Pankaj Jaiswal, Laurel Cooper, Laura Moore, RCN-Phenotype (Plant Group), Gramene RCN-Phenotype Meeting Bioshepere 2, Tucson, AZ February 21, 2014 Plant.

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Presentation transcript:

Pankaj Jaiswal, Laurel Cooper, Laura Moore, RCN-Phenotype (Plant Group), Gramene RCN-Phenotype Meeting Bioshepere 2, Tucson, AZ February 21, 2014 Plant Experimental Conditions Ontology

Long et al. Plant, Cell & Environment, Volume 29, Issue 3, Pages XY Leaf phenotypes depending on its position and interaction with the environment

Common Phenotype and Pathways under contrasting treatments is_a EO: : abiotic treatment is_a EO: : radiation regimen is_a EO: : light regimen is_a EO: : radiation quantity regimen is_a EO: : light quantity regimen is_a EO: : intermittent light regimen is_a EO: : Photoperiod regimen is_a EO: : long day length regimen is_a EO: : short day length regimen

Plant Experimental Conditions Ontology plant treatment (EO: ) seasonal environment (EO: ) ecological environment (EO: ) biotic plant treatment (EO: ) abiotic plant treatment (EO: ) gaseous environment (EO: ) gravity (EO: ) radiation regimen (EO: ) temperature environment (EO: ) water environment (EO: ) chemical plant treatment (EO: ) plant growth medium (EO: ) Study type (EO: ) greenhouse study (EO: ) laboratory study (EO: ) field study (EO: ) * growth chamber study (EO: ) GAZ ENVO ChEBI Taxonomy