Chemotaxis and Cellular Slime Molds Junping Shi. Basic diffusion mechanism.

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Presentation transcript:

Chemotaxis and Cellular Slime Molds Junping Shi

Basic diffusion mechanism

You may have noticed these without realizing what are: if you see a slimy surface on your shower curtains or walls or a dewy layer on your lawn.... More photos: Video:

Growth of slime mold In its native state a slime mold population consists of hundreds or thousands of unicellular amoeboid cells, and each one moves independently and feeds on bacteria. When food becomes scarce, the amoebae enter a phase of starvation. An initially uniform cell distribution develops a multicellular mass. Cells are attracted to these loci called aggregate and move towards them. Eventually they become a sluglike multicellular mass. The sluglike collection of cells undertakes a sequence of shapes including that of a dome. And at the end, the result is a slender, beautifully sculptured stalk bearing acapsule at its top. (It is called a sporangiophore.)

Life cycle of slime molds

Question : What cause cells to aggregate, and how do cells know where an aggregation center should form? The starved slime mold amoebae secrete a chemical that attracts other cells. It is called cyclic AMP (cAMP), whose role is that of an intracellular messenger. To model the aggregation of slime mold, the following assumptions are made (Keller-Segel, 1970): Individual cells undergo a combination of random and chemotactic motions towards cAMP. Cells neither die nor divide during aggregation. cAMP is produced in a constant rate by each cell. The rate of degradation of cAMP depends linearly on its concentration. cAMP diffuses passively over the aggregation field.

Initially, a and c are both in a uniform state, which is presumably the equilibrium state. IF the constant equilibrium is not stable, then under a small perturbation, the solution may go towards a spatially non-constant equilibrium solution. That implies an aggregation may occur, and $u$ will become a function which concentrates at one point or several points. Mathematical question : for which parameter values, the equilibrium solution is unstable, and what is the unstable mode?