4. Expert Elicitations In the absence of empirical data appropriate to the proposed scope, we elicited expert knowledge to construct informed priors for.

Slides:



Advertisements
Similar presentations
Salt Marsh Restoration Site Selection Tool An Example Application: Ranking Potential Salt Marsh Restoration Sites Using Social and Environmental Factors.
Advertisements

Outcomes of The Living Murray Icon Sites Application Project Stuart Little Project Officer, The Living Murray Environmental Monitoring eWater CRC Participants.
Benefit Transfer of Non-Market Values – Understanding the concepts John Rolfe Central Queensland University.
Brief introduction on Logistic Regression
U.S. Department of the Interior U.S. Geological Survey USGS/EROS Data Center Global Land Cover Project – Experiences and Research Interests GLC2000-JRC.
Modeling species distribution using species-environment relationships Istituto di Ecologia Applicata Via L.Spallanzani, Rome ITALY
The Natural Disturbance Regime: Implications for Forest Management Glen W. Armstrong University of Alberta CIFFC Science Forum 4 November 1999.
Development of a Comprehensive Wildlife Conservation Strategy for Georgia Georgia Department of Natural Resources Wildlife Resources Division.
Results Using elicitation responses, we identified a scope (Figure 2), vision, and key ecological attributes for the conservation target (Antillean manatee),
Depicting uncertainty in wildlife habitat suitability models using Bayesian inference and expert opinion Southwest Regional GAP Project Arizona, Colorado,
 RBs oversee various programs and have specific information needs for each  e.g., 303(d), MS4, 401/wetlands, irrigated lands, point source dischargers,
What role should probabilistic sensitivity analysis play in SMC decision making? Andrew Briggs, DPhil University of Oxford.
Engineering Economic Analysis Canadian Edition
Parameterising Bayesian Networks: A Case Study in Ecological Risk Assessment Carmel A. Pollino Water Studies Centre Monash University Owen Woodberry, Ann.
CS 589 Information Risk Management 30 January 2007.
1 Quantifying Opinion about a Logistic Regression using Interactive Graphics Paul Garthwaite The Open University Joint work with Shafeeqah Al-Awadhi.
CS 589 Information Risk Management 6 February 2007.
Stepping Forward Population Objectives Partners in Flight Conservation Design Workshop April 2006 and Delivering Conservation.
Structural uncertainty from an economists’ perspective
Risk Management and Strategy Prioritisation Intelligence Step 8 - Risk Management and Strategy Prioritisaiton Considering the risks associated with action.
Simulation.
Mahanalobis Distance Dr. A.K.M. Saiful Islam Source:
Non-parametric Bayesian value of information analysis Aim: To inform the efficient allocation of research resources Objectives: To use all the available.
Robin McDougall, Ed Waller and Scott Nokleby Faculties of Engineering & Applied Science and Energy Systems & Nuclear Science 1.
Jeremy Erickson, Lucinda B. Johnson, Terry Brown, Valerie Brady, Natural Resources Research Institute, University of MN Duluth.
Most Common Conservation Practices Forestry Illinois.
1 Bayesian methods for parameter estimation and data assimilation with crop models Part 2: Likelihood function and prior distribution David Makowski and.
RAPID ASSESSMENT PROGRAM (RAP) Terrestrial Ecosystems Freshwater Ecosystems Marine Ecosystems.
WSEAS AIKED, Cambridge, Feature Importance in Bayesian Assessment of Newborn Brain Maturity from EEG Livia Jakaite, Vitaly Schetinin and Carsten.
HIT241 - RISK MANAGEMENT Introduction
Biodiversity: Habitat Quality and Rarity Brad Eichelberger.
An Introduction to the NC Natural Heritage Data Explorer (NHDE) Allison Schwarz Weakley, Conservation Planner NC Natural Heritage Program North Carolina.
Applications of Bayesian sensitivity and uncertainty analysis to the statistical analysis of computer simulators for carbon dynamics Marc Kennedy Clive.
1 Cumulative Impact Management: Cumulative Impact Indicators and Thresholds Presented by: Salmo Consulting Inc. and AXYS Environmental Consulting Ltd.
Proposed Action Purpose and Need A proposal to authorize, recommend, or implement an action in response to the need identified in the Purpose and Need.
Name: Angelica F. White WEMBA10. Teach students how to make sound decisions and recommendations that are based on reliable quantitative information During.
Lecture 1.2 Field work (lab work). Analysis of data.
LETABA ECOSYSTEM SERVICES CONSEQUENCES OF SCENARIOS Presented by: Greg Huggins Nomad 03 April 2014.
Engineering Economic Analysis Canadian Edition
1 Managing the Computational Cost in a Monte Carlo Simulation by Considering the Value of Information E. Nikolaidis, V. Pandey, Z. P. Mourelatos April.
