The Naturalist Fredrik Ronquist Swedish Museum of Natural History.

Slides:



Advertisements
Similar presentations
1 Technology in the Common Core State Standards Perri Applegate, Ph.D. Tulsa Public Schools
Advertisements

Preserving and Disseminating Asian Cultures with the Digital Library Technologies by Dawei Wei.
W.Koch: REGNET; 10/19991 Creation of digital goods (domain: Cultural Heritage, including libraries, museums, archives, galleries, etc) with emphasis on.
Cultural Heritage in REGional NETworks REGNET WP2: Implementation of the System and Preparation of Services and Product Generation Structure and deliverables.
DRIVER Step One towards a Pan-European Digital Repository Infrastructure Norbert Lossau Bielefeld University, Germany Scientific coordinator of the Project.
Seminar on E-Publishing & Global Promotion of Indian Journals, 1 st July 2006, Mumbai. Role of NIC in Global Promotion of Indian Biomedical Journals Sukhdev.
Perri Applegate, Ph.D. Tulsa Public Schools
- Identifying in the fields - Assessing the forest biodiversity e Flora: BIOTIK applied to smartphones and tablets for forest field surveys Dr Pierre Grard.
Environmentally Sustainable Australia Atlas of Living Australia presentation to Environmentally Sustainable Australia Expert Working Group Donald Hobern,
V Alyssa Rosemartin 1, Lee Marsh 1, Ellen Denny 1, Bruce Wilson USA National Phenology Network, Tucson, AZ; 2 - Oak Ridge National Laboratory, Oak.
Pensoft Writing Tool (PWT) Lyubomir Penev ViBRANT Tools for DNA taxonomists, 11 June 2013, Brussles ViBRANT.
Cultural Content and Digital Heritage Bernard Smith European Commission INFSO/D2.
Sandra McIntyre Program Director. OVERVIEW Analysis.
Publish or perish? Linking Scratchpads and the new Biodiversity Data Journal for streamlining publication of botanical data D.N Koureas 1, L. Penev 2 &
Galia Angelova Institute for Parallel Processing, Bulgarian Academy of Sciences Visualisation and Semantic Structuring of Content (some.
EU BON citizen science gateway Veljo Runnel University of Tartu Natural History Museum.
OpenUp! A New Project on Opening up the European Natural History Heritage for EUROPEANA W. G. Berendsohn, A. K. Michel, A. Güntsch, W.-H. Kusber (2011)
Teula Morgan The Adaptable Repository: Swinburne Online Journals.
Scotland’s Environment Web Aims to be the “Trusted” gateway to everything you want to know.
ACCESS TO QUALITY RESOURCES ON RUSSIA Tanja Pursiainen, University of Helsinki, Aleksanteri institute. EVA 2004 Moscow, 29 November 2004.
Building Sustainable Biodiversity Information Systems Fredrik Ronquist Dept. Bioinformatics and Genetics Swedish Museum of Natural History.
The Austrian Adaptation Platform Sabine McCallum, 19 June 2013.
History–Social Science: Learning Experience 5. wested
Fourth Annual Summit | Feb | Tucson, AZ Scratchpads for community involvement for natural history collections Dr Dimitris Koureas Biodiversity.
Chinese-European Workshop on Digital Preservation, Beijing July 14 – Network of Expertise in Digital Preservation 1 Trusted Digital Repositories,
SoE Reporting in Scotland Scotland’s Environment Web LIFE Project Joanna Muse Principal.
Serenate1 Non-standard users: The Library Raf Dekeyser K.U.Leuven.
Scratchpads Publication Module - A paradigm shift in publishing RBG Kew, Seminar,
Resource Identification for a Biological Collection Information Service in Europe An introduction to the BioCISE project Walter G. Berendsohn Botanical.
SERVIR-AFRICA: an overview André Kooiman International workshop on higher resolution Land cover mapping for the African continent UNEP, 27 June 2013.
THE SCIENCETHE SEARCHTHE SOLUTION New Publishing Paradigms and their impact on a not-for- profit organisation Shaun Hobbs Database.
Credo Reference: The Online Reference Service for Learners and Librarians ABE, February 2011.
The Pensoft Journal System and XML-based workflow Lyubomir Penev Life and Literature Conference, Chicago 2011 ViBRANT Virtual Biodversity.
Collecting Fishes for Science An African View. Ethics Common sense – health and safety Collections and ‘Bioprospecting’ Biodiversity Informatics – “knowledge.
COINE Cultural Objects in Networked Environments.
