Experimental  Applied Biosystems Voyager DE-STR+ MALDI-TOF MS  N2 laser (3 nsec pulse, λ = 337 nm)  Laser intensity 2104, 96% grid voltage, 100 nsec.

Slides:



Advertisements
Similar presentations
Mass Spectrometry Kyle Chau and Andrew Gioe. Computation of Molecular Mass -Mass Spectrum is a plot of intensity as a function of mass- charge ratio,
Advertisements

Materials Feasibility for Laser Processing CO2 Laser(10.6 µm): Materials Feasibility 1. Organic Materials: Polymers (Plastics), Wood Based Products 2.
12-1 Molecular Mass Spectroscopy Molecular structure Composition of mixtures Molecular mass spectra Ion Source Mass Spectrometers Applications.
Evaluation of Peptides in Wisconsin Beer Mckenna L. Missfeldt, Dr. Jennifer Grant, University of Wisconsin-Stout Abstract Matrix-assisted laser desorption/ionization.
Sample spotting techniques Dried droplet Crushed crystal Thin layer Sandwich.
Results References [1].Mendoza, J. D. Lab 3: FTIR, Iowa State University [2] National Institute of Science and Technology, Polyethylene Glycol, 2009 [3]
Introduction to MALDI-TOF MS
Analyzing Biological and Organic Polymers by MALDI-TOF Jonathan A. Karty, Ph.D.
Laser Desorption Ionization Mass Spectrometry of Ink Katie Axwik Jory Schlitt Broc Glover.
Lecture 9. MALDI/TOF. Introduction Matrix-assisted laser desorption/ionization (MALDI) is a soft ionization technique used in mass spectrometry, allowing.
Analytical strategy for the microstructural characterization of MAA-MMA copolymers Rémi Giordanengo, (1) Stéphane Viel, (1) Manuel Hidalgo, (2) Béatrice.
MALDI MS Imaging on the 4800 MALDI TOF/TOF™ Analyzer Prepared by Andrew James, PhD.
Degradation of Polymers Long Lor Chem 4101 Fall 2010 December 13, 2010.
Ionization and Mass Analyzers Ionizations –Electron Ionization - “hard” –Chemical Ionization - “soft” –MALDI - desorption –FAB - desorption –Laser Post.
Modern techniques for structure determination of organic compounds include: Mass spectrometry Size and formula of the compound Infrared spectroscopy Functional.
PROTEIN IDENTIFICATION BY MASS SPECTROMETRY. OBJECTIVES To become familiar with matrix assisted laser desorption ionization-time of flight mass spectrometry.
Terahertz Conductivity of Silver Nanoparticles Abstract: The electrical conductivity for bulk metal is described by the well-known Drude model. As the.
Methylation of acidic moieties to enable characterization in MAA based copolymer Rémi Giordanengo, (1) Stéphane Viel, (1) Manuel Hidalgo, (2) Béatrice.
Platzhalter für Bild, Bild auf Titelfolie hinter das Logo einsetzen Sheetal Gangula, Institute of Food chemistry Quantitative analysis of complex oligomeric.
Comparison of chicken light and dark meat using LC MALDI-TOF mass spectrometry as a model system for biomarker discovery WP 651 Jie Du; Stephen J. Hattan.
12. Structure Determination: Mass Spectrometry and Infrared Spectroscopy Based on McMurry’s Organic Chemistry, 7th edition.
Introduction Recent research has proposed rapid and robust identification of intact microorganisms using matrix assisted laser desorption/ ionization time-of-flight.
Abstract Conclusions References  The intent of this presentation is to address the usage of nanomanipulation-coupled with nanospray mass spectrometry.
Gaucher’s Disease – A glycolipid storage disorder characterized by the accumulation of glucosylceramide in the spleen, liver, lungs, bone marrow and brain.
Tissue Imaging by 5 kHz High-Performance MALDI-TOF Poster Number TP191 Christina Vestal 1, Kenneth Parker 1, Kevin Hayden 1, George Mills 1, Marvin Vestal.
Mass Spectrometry I Basic Data Processing. Mass spectrometry A mass spectrometer measures molecular masses. The mass unit is called dalton, which is 1/12.
INF380 - Proteomics-61 INF380 – Proteomics Chapter 6 – Mass Spectrometry – MALDI TOF The MALDI-TOF instruments are the simplest MS instruments suitable.
Based on ionization of gas phase molecule followed by analysis of the masses of the ions produced. The Mass Spectrum: Graph of ion intensity versus mass-to-charge.
