The power of SGD SGD overview.

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Presentation transcript:

The power of SGD

SGD overview

Accessing data

Finding S. cerevisiae homologs

Fungal genomes to BLAST Saccharomyces Candida Saccharomycetaceae Other Saccharomycetales (budding yeasts; ex: Pichia, Yarowia) Schizosaccharomyces (Fission yeasts) Dothideomycetes (Plant fungi) Chaetothyriales (black yeasts) Aspergillus Penicillium Green and blue molds (other Eurotiales) Arthrodermatacieae (dermatophytes) Other Onygenales (Coccidioides and related) Leotiomycetes (non-lichenized fungi) Glomerellales (endophytic fungi) Fusarium and related (Hypocreales) Sordariales (Neurospora and related) Other Sordariomycetidae (unitunicate perithecial fungi) Other Ascomycota Agaricomycetes (gill mushrooms and related) Tremellales (jelly fungi) Ustilaginomycotina (true smut fungi) Other Basidiomycota Microsporidia Other Fungi

Finding S. cerevisiae homolog data

High-quality, manually curated information

Reference strains sequence

Additional strains sequences

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YeastMine

S. cerevisiae to fungal homolog YeastMine tutorials:

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