HYDROGEN BONDS IN DNA NHO Distance between the N and O Covalent bond hydrogen bond Bond angle between N, H and O.

Slides:



Advertisements
Similar presentations
Chapter 6: covalent compounds
Advertisements

Puentes de Hidrógeno. Intermolecular Forces 11.2 Intermolecular forces are forces between molecules. Intramolecular forces hold atoms together in a molecule.
Sections 11.4 – 11.5 Intermolecular Forces
Chiral HPLC.
Alcohols can be thought of as organic relatives of water:
1 Hydrogen Bonding is a special type of dipole-dipole interaction involving compounds with O-H or N-H bonds. Hydrogen bonding (or H-bonding) is NOT a covalent.
2.4 Intermolecular Forces
Liquids and Solutions Ch. 14 and 15.
2.3 Molecular Compounds Bonding and Properties LO: I understand how the bonding present affects the physical properties of a molecular substance.
Section 5.5—Intermolecular Forces
Intermolecular Forces
Basic Chemistry Copyright © 2011 Pearson Education, Inc. Chapter 10 Structures of Solids and Liquids 10.4 Attractive Forces between Particles 1.
Molecular Polarity & Intermolecular Forces
Bonding What exactly is a bond? Depends…Ionic or Covalent? Polar? NON-POLAR COVALENT=> equal sharing of electron pair 0 < ∆EN < 0.4 POLAR COVALENT= unequal.
Sp 3 Components of the early atmosphere H2H2 CH 4 NH 3 H 2 O Life prefers lighter atoms (1) More abundant on Earth (2) Stronger bonding between small atoms.
Carbon Compounds Organic Chemistry. Structural Models and Diagrams Used to show the structure of the atoms in the molecule Isomers: Different structures.
Section 12.1 Characteristics of Chemical Bonds 1.To learn about ionic and covalent bonds and explain how they are formed 2.To learn about the polar covalent.
Functional Groups.
Why do some solids dissolve in water but others do not? Why are some substances gases at room temperature, but others are liquid or solid? The answers.
Lecture: Molecules and Compounds. Compounds and Molecules: A chemical structure that is made of two or more atoms that are bonded together.
Hybridization Polarity Intermolecular Forces SCH4U.
The Structure of Matter: Compounds & Molecules Chemical bond - the attractive force that holds atoms or ions together Chemical bond - the attractive force.
UNIT 4 IMF’S & OCTET RULE EXCEPTIONS. Intermolecular forces are not bonding forces. They do not result in the formation of chemical compounds. They are,
Hydrogen Bonding SWBAT: Draw hydrogen bonds between two molecules.
Properties of Molecular and Ionic Compounds SCH3U1 Winter 2015.
Why do some solids dissolve in water but others do not? Why are some substances gases at room temperature, but others are liquid or solid? The answers.
Intermolecular Forces. Relative Magnitudes of Forces The types of bonding forces vary in their strength as measured by average bond energy. Covalent bonds.
Why do some substances dissolve and others not? Intermolecular Forces.
Chapter 12 Pages Why do snow flakes form 6 sided shapes?
Molecular Geometry Chapter 6 Section 5 Molecular Geometry Properties of molecules also depend on their shape Polarity of each bond and geometry on molecule.
Aim: What attraction forces exist among neighboring molecules? I.O.SWBAT: 1)Use the KMT to explain the differences in motion of particles in the gas, liquid,
Bonding. Bonding and attractions Bonding – Sharing or transfer of electrons Attractions – Negativity of one atom/molecule attracted to positivity of another.
An element is a substance that is made from one kind of atom only. It cannot be broken down into simpler substances. An element atom.
9-9 Intermolecular Forces (IMFs) ~ (Section 14.3) And you.
Intermolecular Forces
Overall goal: Atomic Structure Chemical Bonding 3D Molecular Structure
The Basic Chemistry of Life - Biochemistry, Bonds, Molecules, Reactions SGN 2 To really have an understanding of biology requires an appreciation of, and.
Types of Chemical Bonds Chapter 8
Intermolecular Forces
Intermolecular Forces Notes
Chemistry-Part 2 Notes Chemical Bonding
Intermolecular Forces
Physical Properties Physical properties such as boiling point and solubility are largely determined by intermolecular forces.
Chapter 5-1 The Structure of Matter
Intermolecular Forces
Intermolecular Forces
Introduction to Bonding
Chemistry Chemical Bonds.
1.3 Molecular Elements Diatomic Elements
Chemical Bonding.
Intermolecular Attractions
Intermolecular Forces
Intermolecular Forces
Covalent Bonds Electrons are shared.
Chapter 6 Bonding.
Molecules 3.3.
Intermolecular Forces
Chemical Bonds What holds a compound together?
UNIT SELF-TEST QUESTIONS
Molecules 3.3.
Aim: What attracts molecules to each other?
BIOCHEMISTRY.
Molecules 3.3.
Intermolecular Forces
Functional Groups and Their Properties
Chapter 8 Covalent Bonding 8.4 Polar Bonds and Molecules
Intermolecular Forces
Covalent Bonds Electrons are shared.
Covalent Bonding & Intermolecular Forces
Intermolecular Forces
Presentation transcript:

HYDROGEN BONDS IN DNA NHO Distance between the N and O Covalent bond hydrogen bond Bond angle between N, H and O

NHO HYDROGEN BONDS IN DNA N H N H N O C GA T H N O N H N

HYDROGEN BONDS IN DNA The factors affecting the strength of a hydrogen bond are: - interatomic distances - directionality - linearity For instance, for calculating the H-bond between N-H and O we can use the folowing expression (Kcal/mol): Where (R NO) is the actual distance between the N and O atom A collinear configuration of the three atoms would have the lowest potencial energy

HYDROGEN BONDS IN DNA Hidrogen bond energy between N-H and O when: = 180º

The "H-bond effect" is an extremely important factor (by sheer numbers!) in intermolecular attraction & has a profound effect on many chemical & physical properties of organic compounds with OH, NH HYDROGEN BONDS IN DNA

In biochemistry, inter-molecular H bonds are crucial for specific molecular recognition and intra- molecular H bonds are important in the maintenance of the 3-D structures HYDROGEN BONDS IN DNA