-Aluminum housing with o-ring seal allows for washing (salt removal), plate cleaning and regeneration enabling for multiple use -Sample elution for MS.
Marvin Vestal and Kevin Hayden SimulTOF Systems
Analysis of Biomolecules through Nanomaterials Based Mass Spectrometry
MS Calibration for Protein Profiles We need calibration for –Accurate mass value Mass error: (Measured Mass – Theoretical Mass) X 10 6 ppm Theoretical.
Ionic liquids in analytical chemistry and their applications in mass spectrometry 13 September 2006 Farzad Fani Pakdel.
Figure 1S 500 nm 200 nm 2 μm. Figure 2S-1 (+)-Mode LDI-MS spectra obtained with a) acridine (M.W. = 179) and b) perdeuterated acridine dissolved in toluene.
INF380 - Proteomics-51 INF380 – Proteomics Chapter 5 – Fundamentals of Mass Spectrometry Mass spectrometry (MS) is used for measuring the mass-to-charge.
MALDI demonstration Frímann, Helgi, Long, Nanna. Sample preperation The sample of interest and matrix are dissolved in a volatile solvent The sample/matrix/solvent.
Chemistry 367L/392N Macromolecular Chemistry Lecture 8.
Tunable Infrared Laser Desorption/Ionization Time-of-Flight Mass Spectroscopy of Thin Films Timothy Cheng, Michael Duncan Department of Chemistry, University.
Infrared Photodissociation Spectroscopy of TM + (N 2 ) n (TM=V,Nb) Clusters E. D. Pillai, T. D. Jaeger, M. A. Duncan Department of Chemistry, University.
Body Fluid Analysis by Surface Enhanced Raman Spectroscopy for Medical and Forensic Applications Zhe Mei and Lawrence D. Ziegler Department of Chemistry,
Separates charged atoms or molecules according to their mass-to-charge ratio Mass Spectrometry Frequently.
Infrared Resonance Enhanced Photodissociation of Au + (CO) n Complexes in the Gas Phase Joe Velasquez, III, E. Dinesh Pillai and Michael A. Duncan Department.
Jonathan Gorodetsky, Leonid Belau and Yehuda Haas Hebrew University of Jerusalem, The Farkas Center for Light-Induced Processes Acknowledgments This project.
Methodology for Molecular weight determination by MALDI instrumentation One of the application of MALDI is for the determination of the molecular weight.
2014 생화학 실험 (1) 6주차 실험조교 : 류 지 연 Yonsei Proteome Research Center 산학협동관 421호
What is Mass Spectrometry? Mass spectrometry could be considered as an analytical technique that involves the study in the gas phase of ionized molecules.
Chapter 11 Structure Determination: Mass Spectrometry, Infrared Spectroscopy, and Ultraviolet Spectroscopy.
RANIA MOHAMED EL-SHARKAWY Lecturer of clinical chemistry Medical Research Institute, Alexandria University MEDICAL RESEARCH INSTITUTE– ALEXANDRIA UNIVERSITY.
Yonsei Proteome Research Center Peptide Mass Finger-Printing Part II. MALDI-TOF 2013 생화학 실험 (1) 6 주차 자료 임종선 조교 내선 6625.
Peptide Mass Finger-Printing Part II. MALDI-TOF
MALDI-TOF MS Bergdís Björk Bæringsdóttir Daníel Arnar Tómasson
Mass Spectrometry 101 Hackert - CH 370 / 387D
Volume 65, Issue 1, Pages (January 2004)
Mass Spectrometry Obaid M. Shaikh.
Anadarko Undergraduate Fellowships for Excellence in Energy Research
S. Emonet, H.N. Shah, A. Cherkaoui, J. Schrenzel 
Time-of-Flight Mass Analyzers
Schematic of the principles of mass spectrometry (MS).
Structure Determination: Mass Spectrometry and Infrared Spectroscopy
12. Structure Determination: Mass Spectrometry and Infrared Spectroscopy Based on McMurry’s Organic Chemistry, 7th edition.
12. Structure Determination: Mass Spectrometry and Infrared Spectroscopy Based on McMurry’s Organic Chemistry, 7th edition.
12. Structure Determination: Mass Spectrometry and Infrared Spectroscopy Based on McMurry’s Organic Chemistry, 7th edition.
