Covariation in Productivity of Mid-Columbia Steelhead Populations S.P. Cramer & Associates, Inc. 600 N.W. Fariss Road Gresham, OR 97030 www.spcramer.com.

Slides:



Advertisements
Similar presentations
RTT Analysis Workshop Species Status and Trend (Chapter 1) Casey Baldwin RTT Chairperson WDFW Research Scientist.
Advertisements

COMPARATIVE SURVIVAL STUDY (CSS) of PIT-tagged Spring/Summer Chinook and PIT-tagged Summer Steelhead CBFWA Implementation Review Mainstem/Systemwide.
Interior Columbia Basin TRT Draft Viability Criteria June, 2005 ESU & Population Levels.
Chinook Salmon Adult Abundance Monitoring Paul Kucera and Dave Faurot Nez Perce Tribe Department of Fisheries Resources Management BPA Project
Assessment of A-run Steelhead population in the Clearwater Nez Perce Tribe Department of Fisheries Resources Management.
Lower Snake River Compensation Plan Hatchery Evaluations – Salmon River Project No Nez Perce Tribe Department of Fisheries Resources Management.
Salmonid Population and Habitat Monitoring in the Lower Columbia/Columbia Estuary Provinces Oregon Department of Fish and Wildlife.
Frank Leonetti, Snohomish County
Supplementation with local, natural-origin broodstock may minimize negative fitness impacts in the wild Initial results of this study were published in.
Backtesting of Stochastic Mortality Models: Kevin Dowd (CRIS, NUBS) Andrew J. G. Cairns (Heriot-Watt) David Blake (Pensions Institute, Cass Business School)
Modeling fisheries and stocks spatially for Pacific Northwest Chinook salmon Rishi Sharma, CRITFC Henry Yuen, USFWS Mark Maunder, IATTC.
National Marine Fisheries Service Steelhead Viability Analysis: Addressing Life History Variability Tom Cooney (NWFSC) March 14, 2012.
Examining the interaction of density dependence and stochastic dispersal over several life history scenarios Heather Berkley Bruce Kendall David Siegel.
Population viability analysis of Snake River chinook: What do we learn by including climate variability? Rich Zabel NOAA Fisheries Seattle, WA.
Recruitment success and variability in marine fish populations: Does age-truncation matter? Sarah Ann Siedlak 1, John Wiedenmann 2 1 University of Miami,
Variation in Straying Patterns and Rates of Snake River Hatchery Steelhead Stocks in the Deschutes River Basin, Oregon Richard W. Carmichael and Tim Hoffnagle.
Columbia River salmon : Who (or what) will save them? John Williams Klarälven meeting in Karlstad 9 May 2011.
1 Spatial and Spatio-temporal modeling of the abundance of spawning coho salmon on the Oregon coast R Ruben Smith Don L. Stevens Jr. September.
Stochastic Population Modelling QSCI/ Fish 454. Stochastic vs. deterministic So far, all models we’ve explored have been “deterministic” – Their behavior.
FISH POPULATION DYNAMICS
Revisiting Stock-Recruitment Relationships Rainer Froese Mini-workshop on Fisheries: Ecology, Economics and Policy CAU, Kiel, Germany.
Integrated Status & Trend (ISTM) Project: An overview of establishing, evaluating and modifying monitoring priorities for LCR Steelhead Jeff Rodgers (ODFW)
Population Biology: PVA & Assessment Mon. Mar. 14
Klamath Coho Integrated Modeling Framework (IMF)
Kevin Kappenman Rishi Sharma Shawn Narum Benefit-Risk Analysis of White Sturgeon in the Lower Snake River Molly Webb Selina Heppell.
Steelhead Stock Status Review and ESA Oregon Rhine Messmer ODFW District Staff Oregon Department of Fish and Wildlife Pacific Coast Steelhead Management.
Life History of Western Washington Winter Steelhead, a 30 Year Perspective Hal Michael Washington Department of Fish and Wildlife
Modeling physical environmental impacts on survival: the SHIRAZ model Ecosystem based management FISH 507.
Photo by John McMillan Spawning habitat Winter rearing Summer rearing Smolt Carrying Capacity.
Steelhead and Snow Linkages to Climate Change ?. Recruitment Curves Fact or Fiction?
The Status of Puget Sound Chinook Salmon What do we know? and How do we know it? Kit Rawson Tulalip Tribes.
Status of Columbia River salmon and links to flow: What we do and do not know Presentation to Northwest Power Planning Council December 11, 2002
Effectiveness of alternative broodstock, rearing and release practices at Winthrop NFH William Gale and Matt Cooper -USFWS, Mid-Columbia River Fishery.
