Cardiovascular Continuum Sampling from Extremes Padmanabhan S et al. PLoS Genet 2011
Cardiovascular Continuum Sampling from Extremes Padmanabhan S et al. PLoS Genet 2011
Cardiovascular Continuum UMOD Gene Padmanabhan S et al. PLoS Genet 2011
Cardiovascular Continuum UMOD: a Novel Hypertension Candidate Gene Padmanabhan S et al. PLoS Genet 2011
Monogenic TraitsUMOD Gene Köttgen A et al. Nat Genet 2009
Monogenic Traits Padmanabhan S et al. Hypertension 2014 Uromodulin and Blood Pressure
Monogenic TraitsBlood Pressure in Umod +/+ (WT) and Umod −/− (KO) Graham LA et al. Hypertension 2014
Monogenic Traits Graham LA et al. Hypertension 2014 Umod +/+ Umod -/- Salt Sensitivity in Umod +/+ (WT) and Umod −/− (KO)
Monogenic Traits Graham LA et al. Hypertension 2014 Pressure Natriuresis Curves
Monogenic Traits What have we learned from GWAS?
Monogenic Traits New Targets? What Have we Learned from GWAS?
NHGRI GWA Catalog Published Genome-Wide Associations through 12/2012 Published GWA at p≤5X10 -8 for 17 trait categories
Monogenic TraitsUromodulin? Padmanabhan S et al. Hypertension 2014
Monogenic Traits Risk Prediction/Stratification? What Have we Learned from GWAS?
Monogenic TraitsRisk Prediction? Padmanabhan S et al. Trends Genet 2012
Monogenic Traits No direct genetic links between CKD and Hypertension (Exception: UMOD) What Have we Learned from GWAS?
Monogenic Traits Current and future strategies
Thomas SR 2009 Monogenic Forms of Hypertension
Cardiovascular Continuum Detection of Rare/Private Mutations Lifton RP et al. Nat Genet 2008
Cardiovascular Continuum Detection of rare/private mutations Lifton RP et al. Nat Genet 2008
Rare (private) mutations could explain the "missing heritability", i.e. heritability that is not explained by common genetic variants. "Missing Heritability"
Systems Biology and "Omics" DNA mRNA Protein Metabolites small molecules Proteomics Metabolomics Genomics Transcriptomics miRNAs
Monogenic Traits DNA MethylationHistone Modification Non-coding RNAs, microRNAs Epigenetics Friso S et al. Translat Res 2014
Cardiovascular Continuum Dzau V et al. Circulation 2006 Risk factors Oxidative and mechanical stress Inflammation Early tissue dysfunction Atherothrombosis and progressive CV disease Tissue injury (MI, stroke, renal insufficiency, peripheral arterial insufficiency) Pathological remodeling Target organ damage End-organ failure (CHF, ESRD) Death Altered gene expression Altered protein expression Genome
BHF Glasgow Cardiovascular Research Centre
Log Rank (Mantel-Cox) P=0.021 CAD Score: Survival Analysis in ASCOT < Mean > Mean Brown C et al. SCF 2013
Collagen alpha-1(II) chain
Collagen alpha-1(III) chain
Roscioni SS et al. Diabetologia 2013 Normo MicroMicro Macro Prediction of Diabetic Nephropathy
Roscioni SS et al. Diabetologia 2013 Normo NormoNormo MicroMicro MicroMicro Macro Prediction of Diabetic Nephropathy
WTCCC Why did WTCCC find "hits" for many diseases, but not for hypertension?
WTCCC. Nature 2007 Cases and Controls in WTCCC
If 5% of controls would meet the definition of cases, then loss of power of the GWAS is approximately the same as that due to the reduction of sample size by 10%. "Caseness" of Controls WTCCC. Nature 2007
Challenges Possible caseness of controls Accurate definition of the phenotype Precise assessment of the phenotype Multiple pathways, multiple genes What can be done?
Cardiovascular Continuum Increasing the Sample Size OR=1.5
CHARGE Consortium Levy D et al. Nat Genet 2009
CHARGE Consortium: 29,136 Subjects Levy D et al. Nat Genet 2009