Latvian Biomedical Research and Study Centre (BMC), Riga, Latvia.

Slides:



Advertisements
Similar presentations
Supplementary figure 1:
Advertisements

Genomes and Proteomes genome: complete set of genetic information in organism gene sequence contains recipe for making proteins (genotype) proteome: complete.
Protein Purification Initial Questions How much and how pure?
Human Respiratory Syncytial Virus (RSV) is the most common cause of bronchiolitis and pneumonia among infants and children, with almost everyone having.
FLUTCORE project meeting: WP3- Immunogenicity studies I-Na Lu PhD, CRP-Santé Group Leader: Prof. Dr. Claude Muller Institute of Immunology.
Expression Vector Expression of cloned genes produces large quantities of protein Components of expression vector 1. replication origin 2. polylingker.
Production of Turnip yellow mosaic virus nano-containers from Lactococcus lactis for zinc fortification Alma Laney Dr. Theo Dreher Lab Department of Microbiology.
Protein Purification and Analysis Day 4. Amino Acids, Peptides, and Proteins.
Insight into the Regulation of Dynein by Dynactin Drew Calhoun Dr. Elisar Barbar Biochemistry & Biophysics Dept.
Polymer Synthesis CHEM 421 Free Radical Polymerizations.
Affinity Chromatography Yongting Wang Jan07. What is AC? Affinity chromatography (AC) is a technique enabling purification of a biomolecule with respect.
Supervisor: Dr. David Wishart
4 September, 2006 Chapters Methods: Proteins, Model Systems I.
Solubility Rules and Precipitation Reactions. Not all ionic compounds dissolve! Instead of doing experiments all the time to see which ones will dissolve,
Overview of Bindley Bioscience Center Protein Production Lab: experimental capabilities. Contact Bindley Biosceince Center, room 222 Phone
Protein Structure. Protein Structure I Primary Structure.
Table 5-1 Protein Purification Essential for characterizing individual proteins (determining their enzymatic activities, 3D structures, etc.) Two main.
A comparison of multiple E. coli protein expression systems using orthologous plant proteins Belinda Sharpe Division of Biology Faculty of Natural Sciences.
AEX & Purification. Purification update A reproducible method for VLP purification has been developed which routinely produces material of 80% plus purity.
By: Alan Schultz & Jack Bobzien.  Our company has developed a Fab fragment product and needed the purification process verified.  Using E. Coli, propose.
Cells of E. coli bacteria Allow cells to respond to changes in their environment Only make proteins when they are needed.
Latvian Biomedical Research and Study Centre (BMC), Riga, Latvia
1234M 36 kDa Supplementary Fig. 1 Supplementary Fig. 1. Expression and purification of Bacillus sp. BRC1 Bdh in/from E. coli. Lane 1, total.
TSB Meeting 4 Hepatacore iQur Leeds Progress. Overview Introduction CoHo7e,HA1s VLP purification Cloning Yeast cell lysis Future work.
Microbial Biotechnology Philadelphia University
Construction of Plasmids & Analysis of Yeast Lysates Update.
TSB Q7 Meeting 02-Jun-2009 Hepatacore iQur Leeds Progress.
TSB Q6 Meeting 03-Mar-2009 Hepatacore iQur Leeds Progress.
IQur Limited TSB Q8 Meeting 2 nd September Agenda MW: project update & meeting schedule AET: Leeds purification MW: in vivo data LB: new constructs/EM.
Construction of Plasmids & Purification of Core-Haemagglutinin VLPs.
Confirmation of positive clones Screening of positive clones Selection of high copy number clones Selection of positive clones FLUTCORE vaccine yeast constructs.
Homotandem Core-HA (and Core-GFP) Expression in Yeast Malcolm Stratford & Hazel Steels MOLOGIC.
