Adsorption Induced Single Layer Area Increase and Collapse of Vesicles May Kavli Institute Dan Hu Department of Mathematics &Institute of Natural.

Slides:



Advertisements
Similar presentations
Cholesterol Distribution in Living Cells: Fluorescence Imaging Using DHE as a Fluorescent Cholesterol Analog. Sushmita Mukherjee, et al. Oct Danielle.
Advertisements

Zoe Cournia 25 October 2004 Cholesterol vs. Ergosterol / Lanosterol in Membrane S(t)imulations.
Self-organized peptide Peptide induced transmembrane
The Role of Long-Range Forces in Porin Channel Conduction S. Aboud Electrical and Computer Engineering Department, Worcester Polytechnic Institute, Worcester.
Synthesis of Nanocells Titima Songkroh Mahidol University.
Trapping of Hydroxyl Radical and Ozone at Salt Aerosol Surfaces: A Molecular Dynamics Study Martina Roeselová, a Douglas J. Tobias, b R. Benny Gerber,
Computational Issues in Modeling Ion Transport in Biological Channels: Self- Consistent Particle-Based Simulations S. Aboud 1,2, M. Saraniti 1,2 and R.
Introduction to DYNAMIC LIGHT SCATTERING (DLS) Christer Svanberg or PHOTON CORRELATION SPECTROSCOPY (PCS)
Computation for this work was supported by the University of Southern California Center for High-Performance Computing and Communications (
P. S. Wei Xi-Wan Chair Professor Department of Mechanical and Electro-Mechanical Engineering National Sun Yat-Sen University Kaohsiung, Taiwan 80424, ROC.
1 Chi-cheng Chiu The University of Texas at Dallas 12/11/2009 Computer Simulations of the Interaction between Carbon Based Nanoparticles and Biological.
Thermally Stable Boundary Layers Emily Moder – Grand Energy Challenges.
Exploring Protein Motors -- from what we can measure to what we like to know Hongyun Wang Department of Applied Mathematics and Statistics University of.
Bologna on 28 May 2008 – IP EUROTRANS WP1.51 IE - Institute for Energy Petten - The Netherlands
 By bending single nanowires voltages are induced.  The electrical energy can be harnessed by contacting both ends of the nanowires. Thai Tran, Applied.
Technische Universität München Laboratory Experiments using Low Energy Electron Beams with some Emphasis on Water Vapor Quenching A. Ulrich, T. Heindl,
Morphological Changes of Liposomes Induced by Melittin Jirun Sun Full Talk for Macromolecules Seminar J, Dufourcq et al., BBA 859, 1986, 33.
Study on Effective Thermal Conduction of the Nanoparticle Suspension Calvin Hong Li Department of Mechanical, Aerospace & Nuclear Engineering Rensselaer.
A property of matter that enables an object to return to its original size and shape when the force that was acting on it is removed. Elasticity.
IPTC workshop in China Mahn Won Kim (1), Joon Heon Kim (1,2) (1) Dept. of Physics, KAIST, (2) APRI, GIST Adsorption and Transport of a Small Molecule on.
Ch. 8 Cells & Their Environment
Electropore Life Cycles in Heterogeneous Phospholipid Bilayers in the Presence of Calcium Zachary A. Levine 1,2 and P. Thomas Vernier 1,3 1 MOSIS, Information.
Thu, 6/5: Simulating Membrane Channels (E. Tajkhorshid) 09:00-10:00 Introduction and Examples 10:00-11:00 Transport in Aquaporins Coffee Break 11:30-12:30.
Membrane Rafts ‘70s ‘40s‘50s. Membrane Microdomains Raft is a specific type of microdomain – sphingolipid/cholesterol rich region “Separation of discrete.
Non-classical Export of Signal Peptide-less Proteins Studied via Vibrational Spectroscopy and Liposome Destabilization Techniques Andrew Doyle Functional.
Detergents – amphipathic/amphiphillic molecules that have a limited solubility and above a critical concentration form micelles (CMC). micellemonomer When.
Ferroelectric Nanolithography Extended to Flexible Substrates Dawn A. Bonnell, University of Pennsylvania, DMR Recent advances in materials synthesis.