Figure 1 Schematic representation of a typical MALDI-MSI workflow
Volume 65, Issue 1, Pages (January 2004)
S. Emonet, H.N. Shah, A. Cherkaoui, J. Schrenzel 
Analyzing Biological and Organic Polymers by MALDI-TOF
12. Structure Determination: Mass Spectrometry and Infrared Spectroscopy Based on McMurry’s Organic Chemistry, 7th edition.
12. Structure Determination: Mass Spectrometry and Infrared Spectroscopy Based on McMurry’s Organic Chemistry, 7th edition.
Pierre P. Massion, MD, Richard M. Caprioli, PhD 
Mass Spectrometry THE MAIN USE OF MS IN ORG CHEM IS:
Presentation transcript:

Experimental  Applied Biosystems Voyager DE-STR+ MALDI-TOF MS  N2 laser (3 nsec pulse, λ = 337 nm)  Laser intensity 2104, 96% grid voltage, 100 nsec delay extraction (unless otherwise noted on individual spectra)  Linear mode  Technics Hummer VI Sputter Instrument  MALDI Plates  Applied Biosystems Gold and Stainless Steel 100 well MALDI plates  Multiple washings with tetrahydrofuran (THF), 6M nitric acid, DI water, and acetone  Metal sheets  Aluminum, brass, and copper metal sheets  Cut into ~ 1cm 2 squares and mounted onto 4 well MALDI plate  Multiple washings with THF, 6M nitric acid, DI water, and acetone  ZnO nanorods and SiO 2 nanoparticles, suspended in methanol  Polymers  Cationizing salts  Silver trifluoroacetate (AgTFA), sodium trifluoroacetate (NaTFA)  Polymer/salt mixtures dissolved in THF and vortexed. 0.5 μL spotted on MALDI plates or metal sheets and allowed to air dry.  Spectra analyzed by Polymerix ® and Data Analysis ® Nontraditional Matrices for Polymer Analysis by MALDI-TOF Mass Spectrometry Justin R. Engle, J. Ray Runyon, and S. Kim R. Williams Department of Chemistry and Geochemistry, Colorado School of Mines, Golden, CO 80401, Abstract Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) has been used for the analysis of polymers. Organic matrices such as dithranol, trans-retinoic acid, and 2,5-dihydroxybenzoic acid (DHB) are commonly used to facilitate desorption and ionization of polymers. However, the use of these organic matrices leads to matrix signals at m/z values below ~1000 Daltons. Consequently, the usefulness of this low m/z region is severely compromised (Figure 1). MALDI-TOF MS of biological samples and 200 Daltons poly(ethylene glycol) has been done with nanosized inorganic particles (instead of organic matrices) [1,2]. Various metal substrates (no matrix) have also been used for protein analysis with an infrared laser [3]. Our study extends these concepts of inorganic particles and matrixless MALDI-TOF MS to low molecular weight organosoluble polymers. References: [1] Q. Zhang, H. Zou, Z. Guo, Q. Zhang, X. Chen, J. Ni. Rapid Commun. Mass Spectrom. 15, (2001). [2] T. Kinumi, T. Saiso, M. Takayama, H. Niwa, J. Mass Spectrom. 35, (2000). [3] D. Rousell, S. Dutta, M. Little, K. Murray, J. Mass Spectrom. 39, (2004). AnalyteSupplier*Nominal MWPolydispersity Polystyrene 800 (PS 800) APSCM w 826 M n Polystyrene 2200 (PS 2200) PEM w 2200 Poly(ethylene glycol) 700 (PEG 700) APSCM w 700 M n Poly(ethylene glycol) 1690 (PEG 1690) APSCM w 1690 M n Objectives Decrease matrix mass signals below ~1000 Dalton and perform MALDI-TOF MS analysis of low molecular weight polymers.  Use inorganic particles (SiO 2 nanoparticles, ZnO nanorods, and gold sputter) in lieu of organic matrices.  