 1. Air quality.
R max and K m (26.4) Constants from Michaelis-Menten equation give insight into qualitative and quantitative aspects of enzyme kinetics Constants – Indicate.
Above and Below ground decomposition of leaf litter Sukhpreet Sandhu.
Insert name of presentation on Master Slide Annual Quality Framework Quality & Safety improvement Reporting.
Detecting & Monitoring Pollution Why is it necessary to detect and monitor pollution? What are the impacts of pollution? How can pollution be detected.
MIC 203: ENVIRONMENTAL MICROBIOLOGY Quantitative Ecology: Numbers, Biomass and activities Course Teacher: Fazle Rabbi, Lecturer Microbiology program, MNS.
Metabolism - Chapter 5 5 tasks: 1.Bringing nutrients into the cell 2.Breakdown nutrients into useable forms - catabolism 3.Make the building blocks the.
Data, Tables & Graphs October 24, 2016 BIOL 260
Biochemical tests of Gram positive bacteria
Inference for Regression
Present By Subhrangsu Sekhar Dey AMITY UNIVERSITY
Chapter 20 – Organic Pollutants
We generally think of soil from the ground up
Carbon accumulation potential in WA soils
MODULE 2 Myers’ Exploring Psychology 5th Ed.
Biologic Monitoring A. H. Mehrparvar, MD
Source Apportionment of Water Soluble Elements, EC/OC, and BrC by PMF
6 C H A P T E R Market Potential and Sales Forecasting
Dissolved Oxygen Maslyn, AP Biology.
Enzymes Regulatory enzymes are usually the enzymes that are the rate-limiting, or committed step, in a pathway, meaning that after this step a particular.
EXTRACTION OF FUCOIDAN AND TYROSINASE INHIBITORS FROM BROWN SEAWEED EXTRACTS Work carried out for Gráinne Na Mara as part of Innovation Voucher Number.
Cholesterol Synthesis, Transport, & Excretion
Enzyme Activity in the Hyporheic Region of Piedmont Streams
Regression Computer Print Out
Do reactive oxygen species play a role in myeloid leukemias?
Experiment Questions General Expts.
Topic 7.6 – HL Level Enzymes HL.
Statistical Analysis Error Bars
A group of organisms that can interbreed and produce fertile offspring
Enzymes (Page 579) Enzymes are Biological Catalysts
Alternative Accountability CCSSO NCSA June 2016
1.8 Critical Analysis: Outliers
Human spermicidal activity of inorganic and organic oxidants
Introduction to antibacterial drugs
Principles of Antimicrobial Therapy
Chap 9. Active-Site-Directed and Enzyme-Activated Irreversible Inhibitors: “Affinity Labels” and “Suicide Inhibitors” Covalent modification of enzyme may.
A Virtual Experiment Nasita Islam
Docking Simulation: A Virtual Experiment.
Carbon: Transformations in Matter and Energy
CE 370 Biological Processes
Ecology Part I.
Principles of Antimicrobial Therapy
Marina Papaiakovou, D. Timothy J
Presentation transcript:

Iodide uptake by forest soils is principally related to the activity of extracellular oxidases  Chris M. Yeager 8/19/2109

Iodine – why do we care?

Iodine biogeochemistry Biotic processes are a principal driver of iodine cycling Microorganisms transform the oxidation state of iodine, principally oxidizing iodide (I-) under aerobic conditions and reducing iodate (IO3-) under anaerobic conditions Microbes are also capable of accumulating iodine and volatilizing it via formation of small organic-I molecules

I- oxidation in soils Biotic processes are thought to be a primary driver of iodination of soil organic matter under aerobic conditions Oxidation of I- results in the formation of reactive species, I2 and HOI, that will form covalent attachments to soil organic matter The organisms and mechanisms involved in I- oxidation in soils are poorly defined Examined I- uptake by soils collected at two depths (0 -10 and 10 - 20 cm) from 5 co-located deciduous and coniferous forests in Japan and United States. Measured a variety of soil parameters and soil enzyme activities to correlate with 125I uptake. Evaluated 125I uptake in the presence of biocides and enzyme inhibitors PRIMARY GOAL: Determine the best measure(s) of the iodide oxidation potential of soils, with a focus on microbial processes

Inhibitor studies: 125I- has biological underpinnings Autoclaving, >93% inhibition The bactericide, Bronopol, average 61% inhibition (range 7 - 89%) The antifungal agent, Cycloheximide, caused inhibition of 125I uptake in only two samples The oxidase inhibitor, sodium azide, average inhibition of 81% (range 55 - 99%)

125I uptake corelates with extracellular oxidase activity Levels of 125I uptake did vary by site; highest in forest soils from the Nishi-Tokyo forested site 125I uptake was not correlated with forest type (deciduous vs. coniferous) or soil depth ABTS and L-DOPA measures of extracellular oxidases generally tracked the 125I results As with 125I uptake, measures of extracellular oxidase activity did not correlate with either soil depth or forest type Peroxidase activity was quite variable and below the level of detection for many soil samples

Best predictors of iodide oxidation in soils Multivariate analysis revealed measurements of L-DOPA oxidation and Actinobacteria biomass accounted for 75% of the variation in 125I uptake in forest soils from two continents These results indicate that extracellular oxidases drive 125I oxidation and soil binding under aerobic conditions in forest soils and that enzymes from the Actinobacteria may play a particularly important role. Aromatic soil residues with N moieties may be preferentially targeted.