Molecular Dynamics Simulation of Membrane Channels Part III. Nanotubes Theory, Methodology Summer School on Theoretical and Computational Biophysics June.
Introduction to Statistical Thermodynamics of Soft and Biological Matter Lecture 2 Statistical thermodynamics II Free energy of small systems. Boltzmann.
2010 RCAS Annual Report Jung-Hsin Lin Division of Mechanics, Research Center for Applied Sciences Academia Sinica Dynamics of the molecular motor F 0 under.
Suppression of Random Dopant-Induced Threshold Voltage Fluctuations in Sub-0.1μm MOSFET’s with Epitaxial and δ-Doped Channels A. Asenov and S. Saini, IEEE.
Tetraether macrocyclic lipid O O O OH OH OH O R 3 CH 3 CH 3 CH 3 CH 3 CH 3 CH 3 O O CH 3 CH 3 CH 3 CH 3 CH 3 CH 3 CH 3 PO 4 R 1 CH 3 OH Liposomes are spherical.
Biological membranes: different cellular organelles have different lipid and protein membrane compositions.
1 MOSIS, Information Sciences Institute, Viterbi School of Engineering (VSoE), University of Southern California (USC), Marina del Rey, USA 2 Department.
PH-Sensitive Liposomes for Effective Release of Therapeutics By: Savita Ramlall Mentor: Professor Sofou & Shrirang Karve Polytechnic University Laboratory.
Dynamic Jamming Mitigation for Wireless Broadcast Networks Jerry T. Chiang Yih-Chun Hu 2007.
Simulation of Phase transformation behavior of NiTi doped with Cu during loading using classical molecular dynamics S. Aich, A. Behera and S. Ghosh Department.
Presenter: Kai Cao Supervisor: Prof. Xiaosong Wang Department: Chemistry Synthesis and Self-Assembly of Main-Chain Metal Carbonyl Organometallic Macromolecules.
DEVELOPMENT OF PIXELLATED SEMICONDUCTOR DETECTORS FOR NEUTRON DETECTION Prof. Christer Fröjdh Mid Sweden University.
Dodecaborate clusters forms stable pores in lipid membranes
LIPOSOMES AS DRUG CARRIERS
MD by Quantum Mechanics
Aquaporins of known structure:
Same chromophore – different absorption maximum
Cells and Their Environment
Lecture 14 Dr. Souradyuti Ghosh
Antifungal Drugs Fungal infections (Mycoses) Often chronic in nature.
Tong Zuo, Xiaoliang Li, Soumil Shah, Advisor: Prof. Xingguo Xiong
An All-Atom Molecular Dynamics Study
Brent P. Krueger Hope College Department of Chemistry
Study on the Self-assembly of Diphenylalanine-based Nanostructures by Coarse-grained Molecular Dynamics Cong Guo and Guanghong Wei Physics Department,
Volume 93, Issue 5, Pages (September 2007)
Volume 89, Issue 5, Pages (November 2005)
Reversible Liposome Association Induced by LAH4: A Peptide with Potent Antimicrobial and Nucleic Acid Transfection Activities  Arnaud Marquette, Bernard.
Pulsatile Lipid Vesicles under Osmotic Stress
Tae-Young Kim*, Seung-Hyup Lee, Churl Seung Lee,
Ge nanostressors on silicon-on-insulator (SOI)
Highly Selective Sieving in Porous Graphene-like Carbon Nitride for Helium/Light Isotopes Separation Yuanyuan Qu
Modified Fullerene Vesicles and Membranes,
Angew. Chem. Int. Ed., 2012, 51, Photocontrol of the Translocation of Molecules, Peptides, and Quantum Dots through Cell and Lipid Membranes.
Detection of Ultra-Violet Radiations in SonoLuminescence
Volume 95, Issue 9, Pages (November 2008)
Hung-Yu Chang, Xuejin Li, George Em Karniadakis  Biophysical Journal 
Toasty Marshmallow Lab
Alternative Mechanisms for the Interaction of the Cell-Penetrating Peptides Penetratin and the TAT Peptide with Lipid Bilayers  Semen Yesylevskyy, Siewert-Jan.
Andrew Lawrie & Stuart Dalziel G. K. Batchelor Laboratory,
Peptide-membrane Interactions: Peptide Insertion
Alexander Spaar, Christian Münster, Tim Salditt  Biophysical Journal 
Ana Coutinho, Liana Silva, Alexander Fedorov, Manuel Prieto 
Volume 96, Issue 3, Pages (February 2009)
Presentation transcript:

Adsorption Induced Single Layer Area Increase and Collapse of Vesicles May Kavli Institute Dan Hu Department of Mathematics &Institute of Natural Sciences Shanghai Jiao Tong University Joint work with Yukun Wang & Dongqing Wei

Background---Antimicrobials 1.Alarming increase in bacterial resistance Traditional antibiotics --- drug resistance Super bacteria 2. Membrane - permeabilizing antimicrobial peptides (AMPs) Less induced resistance 3. Mimics of AMPs Diversity Possibly---Less metabolizable Possibly---Low immunogenicity

AMP mechanisms William et al Possible mechanism of membrane permeabilization induced by AMPs:

Mimics C8 (C6, C4) Polyoctamethylene guanidine hydrochloride is mimics of AMPs Amphiphilic & Charged C8 (n=3): 8 CH 2 in each monomer.

Leakage of fluorescence dye (50nm POPC liposome induced by C8)

Leak mechanism of C8 1. Charges Hard to form trans-membrane structures through thermal fluctuation 2. Maximum Leakage < 100% No steady trans-membrane pores 3. Possible mechanism Rupture of membrane? Instantaneous pores?

Vesicles (POPC:PSM:CHOL=1:1:1) before and after applying C8 (50 ) Vesicle rupture

Effects of the drug Adsorption ---- out layer area increase ---- shape change & rupture

Is the area really increased? ---- MD simulation Effective area per lipid MD time (ns) ±0.008 nm ±0.007 nm ±0.009 nm 2 C8C6C4 Pure POPC 0.615nm 2 Drug & POPC

C4C6C8 POPC3.74±1.46%7.97 ±1.13%11.4±1.34% POPC:CHOL:PSM-0.732±1.21%3.66±0.49%5.61±0.24% Summary of area extension rate

The molecular origin of different extension rate mammalian membrane by C4 and C8

Experimental method vesicle fluorescent dye leakage experiment Dynamical light scatter experiment Used to measure the size distribution of the liposome in the solution The size and PDI (PolydisDersity Index) measured by dynamical light scatter With small PDI valueWith big PDI value

Experimental validation on POPC membrane POPC vesicle fluorescent dye leakage experiment with different vesicle size C4 C6 C8 0.5ug/mlno signal0.5ug/mlno signal0.5ug/ml 3.0% 1ug/mlno signal1ug/mlno signal1ug/ml 6.0% 3ug/mlno signal3ug/mlno signal3ug/ml 10% 10ug/mlno signal10ug/mlno signal10ug/ml 33% 100ug/mlno signal100ug/mlno signal100ug/ml 50% C4 C6 C8 0.5ug/mlno signal0.5ug/ml 11% 0.5ug/ml 22% 1ug/mlno signal1ug/ml 13% 1ug/ml 26% 3ug/ml 3.6% 3ug/ml 7.5% 3ug/ml 33% 10ug/ml 8.4% 10ug/ml 7.4% 10ug/ml 40% 100ug/ml 6.8% 100ug/ml 5.0% 100ug/ml 41% 400nm C4 C6 0.5ug/mlno signal0.5ug/mlno signal 1ug/mlno signal1ug/mlno signal 3ug/mlno signal3ug/mlno signal 10ug/mlno signal10ug/mlno signal 100ug/mlno signal100ug/mlno signal C8 10ug/ml 33% 100ug/ml 58% 150ug/ml 58% 250ug/ml 59% 100ug/ml 57% Filter size 400nm100nm50nm PDI average D 183nm93nm52nm 50nm 100nm The size and PDI (PolydisDersity Index) measured by dynamical light scatter

Leakage result

Modeling study Results: No rupture when is small. Small leakage when Multi-rupture

Modeling study Other possible effects: 1. Partially filled Relaxation through deformation 2. Tolerance to stretch Energy barrier Effectively reduce

Modeling study

C4 50ug/ml C8 50ug/ml C6 50ug/ml Add water Drug effect POPC:PSM:CHOL =1:1:1

C4 50ug/ml C8 50ug/ml C6 50ug/ml Add water The size and PDI of liposome can be measured by Dynamic Light Scattering technique. PDI Average Diameter blank1>1um c41>1um c ~600nm c ~200nm Experimental validation on mammalian membrane

1. Area extension can induce vesicle rupture. 2. Content releasing and rupture are size dependent. 3. Differences in membranes can be used in drug designing. conclusion

Thank you!