PANEL DISCUSSION – INDIAN PERSPECTIVE A.Das Gupta, MD, PhD Super Religare Laboratories.

Slides:



Advertisements
Similar presentations
Acute Myeloid Leukemias Diagnosis in The Light of WHO Revisions And Correlation With Risk Adaptive Management ; Case Discussions Dr. Rania Medhat Seliem.
Advertisements

The WHO Classification of Hematological Malignancies
Comparison of the diagnostic accuracy of BNP & NTPro-BNP in Acute and Chronic Heart Failure by Jamie Al-Nasir.
STATISTICS INTERVAL ESTIMATION Professor Ke-Sheng Cheng Department of Bioenvironmental Systems Engineering National Taiwan University.
Disability status in Ethiopia in 1984, 1994 & 2007 population and housing sensus Ehete Bekele Seyoum ESA/STAT/AC.219/25.
WORKFORCE PLANNING June 2011 Amr Fouad Training & Research Sector Ministry of Health & Population.
CALENDAR.
Lecture 2 ANALYSIS OF VARIANCE: AN INTRODUCTION
The 5S numbers game..
A Fractional Order (Proportional and Derivative) Motion Controller Design for A Class of Second-order Systems Center for Self-Organizing Intelligent.
Factoring Quadratics — ax² + bx + c Topic
McGraw-Hill/Irwin McGraw-Hill/Irwin Copyright © 2009 by The McGraw-Hill Companies, Inc. All rights reserved.
CP Unknown Heme-10/19/2011 Kumaran Mudaliar and Girish Venkataraman
1 Slides revised The overwhelming majority of samples of n from a population of N can stand-in for the population.
Localisation and speech perception UK National Paediatric Bilateral Audit. Helen Cullington 11 April 2013.
Oil & Gas Final Sample Analysis April 27, Background Information TXU ED provided a list of ESI IDs with SIC codes indicating Oil & Gas (8,583)
TCCI Barometer March “Establishing a reliable tool for monitoring the financial, business and social activity in the Prefecture of Thessaloniki”
QUALITY CONTROL IN HEMATOLOGY
AP STATISTICS LESSON 12 – 2 ( DAY 2 )
Opportunities for Prevention & Intervention in Child Maltreatment Investigations Involving Infants in Ontario Barbara Fallon, PhD Assistant Professor Jennifer.
TCCI Barometer September “Establishing a reliable tool for monitoring the financial, business and social activity in the Prefecture of Thessaloniki”
Before Between After.
2011 FRANKLIN COMMUNITY SURVEY YOUTH RISK BEHAVIOR GRADES 9-12 STUDENTS=332.
1 Non Deterministic Automata. 2 Alphabet = Nondeterministic Finite Accepter (NFA)
Minimal Residual Disease in Hematologic Neoplasms Lloyd M. Stoolman, M.D. Professor of Pathology and Director, Clinical and Research Flow Cytometry Laboratories.
Case 10 New Frontiers in Pathology, 2009 William G. Finn, M.D.
CO-AUTHOR RELATIONSHIP PREDICTION IN HETEROGENEOUS BIBLIOGRAPHIC NETWORKS Yizhou Sun, Rick Barber, Manish Gupta, Charu C. Aggarwal, Jiawei Han 1.
4/4/2015Slide 1 SOLVING THE PROBLEM A one-sample t-test of a population mean requires that the variable be quantitative. A one-sample test of a population.
Publications Reviewed Searched Medline Hand screening of abstracts & papers Original study on human cancer patients Published in English before December.
Original Figures for "Molecular Classification of Cancer: Class Discovery and Class Prediction by Gene Expression Monitoring"
Approach to Acute Leukemia
Issues in Multicolor Flow Cytometry: Beyond 6 Colors
Instance-based Classification Examine the training samples each time a new query instance is given. The relationship between the new query instance and.
Quality Control in Immunophenotyping Dr. N. Varma Prof. & Head – Hematology Post Graduate Institute of Medical Education & Research (PGIMER), Chandigarh.