Chapter 4 Linear Regression 1. Introduction Managerial decisions are often based on the relationship between two or more variables. For example, after.
17 May 2007RSS Kent Local Group1 Quantifying uncertainty in the UK carbon flux Tony O’Hagan CTCD, Sheffield.
USFWS’ Arctic Strategy: Managing Fish and Managing Fish and Wildlife Populations in a Changing Landscape SEARCH Science Steering Committee Meeting October.
Mysoltani.ir سایت فیلم روشهای مشارکتی Technology Foresight Foresight is about preparing for the future. It is about deploying resources in the best.
OECD World Forum on Statistics, Knowledge and Policy Measuring and Fostering the Progress of Societies Istanbul, 29 June 2007 BIODIVERSITY.
Group 6 Application GPS and GIS in agricultural field.
Three Frameworks for Statistical Analysis. Sample Design Forest, N=6 Field, N=4 Count ant nests per quadrat.
Chapter 11 Statistical Techniques. Data Warehouse and Data Mining Chapter 11 2 Chapter Objectives  Understand when linear regression is an appropriate.
Evidence Based Practice RCS /9/05. Definitions  Rosenthal and Donald (1996) defined evidence-based medicine as a process of turning clinical problems.
From Expert-based to Data-based Decision Support for Strategic Habitat Conservation Ashton Drew & Jaime Collazo NCSU Biology Department Biodiversity &
Keystone Species Keystone Species
Chapter 6: Analyzing and Interpreting Quantitative Data
1 Optimizing Decisions over the Long-term in the Presence of Uncertain Response Edward Kambour.
EBM --- Journal Reading Presenter :葉麗雯 Date : 2005/10/27.
Statistical Methods. 2 Concepts and Notations Sample unit – the basic landscape unit at which we wish to establish the presence/absence of the species.
Approaches to quantitative data analysis Lara Traeger, PhD Methods in Supportive Oncology Research.
Abstract A step-wise or ‘tiered’ approach has been used as a rational procedure to conduct environmental risk assessments in many disciplines. The Technical.
PSY 325 AID Education Expert/psy325aid.com FOR MORE CLASSES VISIT
North Atlantic LCC Science Needs and Projects Background Vision and Mission 2010 Projects (review, status, next steps) 2011 Science Needs Assessment, Workshop.
Uncertainty Analysis in Emission Inventories
Oliver Schulte Machine Learning 726
Wildlife Biology and Management
Identification of Restoration Sites for  a Fire-dependent Bird in an Urbanizing Environment Bradley A. Pickens North Carolina Cooperative Fish and Wildlife.
Bayesian data analysis
Uncertainty Analysis in Emission Inventories
Projection on Latent Variables
Chapter 11: Project Risk Management
NADSS Overview An Application of Geo-Spatial Decision Support to Agriculture Risk Management.
Propagation Algorithm in Bayesian Networks
Chapter 6 Logistic Regression: Regression with a Binary Dependent Variable Copyright © 2010 Pearson Education, Inc., publishing as Prentice-Hall.
Presentation transcript:

4. Expert Elicitations In the absence of empirical data appropriate to the proposed scope, we elicited expert knowledge to construct informed priors for logistic regressions of species responses to agricultural practices. In each state, we selected wildlife biologists with expertise in specific taxa groups (birds, reptiles, amphibians, or mammals). Working individually, the biologists: Identified the primary (by time utilizing resource) shelter and forage resource for each species in their taxa group. Scored the expected impact of each agricultural practice on each forage and shelter resource. Quantified their confidence in each score response, reflecting the level of their personal knowledge of the given practice and resource combination. The elicitation was administered in the form of an excel spreadsheet. 3. Design Workshop Producers and biologists debated and reached consensus regarding project objectives, scope, and appropriate level of biological detail for an educational tool. Producers defined common practices in field and field margin management. Biologists defined general categories of shelter and forage resources used by vertebrate wildlife species and then narrowed the list of practices to those expected to impact one or more resources. 1. Objective Develop a biodiversity metric to educate commercial row crop producers about the potential impacts of specific agricultural practices on terrestrial vertebrate species. The metric must: Be relevant to decisions made by individual producers. Support queries of the expected positive, negative, or neutral outcomes of specific actions for specific species of interest. Be grounded in science, transparent, and easily interpreted by producers. 2. Biodiversity Tool Vision 8. Conclusions Our expert-based approach allows producers to explore the biodiversity impact of production decisions in a specific field. The pathway from decision to biodiversity impact is represented as the probability of a field provisioning forage and shelter resources to individual species. The model structure allows diverse queries by producers, biologists, or other citizens. The query outcomes represent expert-based prior probabilities that are science-based, transparent, testable, and updateable. 