Fig. 4 Matrix for intersections of differentially expressed transcripts between RNAiAFL transgenic and null kernels. Matrix for intersections of differentially.

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Fig. 4 Matrix for intersections of differentially expressed transcripts between RNAiAFL transgenic and null kernels. Matrix for intersections of differentially expressed transcripts between RNAiAFL transgenic and null kernels. The intersection of six pairwise comparisons between two nontransgenic (Null A and Null B) samples and three transgenic (AFL4, AFL5, and AFL20) samples are shown. Set size was sorted by the number of significantly differentially expressed transcripts within a given pairwise comparison (horizontal orange bars). Dark circles in the matrix indicate sets of transcripts that are part of an intersection. The number of intersecting transcripts that are differentially expressed within the given grouping is shown in green. The matrix intersection of the comparison of the three RNAiAFL transgenic lines among themselves and the two Null controls shows similar or larger intersections of the number of differentially expressed transcripts (fig. S3). A generated table shows the significantly expressed transcripts detected in all six pairwise comparisons used to generate this matrix (available online at http://de.iplantcollaborative.org/dl/d/24DC6B1C-EF2C-4A00-9EBF-85B43234E88C/Pairwise_Sig_Transcripts_with_Function.xlsx). Dhiraj Thakare et al. Sci Adv 2017;3:e1602382 Copyright © 2017, The Authors