Eliminate matrix altogether and evaluate the feasibility of MALDI-TOF MS analysis of low molecular weight polymers directly off MALDI plates (gold and stainless steel) and metallic substrates (aluminum, brass, and copper). Figure 1: 2,5-DHB (9.85 mg/mL in THF); PS 800 (1.12 mg/mL in THF); AgTFA (4.88 mg/mL in THF). Polymer:Matrix:Salt :: 1:9:4. Laser intensity Figure 1 shows significant matrix interferences below ~1000 Daltons. Two PS 800 adduct series can be discerned. The 104 m/z difference is indicative of PS oligomer. Figure 2: PS 800 (4.99 mg/mL) with AgTFA (5.10 mg/mL) in 1:1 (v/v) on clean aluminum sheet. At peak 892 m/z: resolution - 195; S/N :1. Calculated M w 939 and M n 822 Figure 4: PS 800 (4.99 mg/mL) with AgTFA (5.10 mg/mL) in 1:1 (v/v) on brass metal sheet. At peak 996 m/z: resolution - 182; S/N :1 Calculated M w 866 and M n 746. Figure 3: PS 800 (4.99 mg/mL) with AgTFA (5.51 mg/mL) in 1:1 (v/v) on clean copper metal sheet. At peak 891 m/z: resolution - 162; S/N :1. Calculated M w 744 and M n 625. Figures 2 thru 4 show successful MALDI analysis of PS 800 on aluminum, copper and brass metal sheets. The signal:noise ratios are clearly improved in all cases. The peaks at m/z 107, 214, and 326 are due to silver clusters. The source of the low intensity background signals is unclear. The same metal substrates were also successful for the analysis of PEG 700 and PEG Figure 5: PS 800 (10.8 mg/mL) with AgTFA (4.89 mg/mL) in 1:1 (v/v) on Clean 100 well Gold MALDI plate. Laser intensity 1926, 200 nsec delay. At peak 794 m/z: resolution 146; signal to noise 89.3 to 1. Calculated M w 692 and M n 647 Figure 6: PS 800 (4.99 mg/mL) with AgTFA (5.42 mg/mL) in 1:1 (v/v) on Clean 100 well Stainless Steel MALDI plate. Laser intensity At peak 792 m/z: resolution 191; S/N to 1. Calculated M w 676 and M n 610 Figure 7: PS 800 (4.99 mg/mL) with AgTFA (5.51 mg/mL) in 1:1 (v/v) on gold sputtered film with aluminum metal sheet backing. At peak m/z: resolution - 103; S/N :1. Calculated M w 1189 and M n Figure 8: PS 800 (0.25 mg/mL) with uncoated SiO 2 nanoparticles in 1:1 (v/v) on 100 well stainless steel MALDI plate. Laser intensity 2400, 60% grid voltage, 10 ns delay extraction. At peak 690 m/z: no peak resolution; S/N 50.9:1. Calculated M w 864 and M n 780. Acknowledgements  NSF-CHE  Dr. Dean Lee, Chemistry and Geochemistry Dept., Colorado School of Mines  Dr. Frank Osterloh Chemistry Department University of California Davis for ZnO and SiO 2 nanoparticles Conclusions  Low molecular weight polymers can be analyzed by MALDI-TOF MS without using traditional organic matrices.  Gold sputtering and uncoated SiO 2 nanoparticles worked well for PS800 while ZnO proved successful for PEG.  The use of metal substrates and MALDI plates in the absence of matrix allowed analysis of Ps and PEG polymers with molecular weights below 1000 Daltons. PS 800 with 2,5-DHB PS 800 on Various Metal Substrates PS 800 on MALDI Plates PS 800 with Inorganic Particle Matrix Figures 5 and 6 show PS 800 on gold and stainless steel MALDI plates, respectively. In Figure 5, several peaks are attributed to gold (197, 394, and 591 m/z) and silver (107, 214, and 321 m/z) clustering. The stainless steel plate consistently showed good results for PEG 700 and PEG 1690 whereas the MALDI gold plate produced inconsistent results for the analysis of polymers. Figures 7-10 show the use of inorganic particles for MALDI analysis of polymers. Gold sputtering led to successful MALDI of PS 800 and 2200 and PEG 700 and Possible carbon contamination can be seen below ~500 m/z from the Hummer Technics VI instrument. The uncoated SiO 2 nanoparticles, Figure 8, display multiple mass signals below ~500 m/z not associated with the polymer. The uncoated SiO 2 nanoparticles were also successfully used with PEG 700 and The ZnO nanorods were unsuccessful in the analysis of PS800 but successful for PEG 700 and PEG 1690 (Figure 10). *APSC – American Polymer Standards Corporation, PE – Perkin Elmer Figure 9: PS 800 (0.25 mg/mL) with ZnO nanorods in 1:1 (v/v) on 100 well stainless steel MALDI plate. Laser intensity 2200, 60% grid voltage, 10 ns delay extraction. Figure 10: PEG 700 (0.53 mg/mL) with ZnO nanorods (in methanol) in 1:1 (v/v) on stainless steel MALDI plate. Laser intensity 1802; 94% grid voltage. At peak m/z: resolution ; S/N :1. Calculated M w 560 and M n Well MALDI Plate Aluminum, Brass and Copper substrates