ECSI case Fall 2014 Andrea M. Sheehan, MD Associate Professor of Pathology & Immunology Baylor College of Medicine.
Predictive Automatic Relevance Determination by Expectation Propagation Yuan (Alan) Qi Thomas P. Minka Rosalind W. Picard Zoubin Ghahramani.
MT 417 – Clinical Hematology II Manual/Special Tests Unit
Expression of kinase genes in primary hyperparathyroidism; Adenoma versus hyperplastic parathyroid tissue Pinhas P. Schachter1 M.D., Suhail Ayesh2 PhD,
Flow Cytometric Abnormalities in Myelodysplastic Syndrome Raida Oudat,MD Consultant Hematopathologist at Princess Iman Research and Laboratory Sciences.
Introduction to Flow Cytometry
ICCS e-newsletter CSI Summer 2011 Jeannine T. Holden, MD Emory University School of Medicine Atlanta, GA.
Inputs to a case-based HIV surveillance system. Objectives  Review HIV case definitions  Understand clinical and immunologic staging  Identify the.
Conclusions We have developed a robust, quality controlled, sensitive method for MRD assessment in precursor B cell ALL which can be replicated in a multi.
Pei Lin, MD Department of Hematopathology UT M.D. Anderson Cancer Center, Houston, TX Monitoring of Minimal Residual Disease Principles and Applications.
STATE HEALTH PLAN REQUEST FOR REVIEW OF DONOR COVERAGE BENEFITS Presented by: S. Elizabeth Sharf August 2015.
Scenario 6 Distinguishing different types of leukemia to target treatment.
Class Prediction and Discovery Using Gene Expression Data Donna K. Slonim, Pablo Tamayo, Jill P. Mesirov, Todd R. Golub, Eric S. Lander 발표자 : 이인희.
Evolutionary Algorithms for Finding Optimal Gene Sets in Micro array Prediction. J. M. Deutsch Presented by: Shruti Sharma.
Molecular Classification of Cancer: Class Discovery and Class Prediction by Gene Expression Monitoring T.R. Golub et al., Science 286, 531 (1999)
Case Study: Characterizing Diseased States from Expression/Regulation Data Tuck et al., BMC Bioinformatics, 2006.
Eigengenes as biological signatures Dr. Habil Zare, PhD PI of Oncinfo Lab Assistant Professor, Department of Computer Science Texas State University 5.
Minimal Residual Disease(MRD) detections by Flow Cytometry in Acute Leukemia 혈액학파트 안 미 숙.
Hematology There are four lectures: 1.Acute leukemias (2 hours). 2.Chronic leukemias (2 hours).
Society for Hematopathology/European Association for Haematopathology 2013 Case Number 208 Erika Moore, MD; Darshan Roy, MD; Patti Cohen, MD; Adam Bagg,
Predictive Automatic Relevance Determination by Expectation Propagation Y. Qi T.P. Minka R.W. Picard Z. Ghahramani.
Acute Leukemia Kristine Krafts, M.D..
Gene expression.
Alan Qi Thomas P. Minka Rosalind W. Picard Zoubin Ghahramani
Gene Expression Classification
Early T-Cell Precursor ALL in 5 Year Old Female
Molecular Classification of Cancer
Acute Myeloid Leukemia
IMMUNOPHENOTYPING LEUKEMIAS AND LYMPHOMAS
Volume 1, Issue 2, Pages (March 2002)
Global approach to the diagnosis of leukemia using gene expression profiling by Torsten Haferlach, Alexander Kohlmann, Susanne Schnittger, Martin Dugas,
by David Grimwade, and Sylvie D. Freeman
A Strong Expression of CD44-6v Correlates With Shorter Survival of Patients With Acute Myeloid Leukemia by S. Legras, U. Günthert, R. Stauder, F. Curt,
Volume 17, Issue 1, Pages (January 2010)
Outline of antibody groups used in panels for identification of AML-aberrant immunophenotypes (both for LAIP and “different-from-normal” approaches) and.
Presentation transcript:

PANEL DISCUSSION – INDIAN PERSPECTIVE A.Das Gupta, MD, PhD Super Religare Laboratories

Points for discussion QA Tests offered by SRL Practical issues Potential areas of collaboration

TESTS OFFERED BY SRL Lymphocyte subset enumeration (T, B & NK) (2-colour, 3-colour, 4-colour) Leukemia/lymphoma immunophenotyping PNH diagnosis by RBC analysis HLA B27 typing Zap 70 DNA/Cell cycle analysis

ISSUES General issues Cost – Instrument upgrading (multicolour assays), Reagent cost, “Ideal” (often large) panels Validation Trained manpower Distant testing Specific issues DNA/Cell cycle analysis Review indications (Hematolymphoid, Solid tumours) Standardize assay MDS diagnosis Need for each lab to develop its own data on normal antigenic profile of hematopoietic cells

Strategy for Two-colour Pan LeucoGating-CD4 Count

Correlation of CD4 lymphocyte counts by Tetrachrome and PLG-CD4 reagent

Conclusion 1 CD4 lymphocyte counts obtained by PLG- CD4 (2-colour) reagent (one-third cost) showed a high degree of correlation with those obtained by more expensive Tetrachrome (4-colour) reagent

Stability of CD4 counts in EDTA

Stability of CD4 counts in heparin

Conclusion 2 Suitability of anticoagulants For two colour CD4 enumeration using Pan LeucoGating (PLG) strategy heparin was found to be as good an anticoagulant for distant testing as EDTA (48 hrs). Allowable time since collection Forty-eight hrs in EDTA and Heparin

Correlation between CD4 counts obtained by using full and half volume reagents

Conclusion 3 Excellent correlation was observed between CD4 lymphocyte subset counts obtained by using the recommended volume of reagents and those obtained by half the recommended volume

POTENTIAL AREAS OF COLLABORATION Zap 70 assay standardization Immunodeficiency panels Wider and more organized PT programme Sharing of patient data and other information Role of premier (teaching) institutions and reference laboratories

Thank you

Proposed Scoring System for Immunophenotypic Distinction between Acute Myelogenous Leukemia with Thymic (T) Markers and T-Acute Lymphoblastic Leukemia with Myeloid Markers A. Das Gupta, M. Ramani, A. Vazifdar and V. Mehrotra Super Religare Laboratories, India

Background ●A commonly observed example of expression of trans- lineage markers by blast cells in AL is the expression of T lymphoid markers by myeloblasts in AML (20-40%) [AML(T)] Conversely, 20-30% of T-ALL cases express myeloid markers [T-ALL(M)]. ●An accurate distinction between these two entities using commonly applied primary antibody panels is a significant challenge. ●Even the use of an advanced software (Infinicyt) and EuroFlow ALOT that includes cytoplasmic markers was not able to correctly classify >3% (5/157) cases of AL. All these cases had an overlapping myeloid and T- lymphoid phenotype.

APS (Automated Population Separation) : Unsupervised classification of the different leukemias by principal component analysis (PCA). Based on the ALOT combination, all typical cases of AL (152/157) can be recognized with the new approach. No case was misclassified.

Five atypical cases of AL clustered together either in an area comprised between AML and T-ALL cases, or at the bottom of the 2 clusters. There was no equivalent B/AML overlap.

Therefore, there is a need for identifying immunophenotypic features of blast cells in these two conditions and develop a method/system that will allow distinction between these two entities.

Four-Colour Primary Antibody Panel Used Myeloid markers CD13, CD33, CD117 Lymphoid markers CD3, CD5, CD7, CD10, CD19, CD20, CD22 Non-lineage markersCD34, HLA-DR Cytoplasmic markers cMPO, cCD3, cCD79a

Results Total leukemia cases1874 AML 791 (42%) Classical AML647 (82%) AML(T)144 (18%) ALL(B+T)1071 (57%) T-ALL128 (12%) Classical T-ALL85 ( 66%) T-ALL(M)43 (34%)

COMPARISON OF EXPRESSION OF LINEAGE- ASSOCIATED MARKERS IN AML(T) AND IN T-ALL(M) CD markers expression AML(T) (144) T-ALL(M) (43) Scoring System favoring myeloblasts CD45DimNormal- CD54(0.03%)28(65%)Negative=2 CD102 (01%)9 (21%)Negative=1 CD13131(91%)8(19%)Positive=1 CD (88%)18 (42%)Positive=0.5 HLA-DR135 (94%)10 (23%)Positive=1

All cases of T-ALL with or without myeloid marker expression had a score of =/<3.5 All cases of AML with or without T- lymphoid markers had a score =/>4.5 Cases of true mixed lineage leukemia had a score between

We have applied the scoring system in a prospective manner to test its power in predicting the correct diagnosis. We are refining the scoring system further by adopting statistical methods.

Something more…..

Panel Discussion – Some Issues in Lymphocyte Subset Enumeration… A. Das Gupta, M. Ramani, V. Mehrotra and A. Vazifdar Super Religare Laboratories, India

Issues in Lymphocyte Subset Enumeration Cost-related Issues Cost-effective CD4+ lymphocyte subset enumeration (two colour reagent vs 3-4 colour reagent) Use of lower volume of reagents per assay Issues of distance testing Transit time in distant testing scenario – allowable time from sample collection and suitability of anticoagulants

Issues in Lymphocyte Subset Enumeration Cost-related Issues Cost-effective CD4+ lymphocyte subset enumeration (two colour reagent vs 3-4 colour reagent) Use of lower volume of reagents Issues of distance testing Transit time in distant testing scenario – allowable time from sample collection and suitability of anticoagulants

Issues in Lymphocyte Subset Enumeration Cost-related Issues Cost-effective CD4+ lymphocyte subset enumeration (two colour reagent vs 3-4 colour reagent) Use of lower volume of reagents Issues of distance testing Transit time in distant testing scenario – allowable time from sample collection and suitability of anticoagulants