Chinook Salmon Supplementation in the Imnaha River Basin- A Comparative Look at Changes in Abundance and Productivity Chinook Salmon Supplementation in.
Howard Schaller PSMFC Annual Meeting September 24, 2013 Comparative Survival Study Outcomes – Experimental Spill Management 1.
CSS Oversight Committee ISAB November 15, 2013 Comparative Survival Study Outcomes – Experimental Spill Management 1.
Steelhead Kelt Reconditioning Program Update Presented by: Bill Bosch, Yakama Fisheries Acknowledgements: D. Fast, M. Johnston, T. Newsome Prosser Hatchery.
1)In order to determine if any project or regulation fails or succeeds it is it is important that it had quantifiable and measurable (fill in the line.
2004 Oregon Steelhead Status Update Steve Jacobs Oregon Department of Fish and Wildlife.
The relationship of Snake River stream-type Chinook survival rates to in-river, ocean and climate conditions Howard Schaller, USFWS * Charlie Petrosky,
Oregon Steelhead Status, Recovery Planning and Monitoring Kevin Goodson Oregon Department of Fish and Wildlife Pacific Coast Steelhead Management Meeting.
Washington State Steelhead Stock Status Review PACIFIC COAST STEELHEAD MEETING AMILEE WILSON WASHINGTON DEPARTMENT OF FISH & WILDLIFE MARCH 2004.
The influence of variable marine survival on fishery management objectives for wild steelhead Dan Rawding & Charlie Cochran.
Comparison of Winter Steelhead Trap Estimates in Small Basins to Other Escapement Methods and the Representativeness of ODFW Life-Cycle Monitoring Sites.
Comparing Current and Desired Status: Gaps Analysis Brief overview: ICTRT Viability Criteria Abundance/Productivity Gaps: Concepts and Calculations Considering.
Wildlife, Fisheries and Endangered Species
1 Independent Scientific Advisory Board June 12, 2003 A Review of Salmon and Steelhead Supplementation.
Estimating Viable Salmonid Population Parameters for Snake River Steelhead using Genetic Stock Identification of Adult Mixtures at Lower Granite Dam Tim.
Yakima O. mykiss Modeling Workshop Ian Courter Casey Justice Steve Cramer.
Steve Cramer Casey Justice Ian Courter Environmental drivers of steelhead abundance in partially anadromous Oncorhynchus mykiss populations.
Biodiversity of Fishes Stock-Recruitment Relationships
Using distributions of likelihoods to diagnose parameter misspecification of integrated stock assessment models Jiangfeng Zhu * Shanghai Ocean University,
Oncorhynchus mykiss : The Quandary of a Highly Polymorphic Species under the U.S. Endangered Species Act by: Kathryn Kostow Oregon Department of Fish and.
CAN DIAGNOSTIC TESTS HELP IDENTIFY WHAT MODEL STRUCTURE IS MISSPECIFIED? Felipe Carvalho 1, Mark N. Maunder 2,3, Yi-Jay Chang 1, Kevin R. Piner 4, Andre.
Incorporation of Climate-Ocean Information in Short- and Medium Term Sprat Predictions in the Baltic Sea Acknowledgements: ICES Baltic Fish. Assess. WG.
Upstream passage success rates and straying of returning adults Presenter: Jack Tuomikoski CSS Annual Meeting Apr 2 nd 2010.
Technical Memo #1 Estimation of Returns of Naturally Produced Coho to the Klamath River Cramer Fish Sciences Nicklaus K. Ackerman Brian Pyper Ian Courter.
Empirical comparison of historical data and age- structured assessment models for Prince William Sound and Sitka Sound Pacific herring Peter-John F. Hulson,
Analyses of intervention effects Mark Scheuerell & Eli Holmes FISH 507 – Applied Time Series Analysis 5 March 2015.
Potential Effects of Mark-Selective Fisheries on Central Valley Salmon Brian Pyper and Steve Cramer Cramer Fish Sciences.
Lecture 17: Multi-stage models with MARSS, etc. Multivariate time series with MARSS We’ve largely worked with: 1. Different time series of the same species.
Salmon and Steelhead Conservation through adaptive management of water levels in the Jenner estuary NOAA’S National Marine Fisheries Service.
Sardine Two-Stock Hypothesis: Results at the Posterior Mode
Status of Washington Steelhead 2006
Yakima River Steelhead Status and Trends RM&E Project Overview:
Steelhead Viability: Where are we now and where are we going?
Current developments on steepness for tunas:
YKFP Spring Chinook Supplementation Assessment
On Recruitment of Steelhead in Mid Columbia Subbasins
Columbia Basin Coordinated Anadromous Monitoring Strategy Workshop
Presentation transcript:

Covariation in Productivity of Mid-Columbia Steelhead Populations S.P. Cramer & Associates, Inc. 600 N.W. Fariss Road Gresham, OR Brian Pyper & Steve Cramer

Mid – Columbia Study Area

Background »Population abundance »Population growth rate (productivity) »Spatial structure »Diversity Mid-Columbia steelhead ESU listed as threatened NMFS uses four measures to evaluate viable salmonid populations (McElhany et al. 2000):

Background “Lambda” analysis a key tool used by NMFS to assess productivity (Homes 2001; McClure et al. 2003) “Lambda” measures population growth rate and extinction risk using time series of escapement data (increasing or decreasing trend?) Model is not mechanistic Assumes no density dependence in spawner-recruit dynamics

Spawner-recruit analysis Examined spawner-recruit data for 8 populations (Cramer et al. 2005) Estimated intrinsic growth rates and capacity Compared 4 spawner-recruit models: »Density independent model »Ricker model »Beverton-Holt model »Hockey-stick model Used simulations to examine potential bias

Data Dam counts of natural-origin spawners : »Deschutes »Yakima »Umatilla Redd counts (index) for 5 John Day subpopulations: »Upper and Lower Mainstem »South, Middle, and North Forks Recruitment indices based on available harvest and age- structure data

Population abundance of natural-origin steelhead in the Middle Columbia ESU,

Covariation in recruitment Escapement indices correlated (Avg. r = 0.63) Suggests shared influence of freshwater or marine conditions on survival Suggests limited measurement error Next step: Fit spawner-recruit models …

DI RK 1:1 BH HS Spawner Index Recruit Index Fits of the spawner-recruit models to the North Fork data set of the John Day population (DI = density-independent model, RK = Ricker model, HS = logistic hockey-stick model, and BH = Beverton-Holt model).

Model comparisons Used the AIC model-selection criterion Beverton-Holt and Hockey-stick models “best” across data sets But many unstable fits and unreasonably high estimates of intrinsic growth rate (alpha) Range in Alpha (Recruits per spawner) Beverton-Holt:5.5 to 72.9 Hockey-stick:2.4 to 20.8 Ricker:2.6 to 5.2

Model comparisons Ricker model stable with biologically reasonable estimates of growth rate (alpha) Ricker fits much better than Density- Independent model for all 8 data sets Note: Estimates of capacity similar across forms (Ricker, Beverton-Holt, Hockey-stick) Density Independent model assumes no limit to capacity

Fits of the Ricker and Density-independent models JD North Fork Deschutes Umatillla Yakima Spawner Index Recruit Index

JD Upper Mainstem JD Lower Mainstem JD South Fork JD Middle Fork Spawner Index Recruit Index Fits of the Ricker and Density-independent models

Ricker estimates of intrinsic growth rate (alpha) Average = 3.4 recruits per spawner Upper Mainstem Lower Mainstem South Fork Middle Fork North Fork DeschutesUmatilllaYakima Ricker Alpha (Recruits/Spawner) `

Ricker estimates of intrinsic growth rate (alpha) Average = 3.4 recruits per spawner Upper Mainstem Lower Mainstem South Fork Middle Fork North Fork DeschutesUmatilllaYakima Ricker Alpha (Recruits/Spawner) ` Ricker Average for Density- Independent models = 1.4 Recruits/Spawner

Ricker estimates of capacity: unfished equilibrium spawner abundance (S*) 0 2,000 4,000 6,000 8,000 10,000 DeschutesUmatilllaYakima Ricker S* ` Spawner Abundance

Ricker estimates of capacity: unfished equilibrium spawner abundance (S*) 0 2,000 4,000 6,000 8,000 10,000 DeschutesUmatilllaYakima Recent 5-yr geometric mean Ricker S* ` Spawner Abundance

Ricker estimates of capacity: John Day Upper Mainstem Lower Mainstem South ForkMiddle ForkNorth Fork Recent 5-yr geometric mean Ricker S* Redds per Mile

JD Upper Mainstem JD Lower Mainstem JD South Fork JD Middle Fork Spawner Index Recruit Index Influence of 1985 – 1988 brood years: Density dependence or poor ocean survival?

Removed years and re-fit Ricker models Similar results – still get strong evidence of density dependence (P < 0.01) for 8 data sets Consistent estimates of growth rate (alpha) Influence of 1985 – 1988 brood years

Combined data (spawner index standardized so median = 1 for each data set)

Combined data (spawner index standardized so median = 1 for each data set)

Possible bias in Ricker parameters related to: »Short data sets »Measurement errors »Autocorrelation »Harvest rates Estimates of parameters uncertain Strong concern for NMFS (McElhany et al. 2000) Can use simulations to assess potential bias Potential problems with spawner-recruit analyses

Simulated spawner-recruit data with same characteristics as Mid-Columbia data »True alpha = 3 »High autocorrelation »Low harvest rates Assumed measurement error in age structure and escapement estimates (CV = 30%) Estimated Ricker parameters for each simulated data set to assess potential bias Simulations

Results (500 simulations) Estimate of Ricker alpha Number of Simulations True value = 3.0 Median estimate = 3.2

Bias in Ricker parameters was minimal (10 to 20%) for range of conditions typical of Mid- Columbia steelhead data sets Primary reason was low harvest rates (20% across most years) Significant bias expected for harvest rates = 40% or greater across years Simulations results

Widespread evidence of density dependence in Mid-Columbia steelhead data sets Consistent estimates of intrinsic growth rates (avg. = 3.4 recruits per spawner) No evidence that one or more populations experienced relatively poor productivity “Lambda” only useful as a red-flag indicator Intrinsic growth rates suggest resilience to short-term increases in mortality Summary