EUCCONET International Workshop Bergen, 15th – 17th June 2011 Arild Sunde MoBa Generation Linkage.

Slides:



Advertisements
Similar presentations
Generation R Study Claudia Kruithof, MSc datamanager Generation R EUCCONET workshop june 2011 – Record Linkage.
Advertisements

Bill Roettger Feature Updates for HCV-ID. Overview For Patients Collect: - Patient Information - Insurance Cards - Acceptance of Data Privacy Policy -
MEDICAL SERVICES CORPORATION Recipients MSC MSC User will print forms from any Windows application to the Reform Print Driver A A B B Reform Print Driver.
Collecting and Reporting EHDI Data in New Jersey Kathryn Aveni, RNC, MPH Early Hearing Detection and Intervention Program, New Jersey Department of Health.
Norway, governance and research databanks Reidar K. Lie, MD, PhD University of Bergen, Norway.
Matching PLASC and ALSPAC PLASC/NPD User Group Workshop 13 th September 2006 Andy Boyd David Herrick
ADABAS to RDBMS UsingNatQuery. The following session will provide a high-level overview of NatQuerys ability to automatically extract ADABAS data from.
Recruitment Booster.
EUCCONET International Workshop Bergen, 15th – 17th June 2011 Nina Hagesæther.
EDRN’s Validation Study Information Management System Developed for EDRN by the DMCC Cancer Biomarkers Group Division of Cancer Prevention Jet Propulsion.
ICWA NOTICING DOCUMENTATION IN CWS/CMS
Click a NOTUS Suite- product for a short description NOTUS REGIONAL NOTUS Regional helps regions perform the tasks related to the reimbursement of providers.
Spillman Sentryx 6.0.
Project Update : Claims/Clinical Linkage Project MHDO Board of Directors June 6, 2013.
Peoplesoft Fundamentals David Lewis 10/18/02 (adapted from Psoft Training Materials)
© 2013 The McGraw-Hill Companies, Inc. All rights reserved. Chapter 9 Tests, Procedures, and Codes.
Smart HR Need a subtitle Presented by Marc Levinson & Swetha Lingala.
SMT Proprietary and Confidential
Salesforce.com Web to Leads. Unit Name Web to Leads A web to lead provides users the ability to gather information from their website visitors which automatically.
Instructions and forms
TNKids Duplicate Social Security Number. The following graphics are designed to help you to navigate through this Computer Based Training. The navigational.
MEDICAL THERAPY PROGRAM WEB BASED MODULE. Background History of the MTP module Rolled out Phase 1 – 2002 Began Phase 2 – 2005 Implementation of Phase.
Databases & Data Warehouses Chapter 3 Database Processing.
Presented By: Product Activation Group Syndication.
ChartWare Product Tour. Upon Log-in, view all reminders. Items in red are past-due. Use this for “internal messaging”
Software Configuration Management (SCM)
World Bank, Africa Region, Africa Household Survey Databank - The World Bank - Africa.
If you are very familiar with SOAR, try these quick links: Principal’s SOAR checklist here here Term 1 tasks – new features in 2010 here here Term 1 tasks.
IBM Rhapsody Simulation of Distributed PACS and DIR systems Krupa Kuriakose, MASc Candidate.
Developing Workflows with SharePoint Designer David Coe Application Development Consultant Microsoft Corporation.
10-1 aslkjdhfalskhjfgalsdkfhalskdhjfglaskdhjflaskdhjfglaksjdhflakshflaksdhjfglaksjhflaksjhf.
Data management in the field Ari Haukijärvi 2nd EHES training seminar.
AOHC Privacy Meeting Jan. 30 th, Security Roles  AOHC Standard User Roles Nightingale has worked with AOHC to create a list of standard user roles.
Sam Houston State University's IR Office Organization System.
Material and methods Background and purpose For more information on The Norwegian Mother and Child Cohort Study go to :