1 Environmental Decision Analysis Team, Department of Biology, NC State University, Raleigh, North Carolina, USA 2 USGS North Carolina Cooperative Fish and Wildlife Research Unit, Department of Biology, NC State University, Raleigh, North Carolina, USA 7. Example Applications The biodiversity impact score allows producers to compare outcomes from alternative decisions in a single field, or to compare impacts of similar decisions in different fields. However, even more importantly, because the tool is built on relational databases, it is very easy to query information such as: Which species are most positively impacted? How do my decisions impact culturally important species? Are there actions I could take to benefit a particular species? Which decisions have the greatest potential impact? 5. Calculating Informed Priors Each production decision is one variable in a logistic regression predicting the probability that a field provisions a given resource. (Species are assumed to spend more time in fields which provision resources relative to those that do not.) We used a mixture model approach to translate experts’ simple impact and confidence scores to informed priors suitable for Bayesian logistic regression. For each unique decision – resource combination, we: Distributed expert uncertainty among three normal distributions. Calculated a single probability density function as the mixture of the three distributions. Used Monte Carlo estimation to obtain the mean, median, and variance values for betas in logistic regressions. Vertebrate Biodiversity in Agricultural Landscapes: Predicting Impacts of Alternative Row Crop Production Strategies C. Ashton Drew 1, Louise Alexander 1, and Jaime Collazo 2 Vertebrate Biodiversity in Agricultural Landscapes: Predicting Impacts of Alternative Row Crop Production Strategies C. Ashton Drew 1, Louise Alexander 1, and Jaime Collazo Producer identifies field of interest Tool queries Gap Analysis Program (GAP) data to identify species that potentially use the field and the immediate (120 m) margin as primary or secondary habitat Relational database matches species to primary resources (forage, day shelter, and night shelter) Producer describes practices Relational database assigns impact scores to individual species based on their assigned primary resources Tool scores individual species as more, less, or equally likely to be present (compared to a “typical” field of the same crop type) and calculates a biodiversity score as the net response of all species standardized to number of GAP species potentially present. Study Area: The pilot study focused on corn, wheat, cotton, and soy crops in portions of three states (VA, NC, SC) and three ecological regions. The model allowed “typical” farming practices and species resource preferences to differ among states and ecoregions Shelter Resources (Day & Night) N = 11 Forage Resources N = 12 Agricultural Practices N = 33 Herbaceous vegetationOmnivoreCrop choice Shrub, vine, thicket vegetation Aerial invertebratesField size Living tree canopy, bark, or cavity Herbaceous foliage invertebrates Amount of harvest residue Aquatic vegetationSoil invertebratesTillage frequency Ground burrow Aquatic invertebrates Frequency of mowing edges Buildings & bridges Tree/shrub foliage, seeds & fruits Method of herbicide application Examples of the categories defined through the design workshop to illustrate the level of detail selected to meet educational objectives. Relational database matches practices to positive, negative, or neutral impacts to primary resources In your region, as mowing frequency increases, what is the expected impact on the probability of presence of species that primarily forage on _______? +1Increase probability of presence of species using this resource 0No change in probability of presence of species using this resource - 1Decrease probability of presence of species using this resource Example of a question posed to biologists about the management of the field margins. 9. Future work Model refinement: Incorporate seasonality of resource impacts and species resource dependence. Improve statistical encoding to distinguish strong versus weak impacts. Distinguish between rare and common species. Incorporate variance and uncertainty in species resource use. Field validation: Test multi-taxa predictions in the Appalachian region of North Carolina and gather data to generate posterior estimates of beta values. Forage ResourceImpactConfidence Soil Invertebrates065% Small Animals80% 6. Relative Biodiversity Score After assigning each species to a positive, negative, or neutral impact category, based on the probability of occurrence given expected resource values, we calculated a field-level biodiversity impact score. We standardized the scores relative to the total number of species potentially present in the field. Species Impact Example Scenario (Field with 100 species) All +Most + Equal + and 0 All 0Most 0 Balan ced Equal + and - Equal – and 0 Most - All - Positive (+) Negative (-) Neutral (0) Impact Score # Positively Impacted # Negatively Impacted # Neutrally Impacted # Species 2*( ) - 2*( ) + = Biodiversity Impact Score Example of probability density functions and resulting estimates of beta for two decision – forage resource combinations. Experts’ impact and confidence scores were encoded into the prior formulation (red line) as a mixture of three normal distributions (black lines). The final predicted probability of species occurrence is a function of both shelter and forage resources, treated as independent events. Forage Resource Decision P (Forage) = β 0 + β Corn + β LeaveResidue + … P(Species | Forage,Shelter) = P(Forage) + P(Shelter) – P(Forage ∩ Shelter) Forage Resource: Small Animals Estimate of Beta Values for Decision Covariates DecisionMeanMedianVar. Corn Leave Residue Equation used to calculate impact score with examples to illustrate score range.