High-throughput Screening of Soluble Recombinant Proteins Protein Science, 2002, vol 11, YAN-PING SHIH,1 WEN-MEI KUNG,1 JUI-CHUAN CHEN, CHIA-HUI.
Methods of immunodiffusion and precipitation in gels Jana Novotná.
Taylor Bendt Faculty advisor: Dr. Gary Merrill. DNA Damage p53 DNA repairApoptosisp21 Cell cycle arrest Genome maintenance  Important for cancer prevention.
Copenhagen, 5 March 2015 Identification of the most immunogenic/protective VLP-HA construct in mice Department of Immunology Development of a universal.
Latvian Biomedical Research and Study Centre (BMC), Riga, Latvia.
FLUTCORE 6M project meeting Pampaloma April, 2016 Olotu Ogonah, Ben Blaha, Tarit Mukhopadhyay.
Latvian Biomedical Research and Study Centre (BMC), Riga, Latvia.
Protein Overexpression in E. coli and
Cloning and development of constructs. Cloning overview Construct design Cloning into pPICZ plasmid (bacteria) Yeast cloning (P. pastoris KM71H) Determination.
Purification Development. Tech-transfer run of VLP 1 performed UCL/iQur with 3P.
Figure S1. Production of recombinant NS1 protein
Sesha Kiran Kollipara, Vikas Solanki and Bikash Mandal
KM71H pHe7 LAHH3,K1 3P g VLP prep II Bradford assay
Supplemental Figure S1: Appearance of sucrose gradients for isolation of the Chl-protein complexes from cells grown in Fe-replete (Fe+) or Fe-depleted.
Flutcore meeting 11/4/2016 by Alex Ramirez PhD.
OVEREXPRESSION OF TRUNCATED ARA H2
Target protein Additional file 3. SDS-PAGE showing the degree of purification of D1-26PtxtPL1-27 expressed in E. coli. PtxtPL1-27.
Tandem scfv production Because of its high binding capability and easy production character, tandem scFv-Fc bispecific antibody (BsAb) is one of the leading.
Tandem scfv production Because of its high binding capability and easy production character, tandem scFv-Fc bispecific antibody (BsAb) is one of the leading.
VWF73, a region from D1596 to R1668 of von Willebrand factor, provides a minimal substrate for ADAMTS-13 by Koichi Kokame, Masanori Matsumoto, Yoshihiro.
Human osteoarthritis synovial fluid and joint cartilage contain both aggrecanase- and matrix metalloproteinase-generated aggrecan fragments  A. Struglics,
Volume 14, Issue 9, Pages (September 2007)
Hours after rec PR-Set7 release Ladder kDa 15 PR-Set7 Coomassie
Expression of Indoleamine 2,3-Dioxygenase in Dermal Fibroblasts Functions as a Local Immunosuppressive Factor  Yunyuan Li, Edward E. Tredget, Ruhangiz.
Volume 7, Issue 11, Pages (November 2000)
Vaccination against IL-31 for the treatment of atopic dermatitis in dogs  Martin F. Bachmann, PhD, Andris Zeltins, PhD, Gints Kalnins, Dr med vet, Ina.
Purification of chromogranin B from over-expressing insect sf9 cells.
Volume 20, Issue 11, Pages (November 2012)
Volume 16, Issue 3, Pages (March 2008)
The Relationship of MHC-Peptide Binding and T Cell Activation Probed Using Chemically Defined MHC Class II Oligomers  Jennifer R Cochran, Thomas O Cameron,
Volume 21, Issue 9, Pages (September 2013)
Volume 17, Issue 4, Pages (April 2010)
Full-length TAPL interacts specifically with LAMP-1 and LAMP-2.
Volume 16, Issue 16, Pages (August 2006)
Molecular Therapy - Methods & Clinical Development
Volume 96, Issue 3, Pages (February 2009)
The Relationship of MHC-Peptide Binding and T Cell Activation Probed Using Chemically Defined MHC Class II Oligomers  Jennifer R Cochran, Thomas O Cameron,
Design and purification of CS1-NKG2D biAb by metal-affinity chromatography. Design and purification of CS1-NKG2D biAb by metal-affinity chromatography.
Presentation transcript:

Latvian Biomedical Research and Study Centre (BMC), Riga, Latvia

Testing of HA stalk constructs Report summary Testing of M2e constructs Evaluation of long homodimer constructs Evaluation of new M2e constructs Testing of K1K1 construct Evaluation of new HA stalk constructs

Comparison of CoHe constructs carrying different HA stalk fragments WP1 - part I - tandem core NoConstruct Mw, kDa 1pET coHe7HA1( ), empty46.8 2pET coHe7HA2( ), empty52.3 3pET coHe7HA3( ), empty50.2 4pET coHe7LAH( ), empty49.4 5pET coHe7∆HAStalk,empty77.9 6pET coHe7empty, Headless HA78.0 7pET coHe7empty, HA2( )52.4 8pET coHe7empty, HA4( )~55.0 9pET coHe7empty, LAH( )49.5 All except No5 and No6 produces product of corresponding Mw

Solubility of recombinant HBc-HA proteins At least part of protein is in soluble fraction No5 is insoluble. No6 is degraded No detectable immunodiffusion bands, except No6 WP1 - part I - tandem core

Synthesis and solubility of recombinant HBc-M2e proteins Minor part of protein is in soluble fraction No detectable immunodiffusion bands, except No5; confirmed VLP formation NoConstruct 1pETcoHe7e,M2eSP 2pETcoHe7e,M2e C19S 3pETcoHe7e,M2e C17,19S 4pETcoHe7e,M2e C17,19S SP 5pETcoHe7(M2e C17,19S ) 3 SP WP1 - part I - tandem core

Purification of KM71H pHe7 K1,K1 (codon-optimized) from P.pastoris Immunodiffusion (+) Survives AmS precipitation Confirmed VLP formation WP1 - part I - tandem core

Testing of HA stalk constructs Testing of M2e constructs Evaluation of long homodimer constructs Evaluation of new M2e constructs Testing of K1K1 construct Evaluation of new HA stalk constructs WP1 - part II – single gene expression

Evaluation of new M2e constructs WP1 - part II – single gene expression G 4 SG 4 SLLTEVETPIRNEWGCRCNDSSD TEVETPIRNEWGSRSNDSSD

Evaluation of new M2e constructs WP1 - part II – single gene expression TEVETPIRNEWGSRSNDSSD SLLTEVETPIRNEWGSRSNDSSD tº treatmentAmS precipitationS500 chromatography VLPs for immunization?

Evaluation of new HA stalk constructs WP1 - part II – single gene expression HA2.3 ( ) as the most prospective immunologically No VLPs detected by expression in tandem core Chemical coupling as a backup strategy linker M2e HA3 HA2.3 needed for coupling as a single protein K

Expression and purification of HA2.3 as a single protein WP1 - part II – single gene expression HA3 - Cys MBP TEV 6His 1. Expression 3-4. TEV cleavage 2. Ni-affinity AEC HA2.3 trimer? SEC profile aggregates and VLPs HA3 monomer

Expression and purification of HBc176_K1 VLPs WP1 - part II – single gene expression G 4 SG 4 SGGS K GGSG 4 SG 4 S tº treatmentAmS precipitationS500 chromatography

Chemical coupling of HA2.3 to HBc_K1 VLPs WP1 - part II – single gene expression -NH 2 + HS- -NH S- Sulfo-KMUS +

Design of long homodimer construct WP1 - part II GGSx1→GGSx3→GGSx5 No detectable expression in E. coli GGSx6→GGSx9 Constructs in progress linker M2e HA2.3 K

Our group Dr.biol. Tatjana Voronkova Inara Akopjana Dr.biol. Kaspars Tars Dr.biol. Andris Kazaks Svetlana Kotelovica Special thanks for electron microscopy pictures: Dr. Velta Ose