Liquid Crystal Formation in Supercoiled DNA Solutions

Slides:



Advertisements
Similar presentations
Multinuclear NMR investigation of the Interaction of DNA Liquid Crystals with Divalent Metal Ions Andrea Catte a,b, Flaminia Cesare Marincola a, Mariano.
Advertisements

Willem K. Kegel, Paul van der Schoot  Biophysical Journal 
Kelly Gallagher, Kim Sharp  Biophysical Journal 
Temperature Control Methods in a Laser Tweezers System
Thomas J. English, Daniel A. Hammer  Biophysical Journal 
Thomas G. Anderson, Harden M. McConnell  Biophysical Journal 
Role of ATP-Hydrolysis in the Dynamics of a Single Actin Filament
Volume 96, Issue 10, Pages (May 2009)
Precipitation of DNA by Polyamines: A Polyelectrolyte Behavior
Volume 96, Issue 12, Pages (June 2009)
Diffusion in a Fluid Membrane with a Flexible Cortical Cytoskeleton
Volume 112, Issue 5, Pages (March 2017)
Volume 103, Issue 9, Pages (November 2012)
John P. Hale, C. Peter Winlove, Peter G. Petrov  Biophysical Journal 
Refolding of a High Molecular Weight Protein: Salt Effect on Collapse
Avanish S. Parmar, Martin Muschol  Biophysical Journal 
Volume 91, Issue 12, Pages (December 2006)
Physical Properties of Escherichia coli Spheroplast Membranes
Composition Fluctuations in Lipid Bilayers
Nanoscale Measurement of the Dielectric Constant of Supported Lipid Bilayers in Aqueous Solutions with Electrostatic Force Microscopy  G. Gramse, A. Dols-Perez,
Phase Transitions in Biological Systems with Many Components
Michael Farnum, Charles Zukoski  Biophysical Journal 
Volume 103, Issue 12, Pages (December 2012)
He Meng, Johan Bosman, Thijn van der Heijden, John van Noort 
Christa Trandum, Peter Westh, Kent Jørgensen, Ole G. Mouritsen 
J. Leng, S.U. Egelhaaf, M.E. Cates  Biophysical Journal 
Christopher B. Stanley, Tatiana Perevozchikova, Valerie Berthelier 
Volume 86, Issue 4, Pages (April 2004)
Nucleic Acid Helix Stability: Effects of Salt Concentration, Cation Valence and Size, and Chain Length  Zhi-Jie Tan, Shi-Jie Chen  Biophysical Journal 
Tracking Phospholipid Populations in Polymorphism by Sideband Analyses of 31P Magic Angle Spinning NMR  Liam Moran, Nathan Janes  Biophysical Journal 
Avanish S. Parmar, Martin Muschol  Biophysical Journal 
Static Light Scattering From Concentrated Protein Solutions II: Experimental Test of Theory for Protein Mixtures and Weakly Self-Associating Proteins 
Volume 108, Issue 6, Pages (March 2015)
Volume 86, Issue 4, Pages (April 2004)
Ion Specificity and Nonmonotonic Protein Solubility from Salt Entropy
Bruno Demé, Monique Dubois, Thomas Zemb  Biophysical Journal 
Factor Xa Binding to Phosphatidylserine-Containing Membranes Produces an Inactive Membrane-Bound Dimer  Tilen Koklic, Rinku Majumder, Gabriel E. Weinreb,
Volume 90, Issue 3, Pages (February 2006)
Taeyoon Kim, Margaret L. Gardel, Ed Munro  Biophysical Journal 
Ivan V. Polozov, Klaus Gawrisch  Biophysical Journal 
Role of Cholesterol in the Formation and Nature of Lipid Rafts in Planar and Spherical Model Membranes  Jonathan M. Crane, Lukas K. Tamm  Biophysical.
Volume 99, Issue 9, Pages (November 2010)
Volume 99, Issue 2, Pages (July 2010)
Volume 112, Issue 1, Pages (January 2017)
Volume 103, Issue 2, Pages (July 2012)
Volume 93, Issue 12, Pages (December 2007)
Abhishek Mandal, Patrick C.A. van der Wel  Biophysical Journal 
Volume 86, Issue 4, Pages (April 2004)
Thermodynamic Characterization of the Unfolding of the Prion Protein
The Denaturation Transition of DNA in Mixed Solvents
Alessandro Paciaroni, Stefania Cinelli, Giuseppe Onori 
Volume 83, Issue 3, Pages (September 2002)
M. Boström, D.R.M. Williams, B.W. Ninham  Biophysical Journal 
Volume 83, Issue 6, Pages (December 2002)
Volume 94, Issue 11, Pages (June 2008)
Miscibility Critical Pressures in Monolayers of Ternary Lipid Mixtures
Volume 80, Issue 5, Pages (May 2001)
Volume 91, Issue 4, Pages (August 2006)
Interaction of Oxazole Yellow Dyes with DNA Studied with Hybrid Optical Tweezers and Fluorescence Microscopy  C.U. Murade, V. Subramaniam, C. Otto, Martin.
Nanoscale Measurement of the Dielectric Constant of Supported Lipid Bilayers in Aqueous Solutions with Electrostatic Force Microscopy  G. Gramse, A. Dols-Perez,
Main Phase Transitions in Supported Lipid Single-Bilayer
Phase Equilibria in DOPC/DPPC-d62/Cholesterol Mixtures
Frequency-Dependent Shear Impedance of the Tectorial Membrane
Effects of Dextran Molecular Weight on Red Blood Cell Aggregation
Volume 76, Issue 5, Pages (May 1999)
Volume 94, Issue 11, Pages (June 2008)
Dimensions of Plectonemically Supercoiled DNA
Domain Growth, Shapes, and Topology in Cationic Lipid Bilayers on Mica by Fluorescence and Atomic Force Microscopy  Ariane E. McKiernan, Timothy V. Ratto,
Preferential Hydration of DNA: The Magnitude and Distance Dependence of Alcohol and Polyol Interactions  Christopher Stanley, Donald C. Rau  Biophysical.
Mojca Pavlin, Damijan Miklavčič  Biophysical Journal 
Presentation transcript:

Liquid Crystal Formation in Supercoiled DNA Solutions Svetlana S. Zakharova, Wim Jesse, Claude Backendorf, Johan R.C. van der Maarel  Biophysical Journal  Volume 83, Issue 2, Pages 1119-1129 (August 2002) DOI: 10.1016/S0006-3495(02)75235-1 Copyright © 2002 The Biophysical Society Terms and Conditions

Figure 1 Normalized 31P NMR spectra of supercoiled pUC18 DNA solutions (T=298 K). All spectra were acquired with a bandwidth of 5kHz. The average DNA concentration is from bottom to top: 3.8, 4.8, 6.0, 7.7, 14, and 30g of DNA/dm3. Biophysical Journal 2002 83, 1119-1129DOI: (10.1016/S0006-3495(02)75235-1) Copyright © 2002 The Biophysical Society Terms and Conditions

Figure 2 Polarized light microscopy textures of supercoiled pUC18 DNA in 0.1M NaCl. (a) Cholesteric spherulites immersed in isotropic phase, 5g of DNA/dm3, 1000×; (b) nonaligned cholesteric phase, 15g of DNA/dm3, 1000×; (c) same as in b but after prolonged exposure to a 14-T magnetic field; (d) spherulites of supercoiled DNA in a crystalline state, 25g of DNA/dm3, 630×; (e) merged crystalline spherulites, 30g of DNA/dm3, 1000×. Biophysical Journal 2002 83, 1119-1129DOI: (10.1016/S0006-3495(02)75235-1) Copyright © 2002 The Biophysical Society Terms and Conditions

Figure 3 Liquid-crystalline volume fraction versus average DNA concentration in biphasic pUC18 solutions (σ=−0.03), (○): 0.1M; (▿): 0.2M; (◊: 0.4M; (△), 0.6M NaCl. The lines represent least-squares fits to extrapolate to the critical boundaries ci and ca, i.e., the concentration at which the anisotropic phase first appears and the isotropic phase disappears, respectively. Biophysical Journal 2002 83, 1119-1129DOI: (10.1016/S0006-3495(02)75235-1) Copyright © 2002 The Biophysical Society Terms and Conditions

Figure 4 Critical boundaries pertaining to the isotropic-cholesteric phase transition versus the concentration added salt (T=298 K). Open symbols, ci; closed symbols, ca. The dashed-dotted curves are calculated with hard-core and electrostatic interactions in the second virial approximation; ri=ra=10nm, αi=αa=65°. The other curves are calculated with the scaled particle description for hard-core effects and electrostatic interactions in the second virial approximation; dashed curves, ri=ra=10nm, αi=αa=65°; solid curves, ri=10nm, αi=65°, ra=7.5nm, αa=58°. Biophysical Journal 2002 83, 1119-1129DOI: (10.1016/S0006-3495(02)75235-1) Copyright © 2002 The Biophysical Society Terms and Conditions

Figure 5 Temperature dependent phase diagram of pUC18 DNA solutions (σ=−0.03). (○): 0.1M; (▿): 0.2M; (◊): 0.4M; (△), 0.6M NaCl. Open symbols, ci, closed symbols, ca. The lines connect the theoretical phase boundaries calculated with ri=10, 9.4, and 8.9nm with αi=65°; ra=7.5, 6.9, and 6.4nm with αa=58° for T=298, 308, and 328K, respectively. Biophysical Journal 2002 83, 1119-1129DOI: (10.1016/S0006-3495(02)75235-1) Copyright © 2002 The Biophysical Society Terms and Conditions