ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH www.indianactsi.org Indiana CTSI Bill Barnett and Anurag Shankar Research Technologies and PTI, Indiana.

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Presentation transcript:

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH Indiana CTSI Bill Barnett and Anurag Shankar Research Technologies and PTI, Indiana University HUBbub: April 6, 2011

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH What this talk is about… Collaboration background Indiana CTSI HUB Applications CTSA collaboration initiatives Future Directions

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH Collaboration Background The intellectual capital needed to undertake scholarly research is no longer found at a single lab or institution. Collaborative research is becoming the norm. The resources necessary for research are distributed. Online public research datasets are changing the research process.

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH Collaboration Trends Persistence beyond face to face relationships requires: Motivations and Rewards Trust Dealing with cultural differences Governance and Management Shared Infrastructures and resource management Metrics and Assessment Sustainability – financial, intellectual, infrastructure Cf. Beyond Being There: A Blueprint for Advancing the Design, Development, and Evaluation of Virtual Organizations (

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH Types of Research Collaborations Communities of scholars who share tools. (eg., nanoHUB) Distributed research projects with online analytical workflows. (eg., cceHUB) Institutional collaborations to accelerate research processes and activities. (eg., IndianaCTSI HUB)

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH Statewide multi-institutional initiative ‘Translation’ of research from basic to pre-clinical to clinical research, ultimately to improve health care. Focus on process improvement (funding, collaboration, research administration) Communities other than Researchers The Indiana CTSI HUB

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH Indiana CTSI HUB Foundations The Usual HUB capabilities… Modular ‘Model View Controller’ Architecture Built in publishing tools, etc. for sharing content Over 6800 Joomla extensions to add functionality We add… Federated Identity support for authentication Ontology-based tagging in partnership with the National Center for Biomedical Ontologies (NCBO)

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH Indiana CTSI HUB Applications Grant Management System (Open Journal System) Public listing of Clinical Trials Online Core Facilities Small Group Collaboration/File Sharing (Alfresco Share) Data Collection and Management (REDCap) Matchmaking for licensing to industry (i2iconnect) Volunteer Recruitment for Clinical Trials (INResearch) Newsletter

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH Alfresco Share 500 Users and 5 GB of documents.

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH REDCap 175 Users and 110 Projects.

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH i2iconnect 914 Listings and 542 Users.

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH INResearch.org Public portal to recruit volunteers for clinical trials Collects medical information for prospective volunteers To do: develop a researcher interface into this to recruit for trials and integrate data from Indiana Health Information Exchange (IHIE)

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH CTSA Research Networking VIVO (vivoweb.org) Ontology of terms for faculty profiles A set of architectural standards, based on Linked Open Data Applications that consume Linked Open Data (like VIVO) Eagle-I (eagle-i.org) Ontology of terms for resources (cores, databases, biobanks) Architectural standards of resource inventory systems Integrated system for managing and exposing resources Direct2Experts (direct2experts.org) 29 CTSAs demonstrating federated profile search.

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH Future Directions Profile Integration with Faculty Profiles with VIVO, Faculty profile systems at IUB and IUSM, and Indiana Database of University Research Expertise (INDURE). Creation of middleware to both consume and expose Linked Open Data (by August, 2011) as part of VIVO. CTSA2Community HUB (ctsa2community.org) as a repository of best practices for community engaged research. (Hopefully) BAH RFA for Linked Open Data

ACCELERATING CLINICAL AND TRANSLATIONAL RESEARCH Thank you. Questions? Bill Barnett,