Comparing 3D descriptors for local search of craniofacial landmarks F.M. Sukno 1,2, J.L. Waddington 2 and Paul F. Whelan 1 1 Dublin City University and.

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Presentation transcript:

Comparing 3D descriptors for local search of craniofacial landmarks F.M. Sukno 1,2, J.L. Waddington 2 and Paul F. Whelan 1 1 Dublin City University and 2 Royal College of Surgeons in Ireland

Objective and Contents Objective  To compare the performance of 3D geometry descriptors For the accurate localization of facial landmarks In a quantitative manner that relates to the localization error Contents  Context and descriptors  Expected local accuracy Curves and comparison method  Results Evaluation of 6 geometric descriptors

Context Craniofacial geometry has been suggested as an index of early brain dysmorphogenesis in neuropsychiatric disorders  Down syndrome  Autism  Schizophrenia  Bipolar disorder  Fetal alcohol syndrome  Velocardiofacial syndrome  Cornelia de Large syndrome ... Shape differences can be subtle  Need for highly accuracy analysis

Craniofacial landmarks Manual annotations from: R. Hennessy et al. Biol Psychiat 51 (2002) 507–514

Evaluated descriptors Distance-based  Spin Images (SI) A. Johnson et al. IEEE T Pattern Anal 21 (1999) 433–449  3D Shape Contexts (3DSC) A. Frome et al. In: Proc. ECCV (2004) 224–237  Unique Shape Contexts (USC) F. Tombari et al. In: Proc. 3DOR (2010) 57–62 Orientations-based  Signature of Histograms of Orientations (SHOT) F. Tombari et al. In: Proc. ECCV (2010) 356–369  Point Feature Histograms (PFH) R. Rusu et al. In: Proc. IROS (2008) 3384–3391  Fast Point Feature Histograms (FPFH) R. Rusu et al. In: Proc. ICRA (2009) 3212–3217

Distance-based descriptors Spin Images (SI)  2D histogram of distances  The normal set the reference  Rotationally invariant 3D Shape Contexts (3DSC) 3D histogram (radius, elevation and azimuth) The normal sets the reference Azimuth uncertainty Unique Shape Contexts (USC) Fully 3D reference system

Orientation-based descriptors Signature of Histograms (SHOT):  Coarse bin system as 3DSC and USC  Each bin is described with a histogram of directions (w.r.t. the ref normal). Point Feature Histograms (PFH):  3D Histogram of relative orientations of every pair of points in the neighbourhood  High computational load: O(N 2 ) against O(N) of all other descriptors Fast Point Feature Histograms (FPFH)  As PFH but only pairs with the central pt

Similarity maps with geometry descriptors Cross correlation of a template with every mesh vertex We can generate a colour-coded similarity map Nose tipEye corners (inner) Mouth corners High similarity Low similarity Example of similarity maps using spin images

Expected Local Accuracy Is the expected distance from the vertex obtaining the maximum score to the ground truth position, but only searching on a neighbourhood of radius r d

Expected Local Accuracy Is the expected distance from the vertex obtaining the maximum score to the ground truth position, but only searching on a neighbourhood of radius r

Expected Local Accuracy Is the expected distance from the vertex obtaining the maximum score to the ground truth position, but only searching on a neighbourhood of radius r

Expected Local Accuracy

Examples for the nose tip (prn)

Inner-eye corners (en)

Inferior earlobe (oi)

Performance with random choice From the definition of expected local accuracy: If we assume a random descriptor (i.e. a uniformly distributed probability density for all points within the search radius):

Expected local accuracy curves

First flat region or plateau PLATEAU Value Limits

Results Test set of 144 facial scans  With expert annotations  Tests using 6-fold cross validation Results organized in tables  In each row we compare the 6 descriptors  The first plateau is used for comparison Value and limits (n.p = No Plateau if not present)  Best descriptor per landmark highlighted in boldface No significantly different results from the best are indicated with an asterisk  Best neighbourhood size indicated by symbols 20mm (  ), 30mm (–) and 40mm (  )

Expected Local Accuracy (1/2)

Example: mouth corner (ch)

Best scale: descriptor- and landmark-trends

Expected Local Accuracy (2/2) The full tables are available at

Conclusive remarks We present a study of local accuracy to compare geometry descriptors in 3D  We define expected local accuracy curves  Good descriptors tend to have a plateau in these curves  The plateau is identified as the main feature of those curves and it facilitates comparison of the descriptors We evaluated 6 descriptors  Performance showed strong dependency on the chosen landmark  No descriptor clearly dominated over the rest  3DSC, SI and SHOT achieved better performance than USC, PFH and FPFH

The Face3D project The project is funded by the Wellcome Trust The partners in the project are: The University of Glasgow Royal College of Surgeons in Ireland Dublin City University Institute of Technology, Tralee University of Limerick THANK YOU FOR YOUR ATTENTION