Conformational B cell epitopes of MAP2312c (fadE19) predicted from the 3D structure template under PDB ID 1JQI (a crystal structure of rat short-chain.

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Conformational B cell epitopes of MAP2312c (fadE19) predicted from the 3D structure template under PDB ID 1JQI (a crystal structure of rat short-chain acyl-CoA dehydrogenase complexed with acetoacetyl-CoA). Conformational B cell epitopes of MAP2312c (fadE19) predicted from the 3D structure template under PDB ID 1JQI (a crystal structure of rat short-chain acyl-CoA dehydrogenase complexed with acetoacetyl-CoA). In the ball-and-stick model, yellow balls are the residues of predicted epitopes (E1 to E8) and white sticks are the structures for nonepitope and core residues. Each epitope is shown with predicted residues (abbreviated amino acids) and residue positions (superscript numerals): E1, ARSLGLS382–388; E2, YAKERQSFGQPIGSYQAISF272–291; E3, GGY347–349-FMNEY351–355; E4, AGTLPK7–12-QD15–16; E5, RLEDGE147–152-V154-N156-TPG198–200-SD223–224-R226-E229; E6, GTVGAD180–185-K187-G237; E7, MTT1–3; and E8, AGKP316–319. Ratna B. Gurung et al. Clin. Vaccine Immunol. 2012; doi:10.1128/CVI.00114-12