Training course on biodiversity data publishing and fitness-for-use in the GBIF Network, 2011 edition How Darwin Core Archives have changed the landscape.
The role of Parthenos for CLARIN ERIC Steven Krauwer CLARIN ERIC Executive Director 1.
Animal Species Database of China JI, Li-Qiang Institute of Zoology, CAS Beijing, China CODATA, 2006, Beijing.
Dimitris Koureas, PhD Natural History Museum London Linking layers of biodiversity data: Informatics challenges for the long tail research RDA - Long Tail.
EUscreen: Examining An Aggregator ’ s Role in Digital Preservation Samantha Losben Digital Preservation - Final Project December 15, 2010.
Metadata and Geographical Information Systems Adrian Moss KINDS project, Manchester Metropolitan University, UK
Themes Architecture Content Metadata Interoperability Standards Knowledge Organisation Systems Use and Users Legal and Economic Issues The Future.
Extensible Markup Language (XML) Extensible Markup Language (XML) is a simple, very flexible text format derived from SGML (ISO 8879).ISO 8879 XML is a.
A curation interface for reconciliation of species names for India. Thomas Vattakaven and R. Prabhakar, India Biodiversity Portal, Strand Life Sciences,
Scratchpads The virtual research environment for biodiversity data Simon Rycroft, Dave Roberts, Vince Smith, Alice Heaton, Katherine Bouton, Laurence Livermore,
DATABASES Southern Region CEO Wednesday 13 th October 2010.
Encyclopedia of Life Established May 2007 First version of portal went online Feb year goals –Assemble infinitely expandable web pages for all.
An Introduction to Scratchpads: Making your data work for you Laurence Livermore Natural History Museum, London Joinville, Brazil.
African Studies Research Guide By: Kelly O’Brien Core Databases Key Journals Key Data Sources Print ReferenceSubject Headings Websites African Studies.
Tuesday, April 5th, 2005 N. Craig, B. J. Méndez (SEGway,UC Berkeley) R. J. Hanisch, C. A. Christian, F. Summers (NVO,StScI) B. Haisch, J. Lindblom (ManyOne.
National Library of the Czech Republic Integration of digital materials into EDL Adolf Knoll National Library of the Czech Republic Helsinki CENL Workshop.
Serenate1 The librarian’s view Raf Dekeyser K.U.Leuven.
Taxonomic Workflow in the EDIT Platform for Cybertaxonomy Andreas Kohlbecker, Pepe Ciardelli, Niels Hoffmann, Katja Luther, Andreas Müller Botanic Garden.
Sharing Digital Scores: Will the Open Archives Initiative Protocol for Metadata Harvesting Provide the Key? Constance Mayer, Harvard University Peter Munstedt,
Riccardi: DIALOGUE Workshop August 1, 2005 Supported by NSF BDI 1 Representing and Using Phylogenetic Characters in Morphbank Greg Riccardi, David Gaitros,
IABIN Species and Specimens Thematic Network (SSTN) IABIN Executive Committee/Coordinating Institution Meeting. Tierras Enamoradas, Costa Rica. February.
Scratchpads An online platform for biodiversity data Laurence Livermore Biodiversity Informatics | Department of Life Sciences Natural History Museum London.
The Earth Information Exchange. Portal Structure Portal Functions/Capabilities Portal Content ESIP Portal and Geospatial One-Stop ESIP Portal and NOAA.
Centre for Environmental Data and Recording - CEDaR Established in 1995 to collect, collate and disseminate all biodiversity and geodiversity records for.
GBIF Governing Board 20 Module 6B: New GBIF Tools II 2013 Portal and NPT Startup Daniel Amariles IT Leader, National Biodiversity Information System of.
Thematic priorities Life sciences, genomics and biotechnology for health Nanotechnology Aeronautics Food quality and safety Sustainable development, global.
Coordination and Policy Development in Preparation for a European Open Biodiversity Knowledge Management System Supported by the European Commission through.
Sample-based data publication; reflections on semantics and logic 1(1) Hanna - GBIF Finland Lepidoptera collection of Hannu SaarenmaaPublicNo (but DwC.
GB22 TRAINING EVENT FOR NODES – 4 OCTOBER 2015 Session 02: 2015 Data Publishing Landscape Laura Russell.
E-Business Infrastructure PRESENTED BY IKA NOVITA DEWI, MCS.
The IPT user interface and data quality tools
Cataloging the Internet
Trust and Culture on the Web
LifeWatch Cloud Computing Workshop
Presentation transcript:

The Naturalist Fredrik Ronquist Swedish Museum of Natural History

The Naturalist Species/taxon information system for citizen scientists, school children, students, general public, decision makers Give an overview of Baltoscandian biodiversity data Providing help in learning, exploring and identifying biodiversity Entry point into more advanced resources Improve quality of citizen-science biodiversity observations Available in four languages (English, Estonian, Finnish, Swedish) Includes all species occurring in the Nordic-Baltic region Core is structured text and carefully chosen multimedia Texts and media content follow international standard (SPM): exchange content with neighboring countries offer content to external projects, e.g. Encyclopedia of Life Dynamically generated content: integrated Nordic-Baltic distribution maps links to biodiversity data systems in all countries in the region links to biodiversity reporting systems in the region maps and links presented even when text and media are missing

The Naturalist (cont ’ d) Content from all partners, including: Orthoptera (grasshoppers) Odonata (dragonflies) Coleoptera (beetles) Fresh water bivalves Invasive species Vascular plants Fossils (in linked system Paleobiodiversity in Baltoscandia) In numbers: Complete text and multimedia for about 4,000 species (7 % of flora and fauna) Baltoscandian maps for 30,000 species based on 50 M data records (50 % of flora and fauna) At least name, classification and links for 55,000 species (90 % of flora and fauna) Infrastructure work draws from a number of existing projects, including: Estonian NATARC (Natural history archives and information network) Finnish Biodiversity Information Facility Swedish Lifewatch DINA-Specify open collection software consortium (

Taxon pages Multimedia repository Literature and references Taxonomy, vernacular names, taxon concepts Taxon occurrence data warehouse Users Helsinki Tartu Tartu ? External system taxon pages Other partners Sthlm/Helsinki Sthlm ? Sthlm DwC/BDIP Map protocol SPM TCS/BDIP OAI- PMH/BDIP External system users SEEEFI Biodiversity data providers Modular approach makes distributed development efficient Tartu

Nationalnyckeln National popular-science biodiversity encyclopedia in Swedish Produced by Artdatabanken (Swedish Species Information Centre in Uppsala) as part of the Swedish Taxonomy Initiative 15 volumes published in ten years, covering species Book publication will be replaced by digital keys integrated with Artportalen (the Species Gateway) and taxon information in Naturforskaren

Strengths of The Naturalist Cost efficient: Only texts and media have to be uploaded manually Content can be exchanged between neighboring countries, texts possibly auto- translated Less than 20 % of cost of book production per species (Nationalnyckeln) Better navigation than book presentations: Simple search from everywhere Links to look-alikes, host plants etc Links to taxa from identification keys Dynamic maps Always up to date User can interact with the maps... but limited by data quality (historical data still lacking; potential problems like uncertain data points and reporting bias not accounted for) Better entry into other web resources Automatically generated links directly to appropriate species/higher taxon Customized links for each organism group, each country

Strengths of The Naturalist Better identification and learning help, generated automatically Comparative ‘ plates ’ of media for underlying taxa User-based comparison based on ‘ shopping cart ’ User-generated quizzes Report observations directly from the system Automatic linking of terms in descriptions to definitions (ontologies) Puts Baltoscandia at the forefront in Europe (and the world) with respect to citizen-science platforms Benefits to society: Increased environmental awareness Improved life quality Engaged citizens Better informed decision makers Better understanding of the transboundary nature of biodiversity (and of human culture and science...)

The Naturalist (Naturforskaren)