Supplemental Fig. S1 Icelogo plots of HLA-A2, HLA-B7 and HLA-B44 binding peptides of 8-14 mer length and Icelogo plots of HLA-C binding peptides of 8-11.

Slides:

Advertisements

Similar presentations

Similar Figures.... have the same shape but not necessarily the same size example: Figure 1 Figure 2.

Advertisements

Fig. 4-1, p Fig. 4-2, p. 109 Fig. 4-3, p. 110.

2-D and 3-D Coordinates For M-Mers And Dynamic Graphics For Representing Associated Statistics By Daniel B. Carr George Mason University.

Supplemental Figure 1 A No. at risk T T T

Gibbs sampling Morten Nielsen, CBS, BioSys, DTU. Class II MHC binding MHC class II binds peptides in the class II antigen presentation pathway Binds peptides.

Slide 1Fig. 22.1, p.669. Slide 2Fig. 22.3, p.670.

Slide 1Fig. 17.1, p.513. Slide 2Table 17.1, p.514.

Slide 1Fig. 16.1, p.488. Slide 2Fig. 16.2, p.488.

P.464. Table 13-1, p.465 Fig. 13-1, p.466 Fig. 13-2, p.467.

Fig. 11-1, p p. 360 Fig. 11-2, p. 361 Fig. 11-3, p. 361.

Table 6-1, p Fig. 6-1, p. 162 p. 163 Fig. 6-2, p. 164.

Displays of variables Measurement Variables (interval, ratio) Frequency distributions Histograms Stem and leaf displays Scatterplots.

Figure 1.1 The observer in the truck sees the ball move in a vertical path when thrown upward. (b) The Earth observer views the path of the ball as a parabola.

Slide 1Fig. 3.1, p.59. Slide 2Fig. 3.2, p.59 Slide 3Fig. 3.2a, p.59.

Quartiles & Extremes (displayed in a Box-and-Whisker Plot) Lower Extreme Lower Quartile Median Upper Quartile Upper Extreme Back.

The Major Histocompatibility Complex (MHC) In all vertebrates there is a genetic region that has a major influence on graft survival This region is referred.

Section 2.2 Bar Graphs, Circle Graphs, and Time-Series Graphs 2.2 / 1.

T-cell & B cell receptors – role in immune response & Major Histocompatibility Complex (MHC) Lecture 6 4/10/2015.

LINE PLOTS LD 2011 A LINE PLOT is…  A diagram that shows data displayed on a number line. Line plots clearly show each piece of data.  Line plots clearly.

(C) 2002, SNU Biointelligence Lab, Strategies for the development of a peptide computer Hubert Hug and Rainer Schuler Bioinformatics,

Fig. 6-CO, p p. 185a p. 185b p. 185c p. 185d.

Lect2 Time Domain Analysis

Fig. 4 Disease gene prediction based on multiple CSNs

Kinesin transport: driving kinesin in the neuron

Major Histocompatibility complex OR

عناصر المثلثات المتشابهة Parts of Similar Triangles

SPR characterization of the specific interaction between AuNP–Pep1 and HEWL. (A) Binding of AuNPs functionalized with 20 Pep1 and different numbers of.

T-cell epitopes within the complementarity-determining and framework regions of the tumor-derived immunoglobulin heavy chain in multiple myeloma by Lotta.

Key amino acid positions identified by association analysis are highlighted in three-dimensional ribbon models for the HLA-DR, HLA-DQ, HLA-A and HLA-DP.

Multiplex PCR of three dinucleotide markers in the HLA class I region: D6S2792, D6S273 and D6S2972 E.M. Schwartz-Jungl, E.M. Dauber, S. Wenda, G. Dorner,

Supplemental Figure S1. Alignment of drimenol synthase amino acid sequences from P. hydropiper and V. officinalis. Amino acid sequences were aligned with.