Items 14.2 Seminar 5 March Seminar Items 2 Session Agenda Item record - structural changes Call No. Filing Item sorting routines Item Form.
1 OPOL Training (OrderPro Online) Prepared by Christina Van Metre Independent Educational Consultant CTO, Business Development Team © Training Version.
Meet and Confer Rule 26(f) of the Federal Rules of Civil Procedure states that “parties must confer as soon as practicable - and in any event at least.
Training Guide for Inzalo SOP Users. This guide has been prepared to demonstrate the use of the Inzalo Intranet based SOP applications. The scope of this.
BNR – Stroke: data entry and data management CAREC/PAHO Curacoa,15-16 November 2010 Gina Pitts, BNR-CVD Registrar Chronic Disease Research Centre, Jemmotts.
The european ITM Task Force data structure F. Imbeaux.
Welcome to the Searching for Clients lesson for the North Carolina Immunization Registry. This lesson is intended for all User Roles.
The County of Fresno eContracts System Tracking your contracts is just a few clicks away!
Dashboard: has been completely overhauled – View your completion status, number of total records, and the latest Crop Monitor at a glance – Help files.
PowerSchool Update Rosalyn Galloway Director, Student Information System.
Rev.04/2015© 2015 PLEASE NOTE: The Application Review Module (ARM) is a system that is designed as a shared service and is maintained by the Grants Centers.
EMAS Walkthrough Registration, registration updates and consultation.
ICT in Healthcare. Electronic prescription service GPs and nurses can send electronic prescriptions to a dispenser (pharmacy) of the patients choice.
3 Copyright © 2004, Oracle. All rights reserved. Working in the Forms Developer Environment.
RIPE ncc 25th June CENTR Workshop The RIPE NCC Request Tracking System Maldwyn G.T. Morris RIPE NCC.
Your Guide. Table of Contents Welcome to MyChart…………………………….…..3 How to Sign Up………………………………… MyChart Homepage (navigating through MyChart)……...
© 2013 The McGraw-Hill Companies, Inc. All rights reserved. Chapter 10 Productivity Center and Utilities.
ACIS Introduction to Data Analytics & Business Intelligence Database s Benefits & Components.
Data Management Seminar, 8-11th July 2008, Hamburg WinW3S – Listing & Sampling Teachers.
Data Management Seminar, 8-11th July 2008, Hamburg WinW3S – Listing Students and Assigning Booklets.
12 Copyright © 2009, Oracle. All rights reserved. Managing Backups, Development Changes, and Security.
Data Coordinators Conference – 2014 Laura Marroquin CASEWORKER/JCMS Specialist Everything New Data Coordinators Should Know.
The 2011 Census: Estimating the Population Alexa Courtney.
Chapter 11: Sequential File Merging, Matching, and Updating Programming Logic and Design, Third Edition Comprehensive.
RaDaR Rare Disease Registry Melanie Dillon RaDaR Project Facilitator.
Project management Topic 8 Configuration Management.
Building Preservation Environments with Data Grid Technology Reagan W. Moore Presenter: Praveen Namburi.
2015. The MoBa cohort Aim: To find causes of disease and factors involved in health related issues in a lifespan A large population based pregnancy cohort.
ATRK & CMC—The Perfect Pair. Presentation Outline Brief Introduction CMC Screen & The 4 Definitions of Communications Management ATRK Screen Tying together.
Improving health for the underserved
EDRN’s Validation Study Information Management System
the prospective cohort study of Thai children
Nicolás J. I. Rodríguez & Arild Mellesdal
Best Practices in Higher Education Student Data Warehousing Forum
Presentation transcript:

EUCCONET International Workshop Bergen, 15th – 17th June 2011 Arild Sunde MoBa Generation Linkage

Outline The MoBa Data Linkages we do Generation linkage

Questionnaires Responses Q1 (17 weeks) Q2 (22 weeks) Q3 (30 weeks) Q4 (6 months) Q5 (18 months) Q6 (3 years) Q5 (5 years) Q7 (7 years) Q8 (8 years)3.300 Q Father (17 weeks) MoBaFlu15.000

Biological Material Full blood EDTA Plasma EDTA RNA (child) DNA Urine (mother week 18) Sample typeCount K11-Blood from pregnant woman, week K12-Blood + Urine from pregnant woman, week K2-Blood from mother after birth M-Blood from father, week 18 in pregnancy B- Cord blood from newly born child Others: A, KA, MA, W23, W

MoBaStudy - Generic logistics and LIMS system  Participant administration  Questionnaire dispatchments based on user defined rules  Sample management  Sample retrieval  Communicates with laboratory robots  Reports  Dynamic letters (Merge letters defined by users)  Standard reports  User defined reports  All user interface labels, menus and messages are defined in the database  User rights (visibility, update access) to all interface components are defined in the database  Change/audit log for all database fields  Code 128 Barcode labels for questionnaires, sample tubes, racks, shelves and freezers  MSSQLServer 2005 database  Client application developed in VisualStudio 2005 (.NET/C#)  PDA version for Sample retrievals – PDALab  From 2011: Communication with RTS A4 Sample-Store™  Dual language support  Used by 3 independent studies as of September 2010  Easy setup for new studies

MoBaData – Generic questionnaire data management system  Maintains data and metadata for all questionnaires  Linked to MoBaStudy participants by barcode  Automatically create storage tables based on Readsoft Eyes & Hands ™ description files  Automatically create storage tables based on a data files  Track questionnaire versions and linking between versions  Loading data files while controlling record and field structure according to questionnaire definition  Meta data in two languages  Quality control  User rights  Reports  Define, test and modify quality control rules  View questionnaire images and compare to data  View scanned data by marking a field on the image file  Data extraction (shopping list)  Create SAS and SPSS data files with metadata (variable- and value labels)  Tracks data changes  Oracle 11 database  Client application developed in Visual Studio 2005 (.NET/C#)  Easy setup for new studies

Linkage key - SSN Since 1964 every citizen of Norway has a unique Social Security number DDMMYY##### Also available to temporary residents, work permit holders etc. XML message sent from hospital after birth Used for all records; bank, school, insurance, hospitals etc.

Norwegian Population Registry-DSF SSN, and history Mother’s and father’s SSN Date of birth Name, and history Maiden name Address, and history Address code Maritial status Live status

Keep track of individuals Mother’s SSN from hospital ultra sound lists Father’s SSN from consent form Child’s name from linkage to DSF and Medical Birth Registry-MFR Mothers and fathers SSN Expected date of birth -160, +30 days Monthly updates from DSF Store changes of all fields in our database

Linkages Routine link for quality control and updates DSF, MFR Included in the consent MFR located here Local copy of DSF Project specific linkages Researchers order MoBa Data linked to their data or other registries Requires application to the Regional Ethical committee Information letter must be sent to participants

We receive data with SSN. Link and add MoBa data. We send our participant’s SSN with an ID and get back data for the participants and add MoBa data We send our participant’s SSN with an ID to a registry. The registry identifies the candidates. The registry and we send data for the candidates with the same ID to the researcher Each data source pseudonymised before linkage A third party does the linkage. Direct access to the data for linkage Data sent to researchers is always deidentified or anonymized Ways we link to other registries

National Population Registry Medical Birth Registry National Twin Registry Norwegian Patient Registry Cause of Death Registry Norwegian Prescription Database Norwegian Cancer Registry MIDIA NewGeneris And many more...

Generation linkage MoBa–Norwegian Mother and Child Cohort participating pregnancies 11+ questionnaires, avg. 16 pages variables Biological material ( Blood, DNA,RNA,plasma,Urin) MBR-Norwegian Medical Birth registry Started 1967 Information about mother’s health before and during pregnancy, smoking, use of folic acid, occupation, use of medication, diabetes, epilepsy, information on the birth, procedures and information on the child Mother, father and child’s unique SSN

Aim Affects of previous generation’s and siblings sicknesses Affects of heredity and environment What is linked All MoBa participants’ questionnaires and MBR record are linked to all siblings MBR record, and each of the parents MBR records.

Gives us health information about: MoBa children Both parents Grandparents Full and half siblings Consent and reservation Linkage of participant to MBR is included in the MoBa consent form Linkage to siblings and parents required application to the Regional Ethical committee Written information had to be sent to all participants Option for reservation against the linkage (total of 35) Data anonymized after linkage

Deterministic linkage Both MoBa and MBR contains SSN of the child, mother and father (if available) The National Population Registry used for cross checks Requires 100% match on SSN

Results participating children with MBR birth record mothers with MBR birth records fathers with MBR birth records non participating siblings from mother non participating siblings from father mothers with no MBR birth record fathers with no MBR birth record

Each person was given a role: Child: Participating child Mother: Mother of a participating child Father: Father of a participating child Sibling: Sibling of a participating child

Roles RoleCount Child Mother Father Sibling Child/Sibling Mother/Sibling 222 Father/Sibling 110 Mother/Father 2