Biomarkers in Cancer Immunotherapy

Applications of Immunogenomics to Cancer

Supplemental oxygen and surgical site infection: getting to the truth

Volume 22, Issue 8, Pages (August 2015)

Supplemental Materials

Similar Figures.

Morten Nielsen, CBS, BioSys, DTU

Phosphopeptides identified harboring minimal binding motifs

Characterization of human memory CD4+ T-cell responses to the dog allergen Can f 4 Aino L. Rönkä, MD, Tuure T. Kinnunen, MD, PhD, Amélie Goudet, BSc,

Peptide ID# Pulsed to T2-A24 Cells

Victoria M. Leb, MSc, Beatrice Jahn-Schmid, PhD, Klaus G

The MSP domain of MOSPD2 binds the FFAT motif with an affinity in the micromolar range The MSP domain of MOSPD2 binds the FFAT motif with an affinity in.

Fig. 6-CO, p. 211.

d a c b CD8 CD3 CD4 CD62L HLA-DR CD57 10% 85% 11% 76% 19% 60% 36% 66%

Supplemental Digital Content 3 – Figure 2

Multiplex PCR of three dinucleotide markers in the HLA class I region: D6S2792, D6S273 and D6S2972 E.M. Schwartz-Jungl, E.M. Dauber, S. Wenda, G. Dorner,

Peanut T-cell epitope discovery: Ara h 1

A study of one soil, its relatives and contaminants by arbitrary primed PCR with 50mer based analysis Leigh Burgoyne, Lin Koh, David Catcheside Forensic.

Volume 25, Issue 5, Pages (November 2006)

Binding Affinity and Interaction of LL-37 with HLA-C

Similarities Differences

Trends in metabolite predictability in terms of key gene contributors.

Motif enrichment and codon usage are not correlated.

This document is a supplement to the article ‘Large near-surface block rotations at normal faults of the Iceland rift: evolution of tectonic caves and.

DQA epitope on DQA4,5,6 chains

Phosphopeptides identified harboring minimal binding motifs

Analysis of LC8-binding and nonbinding motifs reveals distinct positional preferences. Analysis of LC8-binding and nonbinding motifs reveals distinct positional.

Similarity, Congruence, & Proofs

Supplemental Fig 1 (A) (B) (B) 59% % alive 52% Years from entry 59%

Specific recognition of HOM-MEL-40/SSX2-derived p pulsed targets by p stimulated T-cells from patients with HOM-MEL-40/SSX2 positive breast.

RTA pepscan analysis of sera from RiVax- and RVEc-immunized mice.

ADNs are largely distinct from CDNs

HLA-A*0201 restriction of SSX2-derived p stimulated CD8+ T-cells.

Reaction strength (MFI)

Amino acid sequence similarity among C

Identification, length distribution, and motif analysis of linear and spliced peptides by a combined de novo library searching hybrid workflow approach.

Presentation transcript:

Supplemental Fig. S1 Icelogo plots of HLA-A2, HLA-B7 and HLA-B44 binding peptides of 8-14 mer length and Icelogo plots of HLA-C binding peptides of 8-11 mer length. Peptides of different length clearly display a similar binding motif.

HLA-A2 61 peptides

HLA-A2 3302 peptides

HLA-A2 712 peptides

HLA-A2 621 peptides

HLA-A2 137 peptides

HLA-A2 83 peptides

HLA-A2 17 peptides

HLA-B7 219 peptides

HLA-B7 1964 peptides

HLA-B7 630 peptides

HLA-B7 449 peptides

HLA-B7 86 peptides

HLA-B7 58 peptides

HLA-B7 27 peptides

HLA-B44 29 peptides

HLA-B44 1180 peptides

HLA-B44 937 peptides

HLA-B44 576 peptides

HLA-B44 244 peptides

HLA-B44 81 peptides

HLA-B44 14 peptides

HLA-C 45 peptides

HLA-C 721 peptides

HLA-C 168 peptides

HLA-C 101 peptides